ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028800 | Embryonic gonad
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◣ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Wdr77
Atp5pb
Ptcd3
Polr1a
Rpl19
Calm3
Cdk12
Ift27
Pknox1
Qrich1
Pik3r3
Phrf1
Arid4a
Arntl
Sharpin
Maf1
Pfdn4
Septin11
Tcp11l2
Tada3
Arpc4
Fus
Lrpprc
Cmc2
Cenpn
Cdiptos
Cdipt
Get3
Prkdc
Mcm4
Gipc1
Uchl3
Mat2a
Top2a
Dgat2
Taf15
Flad1
Denr
BC005537
Tigd5
Eef1d
Inip
Cenpe
Uqcrh
Lrrc41
Hyal2
Mblac1
Mlst8
Dolpp1
Dut
Psmd5
Eif3b
Ptcd2
Mrps27
Nr6a1
Dnm2
Cnot6
Por
Camta1
Rita1
Ddx54
Hexim1
Mgrn1
Dohh
Tepsin
Ndufaf8
Ap3m2
Mfsd13b
Cdr2
Prkci
Slc39a3
Oga
Wdr27
1600012H06Rik
Gnb2
Tctn2
Zswim4
Aldh4a1
Arrdc4
Tmem218
Mrps11
Mrpl46
Jun
Ppm1l
Lsg1
Atg101
Slbp
Tbc1d17
Akt1s1
Nphp4
Kcnab2
Cnot1
Sp2
Mia2
Dpp9
Dnmt1
Sash1
Styxl1
Mdh2
Tom1
Uros
Bccip
Rhbdd3
Ewsr1
Ube2d3
Fam227a
Cby1
Smim10l1
Hnrnpc
Cln8
Abhd2
Eif2ak3
Ube2c
Tmem260
Atp5b
Mapk14
Eed
Asah1
Ptdss1
Mterf3
Wasf1
Cdc40
Ankrd54
Atrnl1
Rmnd5a
Noct
Zfp27
Rbm39
Uhrf2
Gm12258
Gpr108
Traf2
Prkaca
Arap1
Ttll7
Psip1
Ankhd1
Pkia
Oxr1
Elavl2
Eif4a3
Rpl22
Ttc41
Hsp90b1
Cdc25c
Fam76a
Ndufb1
Cpsf2
Ptov1
Tst
Mpst
Rnf5
Nucb2
Selenop
Samd4b
Gmfg
Cep135
Ncoa2
Map7d1
Naa35
Slc25a4
Hydin
Smc3
Frat1
Nudt2
Kif24
Rtn3
Nectin3
Ankfy1
Mvk
Mmab
Pafah1b3
Fbxo33
Rps6ka5
C1d
Selenow
Aars
Bcl6
Pin1
Nsun3
Siah1b
Lrch4
Fanci
Rps7
Tspyl1
Glrx5
Pias2
Tmem198b
Dnajc14
Hdac2
Kmt5c
Ccdc85c
Raly
Tmbim6
Tcerg1
Per2
Kctd2
Atp5h
Paip2b
Usp1
Crebzf
Rpl12
Lrsam1
Robo1
Pxmp4
Srek1ip1
Cwc27
Hspa4
Polg
Tnrc6b
Pan2
Nol6
Med30
Cd164
Srpk2
Zbtb40
Rab28
Rab5b
Timm17b
Pqbp1
Fchsd2
Fubp1
Dnajb4
Cep41
Atf7
Zswim1
Sel1l
Mtmr14
Gm5165
Atp8a1
Khsrp
Eif5
Madd
Nol8
Cenpp
Cic
Mob1a
Ift22
Actr1a
Rnpc3
Oscp1
Fam204a
Timeless
Stip1
Tmem209
Ssmem1
Utp18
Mbtd1
Cfap77
Pip4k2b
2610008E11Rik
Kat6b
Fdft1
Kansl2
Rpp38
Zfp687
Iqch
Aagab
Lamp1
Add1
Sipa1l1
Canx
Sarnp
Ormdl2
Sec23ip
Isoc2b
Hdac1
Spsb3
Nubp2
Gripap1
Nudt1
Abhd16a
Ska2
Prr11
Mis12
Derl2
Kdm4b
Trp53
Wrap53
Zfp691
Pycr2
Myl12a
Srgap2
Fam72a
Mphosph8
Micos10
Cct5
Atpsckmt
Psmb2
Ephb2
Miga2
Wdr6
Paxip1
Prpf40a
Arl6ip6
Rraga
Uba1
Immp1l
Elp4
Rlim
Uqcrq
Supt5
Scamp5
Hint2
Anp32a
Zfp574
Srarp
Stxbp4
Cox11
Hnrnpr
Edrf1
Maco1
Pip5k1c
Galnt10
Uchl1
Rbm15
