ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15046886 | MEF
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◣ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Aard
Oprd1
Gm3739
Galnt9
Ppm1n
Dab1
Adamts19
Pde3a
Mmp15
Galr3
Gm5165
Adcyap1r1
Hr
Dpysl4
Lrrc3b
Ccdc3
Tpbgl
C2cd4b
Prkcz
Rftn1
Arrdc4
Plekha7
Kcnk6
P2ry1
Ampd3
Bmp2
Nt5c2
Ina
Adcy8
Celsr1
Mad2l2
Draxin
Prtg
Bmp7
Gm2237
Cnnm3
Ccdc85c
Adamts15
Igfbpl1
A830018L16Rik
Ier5l
Lrrn4
Reln
Ascl2
Srm
Pip5k1c
Plxnd1
Cabp7
Bhlha9
Adcy9
Kcnk12
Olfr94
Cnnm1
Ret
Synm
Efcc1
Pm20d2
Insyn1
St6galnac2
Prkcq
G3bp1
Sharpin
Maf1
Gxylt2
Sema3f
Gjd3
Gatad2a
Syt10
Gm3411
Homer2
Emb
Gcnt1
C2cd4a
Rapgef5
Fgfbp3
Trnp1
Kcnq4
Kcns2
Gda
Sox18
Mroh5
Fam189a1
Shisa9
Adcy3
Slc22a3
Gfra4
Kbtbd13
Gm3752
H3c14
H3c15
Btbd11
Pakap
Prima1
Fdft1
Zfp143
Plag1
Kctd1
Htra4
Tmem179
Ak5
Fnbp1
Gipc1
Usp13
Dact2
Jpt2
Tarbp1
Rhbdl3
Kcnh1
Zmiz1
Tpcn1
Iqcd
Zfyve28
Cfap99
Dock8
Igdcc3
Nkd2
Olig1
Rnf165
Igfbp5
Wnt3a
Gbx2
Fam53c
Osbp
Fbn2
Calm3
Irx4
Zbtb16
Kctd12
Slit3
Prkaca
Kmt2a
Sall4
Dipk1c
Ptger3
Slc35f3
Adamts2
Foxi3
Nrg2
Spsb3
Nubp2
Slc24a2
Stum
Tmem132b
Fgfr1
Shisa8
Dusp2
Wnt3
Egr2
Ffar4
Tmem200c
Ap2a1
Lrrn2
Rerg
Unc5a
Kcnip3
Car7
Gm3500
Ephb1
Cdh4
Xpc
Lsm3
Eya2
Rgs9bp
Ankrd27
Ntsr2
Gm10406
Col27a1
Qrfpr
B3gat1
Rasef
Gm3488
Ajm1
Jph3
Nefl
Gabra5
B3gnt7
Gm3667
Shc2
Slc6a17
Adcy1
Hs3st4
Misp3
Unc5b
Enox1
Paip2b
Sorcs1
Zfp869
Tepsin
Ndufaf8
Scn1b
Dlk1
Galnt13
Ppp2r5a
Tppp
St6gal2
Stox1
Tcf19
Cchcr1
Fam43b
Kcnma1
Gse1
Pax6
Rasgrf2
Stip1
Ankrd54
Ttc9
Fzd10
Ednrb
N4bp2l1
B4galt6
Gldn
Col19a1
Cnot3
Ankrd34b
Foxe3
Kcnb2
Vangl1
Rpn2
Mroh8
Sp2
Gm38538
Gja3
Tmie
Als2cl
Tbl1xr1
Tmem158
Atp1b1
Lonrf2
Hmgcs1
Hmgn1
Traf2
Aktip
Wnt4
Reep1
Gsg1l
Flt3
Shisa2
Dynlt1b
Adamtsl3
Kcnq3
Spint1
Abhd2
Qrfprl
Gng13
Adgrb1
Mafa
Grid1
Gm3696
Insm2
Dock10
Samd4b
Gmfg
Irx2
Adarb1
Nsg1
Hyou1
Pkp1
Atoh8
Fam78b
Ngf
Lrrc75b
Cul2
Cacnb2
Acan
Aplp2
Lysmd2
Aph1c
Slc24a4
Hhipl1
Adora1
Rrbp1
Ky
1190005I06Rik
Rab11fip4
Htra3
Gas1
Bloc1s3
Kndc1
Arid3c
Zfp385b
Ebf4
Prex2
Efhd1
Zfp654
Cggbp1
Colgalt2
Lrrc10b
Smoc2
Fut9
Kank4
2810459M11Rik
Chst3
Ube2c
St8sia1
Cacna2d2
Pde1b
Xylt1
Grin3b
Ube2b
C130074G19Rik
Onecut3
Kit
Igfbp3
Rnf144b
Pmp22
Sema5b
Lurap1l
Tmem30b
Kank1
Zbtb7c