Wbp1
Acat2
Ankrd13a
Zfyve21
Xrcc3
Bub1
Pold4
Prdm10
Ttbk2
Frem3
Smarcal1
Dcaf11
Ss18
Nudcd2
Hmmr
Flcn
Recql
Golt1b
Rpusd3
Rbm27
Relch
Pign
Cemip
Rps19
Tbccd1
Dnajb11
Palb2
Dctn5
Zbtb5
Ensa
Xrcc1
Pinlyp
Naa38
Cyb5d1
Zfand3
Zfp143
Hbp1
Katnb1
Kdm4a
G3bp1
Tubb4b
Dcaf7
Sp1
Narf
Rcl1
Zfp869
Rpn2
Mroh8
Glce
Ap2a1
Ppp6r3
Rfx1
Psmb3
Orai3
Ppm1b
Kctd9
Cdca2
Dcps
Gatad2a
Dbp
Ubald2
Osbp
Evi5l
Rab11b
Sult6b2
Kmt2a
T2
Fam53c
Asmt
Gnai2
Akirin1
Jag2
Cenpu
Sspn
Atg12
Ap3s1
Myh14
Ndst2
Eapp
Polr2a
Sod2
Ube2b
Dlst
Wasl
Oasl1
Mtf2
Rps29
Cul2
Diaph1
Cltc
Bzw1
Fam20b
Fgd4
Rps27l
Sec14l1
Xpc
Lsm3
Zfp219
Pa2g4
Hexim2
Slc35e2
Rbm25
Proser1
Nhlrc3
Srsf7
Mfsd8
Tspan4
Hjurp
A730008H23Rik
Lrrc56
Hras
Akt2
Cdca7l
Cd3eap
Ap2m1
Polr2l
Tmem41b
Mtss2
Srxn1
Bzw2
Ankmy2
Rnasek
Fbxl14
Cdt1
Atp6v0c
Brd2
Rab33b
Tjp2
Wwox
Dot1l
Abhd18
Frat2
Phlda3
H3c14
Tbck
Aimp1
Susd6
Pole3
Gm3448
Gm3417
4933430I17Rik
Trappc9
Ctnnb1
Dnajc16
Nme1
H3c15
Ubr4
Get4
Slc35b1
Ccser2
Cct8
Arl2
Gtf2a1
Uvssa
Nmral1
Tcte3
Atg16l2
Slc30a5
Chmp7
Zxdc
Cbr3
Ints10
Mrpl21
Ighmbp2
Frmd6
Rbbp6
Htra2
Them6
Stat3
Bbs2
Nt5c3
Limch1
9030025P20Rik
Rpl27
Ilf2
Ints4
Fkbp3
Ermard
Nuf2
Mapkapk5
Isy1
Cspp1
Cops5
Taf9
Rad17
Ak6
Spty2d1
Chordc1
Mtch2
Tob1
Ddx41
Birc2
Magi1
Cfap20
Tpt1
Mrpl30
Mitd1
Wdfy2
1700016H13Rik
Get1
Tecpr1
Rusc2
Nfatc2ip
Gm3435
Zscan25
Plekha1
Gramd1b
Fam149b
Ecd
Cnot3
Ttc14
Zfp607b
Txnip
Faf1
Esyt2
Oprd1
Kpnb1
Med6
Zfp24
Tomm40
Snrpc
Hmgcs1
Nabp1
Armc1
Psmd3
Opa1
Rps12
H4c3
Tsga10
Actr3
Dffb
Cep104
Usp20
BC005624
Hes6
Calm1
Gtf2f1
Tcf3
H3f3b
Aard
Cactin
Smim4
Rbm5
Sigmar1
Dgat1
Rer1
Morn1
Tfg
Ccnt2
Itgb4
Kansl3
AW549877
Rps3a1
Nfat5
Zcchc14
Crtc1
Egr2
Eps15
Nup133
Srm
Aig1
Fitm2
Nacc2
Map3k7
Zfp654
Cggbp1
Ngdn
Vta1
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Wdr92
Pno1
Ist1
Evpl
Grb2
Inka1
Rel
Kpna3
Pop7
Utp3
Lig4
Sde2
Gale
Arhgef4
Stk32c
Rgl2
Ltbp1
Abcf2
3110082I17Rik
Dap3
Cipc
Supv3l1
Rpl3
Gorasp2
Mef2a
Bod1l
Eif4e
Ift140
Cramp1l
Poc5
Fam3c
Ttll5
Kifap3
Erg28
Arhgap11a
Zc3h18
Arf2
Hnrnpa2b1
Cbx3
Ppp4r3b
Rnf7
Mettl25
Hr
Ccdc59
Colgalt1
Mmp15
Spc25
Fdxr
Ssrp1
Sacm1l
Rbbp5
Mideas
Npc2
Isca2
Cep63
Anapc13
Slc33a1
Mdm2
Gpatch8
Rap2a
Adnp
Haspin
Tex14
Usp12
P4hb
Cdca8
Abhd13
9930104L06Rik
Fam227b
Dtwd1
Cfap298