Fam163b
Tbx20
Atp5g1
Gpr27
Wnt5b
Sdk2
Fzd2
Pygo1
Prph
Dgka
Pdlim1
Vax1
Cnnm2
Gm3636
Drd5
Rims4
Ctnnd2
Svep1
Plxnc1
Olig2
Lypd6
Dlgap2
Fbln7
Syndig1
Arid4a
Atp8b1
Rnf125
H1f10
Ghsr
Ttc41
Hsp90b1
Kcna7
Tbx21
Pdik1l
Ripply2
Insyn2a
Nol4l
Zdhhc20
Prdm13
Cnr1
Pif1
Sstr1
Srek1ip1
Cwc27
Clip4
Dgcr8
Wscd1
Wnt1
Sertm1
Col13a1
Klf10
Fyco1
Tnfrsf21
Tgfa
Nfatc2ip
Galnt16
Npas1
Recql
Golt1b
Pdzrn3
Abtb2
Deptor
Cftr
Dolpp1
Itga4
Tmem178
Susd1
Lama1
Rap1gap2
A930017K11Rik
Sap130
Ensa
Vps26a
Cdkn3
Dennd5b
Cpm
Camk2b
Man1c1
Ptprt
Ncapd2
Mrpl51
Smtnl2
Tfdp1
Anp32a
Helt
Ppic
Nmbr
Htr1b
Arpp21
Ska2
Prr11
Sun1
Mxd4
Slc22a23
Ppp2r2c
Mvk
Mmab
Lrrc26
Slc43a1
Sptbn2
Bves
Mmd
Bhlhe23
Ift27
Cpsf1
Gm51425
Lrrfip1
Map3k5
Bmper
Zfp853
Ankhd1
Soga1
Mei1
Mxd1
Pla2g6
Snrpd2
Qpctl
Wnt7a
Plppr3
Kl
Efnb2
Dpf3
Stx16
Maea
Rassf10
Cbln4
Cdca7l
Setx
Grm6
Eva1a
H60b
Nav2
Tmem215
Kcnq1
Flcn
Nptxr
Rfx2
Kpnb1
Hsd11b2
Fam83d
Nemp1
Gabbr2
Ubald2
Zfp960
Npc2
Isca2
Tmtc4
Trim47
Pde8b
Cdkn2d
Plxna2
Cgas
Calhm6
Rps6ka5
Ap3m2
Baiap2
Far1
Rai1
Wnt2
Tnrc6b
Klf11
Cdk2ap2
Vav3
Slc30a10
Fbrsl1
Nt5e
Kcnk15
Wasf1
Cdc40
P2rx5
Plekhd1
Ptbp1
Mapt
Sst
Vps26b
Ncapd3
Ube2ql1
Adamts18
Proser2
Mreg
Pou3f1
Iqsec3
Slbp
Creb3l2
Dsg2
Slc2a13
Ednra
Clec2l
Prdm10
Fgf3
Kbtbd11
Ppm1b
Clmp
Sertad2
C2cd2
Spry1
E2f1
Dtna
Kcnq2
Klhl40
Plcb1
Rcor2
Herc2
Dcaf11
Pcbp3
Asap1
Panx1
Rgs7bp
Dll1
Tril
Dlgap4
Lingo1
Rtn4rl1
Mex3c
Limk1
Spsb4
Rab22a
1110032F04Rik
Ebf1
Megf11
C1ql1
Sfrp5
Gm10499
Kdm4b
Atxn3
Myo1b
Nrp1
Aldh1a3
Atoh7
Zbtb46
Htr6
Tjp2
Astn2
Hdac2
Egr3
Fam163a
Ltbp4
Hcn4
Col15a1
Usp12
Ptov1
Mpv17l
Zfand1
Wasf2
Dynll1
Myh9
Akap8l
Lingo2
Ppp1r26
Pou3f2
Stat3
Cebpd
Rab4b
Abcc8
Gdnf
Fam76a
Dnpep
Mtch1
Tfcp2
Ptpn14
Chn2
Pdzd2
Kcnj12
Sgk3
Rab31
Psip1
Iffo2
Kcnk3
Hes3
Nkx1-1
Cep192
Nlk
Grk6
Cntn5
Alx4
Tom1
Zfp800
Kcnk10
Pard3
Olfm1
Phyhipl
Hnrnpc
Zfyve21
Xrcc3
Adamts9
Dact1
Trim71
Efna2
Atp10a
Rnf144a
Slc26a4
Fam43a
Ap1b1
Nefh
Nes
Foxb1
Tuft1
Arsi
Slc16a14
Lingo3
Man2a1
Mme
Eya1
Wnt9b
Lamb1
Lsg1
Trim45
Maneal
Klf14
Dok7
Prrt4
Sp1
Mtch2
Dnajb1
Shisal1
Lbr
Crhr2
Lmo1
D430041D05Rik
Srpr
Foxred1
Ebag9
Wnk2
Tfap2c
Nmral1
Bcl10
Piezo2
Megf6
Foxf1
Gfra2
Sash1
Top2a
Nkx3-2
Rbm27
Ticrr
Endod1
Prmt8
Kcnn2
Svbp
Syt12
Slc47a1
Msx3
Ica1l
Cd34
Rnf5