Rab6a
Dcp1a
Nlk
Zfpl1
Cdca5
Ep400
Yars
S100pbp
Pias4
Pex3
Adat2
Arl15
Med23
Fra10ac1
Banp
Man1b1
Rwdd1
Sfi1
Wasf2
Nup54
Birc5
Rbbp9
Aph1b
Ap1g1
Timm13
Ube2j2
Cebpa
Med17
Cyth1
Mknk2
Txnl4b
Dhx38
2900026A02Rik
Atp5g1
Kdsr
Ss18l1
Psma7
Kifc5b
Ttll10
Cpsf1
Vps26c
Rab21
Hspa5
Ireb2
Nomo1
Cox18
Dhx33
Jpt2
Kbtbd3
Aasdhppt
Spring1
Rnft2
Slc25a25
Clptm1
Mafa
Rab40c
Srd5a1
Nsun2
Tacc1
Chchd2
Ssbp2
Snrnp200
1810024B03Rik
Ube2f
Sh3gl1
Rad23b
Gm51425
Ndufs7
Ric8b
Eif3f
Smim14
Tubg1
Retreg3
Saysd1
Cwc22
Vapa
Tut7
Lsr
Fam83b
Fam187b
Tex2
Pradc1
Myl12b
Cct7
Tmed2
Yipf2
Timm29
Trib1
Calr
Commd1
Usp53
Smc6
Gen1
Bcl9l
Stt3a
Ubald1
Mindy2
Fem1b
Wdr36
Lancl2
Copz1
Gm3739
Khdrbs1
Mrpl1
Cdk11b
Ddx20
Otud6b
Mtres1
Ppp2r5a
Mrpl44
Hnrnpl
Stag1
Setd3
Ccnk
Atf2
H2ac19
H2ac18
Cacybp
Supt4a
Ggct
Nvl
Plag1
Chmp5
Bag1
Mfsd4b4
Gas1
Ppwd1
Cenpk
Atg2a
Lsm14b
Eea1
Phf12
Tram1
Parp6
Nudt9
2310057M21Rik
Epg5
Ccdc126
Zfat
Ppp3cb
Herc2
Aff1
Polr3g
Mblac2
Arid1a
P4ha1
Rab5if
Clptm1l
Scamp1
Myh10
Poldip3
Krr1
Mtmr2
Ddost
Megf8
Smg8
Dedd2
Cnot11
Brpf1
Meis1
Galk2
Cops2
Stx16
Pnn
Uspl1
Slc3a2
Cnnm3
Septin7
Xpnpep3
St13
Mrps31
Csnk1g2
Ahctf1
Sphk2
Rpl18
Dnajb1
Agpat5
Slc25a32
Dcaf13
Tmem19
Spa17
Siae
Yif1b
Pxk
Ifnar1
Cyth2
Dab1
Slc39a13
Serpinb5
Pdik1l
Ampd3
Ss18l2
Dhx8
Btbd11
Thap12
Gmfb
Cops8
Dynll1
Tars
Srsf1
Wdr43
Prcc
Dnajb9
Zfp513
Fer
Eif1
Socs1
Oaz1
Nup50
Nufip1
Gpalpp1
Sun1
Nsfl1c
Taf4b
Ppp1cb
Mtmr6
Xab2
Pet100
Fzd2
Setx
Jund
Pabpc4
Rad51ap1
D6Wsu163e
Pdap1
Bud31
Ctnna1
Exosc5
Bckdha
Sgms1
Ddx18
Mmaa
Rptor
Git2
Cilk1
Polr3f
Dzank1
Tedc1
Tsc22d1
Smarcd2
Slc25a42
Srp19
Zfp668
Itgb1bp1
Flywch1
Cpsf3
Leng8
Polr2e
Alpk1
Ccni
Atg16l1
2010109A12Rik
Gtf2b
Galnt9
Errfi1
Dgcr8
Sgms2
Bsdc1
Sugp2
Armc6
Virma
Rfxank
Gm45929
Borcs8
Zfp317
Traf7
Ect2
Snx12
Ahcyl1
Spdl1
Ddx56
Rbx1
Naa40
Cpped1
Cdc34
Nudt15
Nt5c2
Arhgap19
Agap1
Ufl1
Npm1
Ncbp2
0610012G03Rik
Mrpl12
Gtf3c2
Fut10
Lrrc27
Dad1
Cox7a2l
Ccng2
Abhd4
Glo1
Rpl36al
Mgat2
Mcm7
Arl6ip1
Ap4m1
Tmtc3
Cep290
Abcf3
Ppm1n
Eif2s1
Atp6v1d
Tcp1
Mtg1
Mrpl18
Uchl5
Sh3kbp1
Ro60
Cops4
Opa3
Ulk2
Pigm
Notch2
Zfp748
Ube2i
Rnf14
Hinfp
Letm1
Eif4a1
Cherp
Atg5
Klf10
N4bp2l2
Ube2d2a
Ttc32
Map2k7
Anapc10
Abce1
Trmt2a
Ranbp1
Birc6
Ubb
Fbxw7
Mxd4
Plekha7
Hadhb
Hadha
Atxn7l2
Etfrf1