Prkg2
Gpr25
Map6d1
Ndst2
Atxn7l3
Sema4d
Lypd1
Alkal2
Ift140
Cramp1l
Kmt5a
Sema6d
Tmem51
Paqr9
Grin2c
Pdzrn4
Rpusd1
Chtf18
Fam76b
Cep57
Tpst2
Septin11
Tef
Tafa5
Slc4a11
Hcn2
Fem1a
Ism1
Sv2c
Cnot1
Amz2
Nucb2
Popdc3
Tet2
Rbms1
Klhl23
Ece2
Pkd1
Frmd4b
Sstr2
St8sia2
Ss18
Mtmr14
Mrpl21
Ighmbp2
Nabp1
Ggct
Lrif1
Cap1
Ivd
Gpr155
Pced1b
Amigo2
Clmn
Myh10
Zbtb5
Dhodh
Adcy2
Lhx2
She
Sh3bp5
Mfhas1
Adamts8
Tle1
Msc
Dmrta1
Myrip
Pdgfb
Ppm1l
Lrch4
Dffb
Cep104
Pias4
Tpmt
Kdm1b
Cxxc5
Tfap2a
Shroom3
Abcc9
Csmd1
Zfat
Hgs
Arl16
Slc1a2
Cdk5rap3
Tacstd2
Pwwp3a
Polr3h
Jakmip3
Gsx1
Pip4p1
Rab40c
Fzd5
Mrpl38
Cited1
Il1rapl2
Rmnd5a
Slc35e2
Frat2
Fzr1
Dipk2a
Ryr3
Grm5
Cyp2u1
Mboat2
Pdxp
Qdpr
Ryr2
Fmnl1
Kcnc1
Bcl6
Tom1l2
Drc3
Acvr2b
Fmnl3
Ntn1
Slc35f2
Kcnc4
Adap1
Cenpu
Rab11b
Stk32c
Gpc1
Ccne1
Ksr2
Slc47a2
Tmem260
Rab5b
Insig1
Sqle
Tcf15
Camk2n1
Rusc2
Cyld
Sfxn2
Arl3
Rtn4r
Twist2
Ppp1r16b
Fgfr2
Ubr5
Arf2
G3bp2
Uso1
Natd1
Tmtc1
Cnpy1
B4galnt3
Atp2b3
Col18a1
Nell2
Camta1
Glrx5
Katnb1
Gins2
Dock9
Isl1
Dusp1
Ctnnbip1
Crhr1
Akt2
Usp20
BC005624
Tmem131l
Foxk2
Flt4
Colgalt1
Hnrnpl
Reep6
Pcsk4
Esyt3
Grin3a
Eps15
Ranbp3
Igsf21
Synpr
Cdh7
Dcun1d4
Slc11a2
Ankrd13a
Arntl
Rbx1
Acap2
Nup93
Vegfa
Zc3h18
Spag7
Cnpy3
Capzb
Spsb1
Camsap1
Hs3st3b1
En2
Dact3
Sulf2
Clic4
Nupr1l
Rras2
Nfatc1
Ngfr
Six3
Chst12
Ptges2
Prodh
Raver2
Nalcn
Tmem218
Zdhhc12
Pgbd5
Ube2d1
Chd5
Atg101
Limch1
Ltbp1
Actn1
Spns2
Sstr4
3110082I17Rik
Mprip
Prpf40b
Stxbp6
Chaf1b
Htr1d
Stag1
Tedc1
Ap3d1
Dop1b
Gm5784
Marchf11
Rtn1
Plpp4
Oaz1
Bsdc1
Apcdd1
Emilin3
Adgre5
Ngdn
Ciart
Hnrnpul1
Cdca7
Dlx1
Six1
Igf2
Nkain1
Sox1
Thop1
Gnaz
Atp1b2
Grk3
Adam22
Notum
Mgat5b
Dll3
Abcb9
Rpp25
Sh3gl3
Chmp5
Bag1
Cep85
Avpi1
Zfp804a
Tle4
Gdpgp1
Cib1
Fzd8
Rasl11a
Pou4f2
Gdf1
Cers1
Ptcd2
Mrps27
Noct
Wdr25
Wars
Gatd1
1810013L24Rik
Serf2
Sgtb
Nln
Wipf3
Rps6ka2
Eomes
Mesp1
Pax2
Rab8a
Chsy1
Ascl1
Bean1
Itgb3
Grem1
Sel1l
Ddx50
Xpo1
Ccdc9
Arhgef7
Txndc16
Gpr137c
Ero1a
Gsr
Cadps2
Amer2
Ddost
Tdrkh
Col23a1
Apba2
Aldh5a1
Disc1
Shisa6
Usp22
Trim62
Gjd2
Hjurp
A730008H23Rik
Esco1
Ttbk2
Ets2
Dennd2a
Car10
Zfp607b
Oard1
Nfya
Osbpl2
Kcna6
Adamts20
Smoc1
Rfxank
Gm45929
Borcs8
Marf1
Irf1
Il7
Tenm4
Cd83
Lpar3
Mnx1
Slc16a9
Prkdc
Mcm4
Atrnl1
Txnip
Zbtb9
Mixl1
Trhde
Hspa5
Xab2