ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

T2
Asmt
Mia2
Phrf1
Oga
Dnmt1
Ptcd2
Mrps27
Prkdc
Mcm4
Rita1
Ddx54
Cd164
Pip5k1c
Ift27
Sod2
Oasl1
Uchl1
Brd2
Ankrd13a
Asah1
Rpl22
Fam53c
Taf15
Tacc1
Wasl
Fam227a
Cby1
Akirin1
Bzw2
Ankmy2
Ccdc85c
Ptov1
Cnot6
Dlst
Dbp
Ptcd3
Polr1a
Sash1
Ap2m1
Cmc2
Cenpn
Tom1
Nphp4
Kcnab2
Paxip1
Gipc1
Dut
Rpn2
Mroh8
Calm3
Eif3b
Gpr108
Cdiptos
Cdipt
Rusc2
Tigd5
Eef1d
Pknox1
Brat1
Septin11
Slc39a3
Vangl2
Cspp1
Cops5
Cln8
Fchsd2
Prdm10
Them6
Mrps11
Mrpl46
Aldh4a1
Spata17
Gpatch2
Atp6v0c
Atg12
Ap3s1
Dot1l
Por
Pfdn4
Cenpe
Rfx1
Madd
Lyrm1
Dcun1d3
Eed
Raly
Pafah1b3
Flcn
Akt2
Zfp24
Diaph1
Sp2
Slc35e2
Sspn
Arntl
Galnt10
Uros
Bccip
Rab5b
Dpp9
Celsr3
Tepsin
Ndufaf8
Rab28
Iqch
Aagab
Zfp27
Myh14
Prkci
Ptdss1
Mterf3
Sharpin
Maf1
Timeless
F830045P16Rik
Rpl19
Arid4a
Rbbp6
Rnasek
Tcp11
Ak1
Atrnl1
Fbxo33
Hdac2
Ppt2
Dedd2
Chmp3
Paip2b
Pcdh9
Dohh
Mblac1
Gnb2
Sri
Fanci
Rbbp9
G3bp1
Arrdc4
Atg101
Dolpp1
Oxr1
Hyal2
Dgat2
Smarcal1
Uchl3
Ndufb1
Cpsf2
Arl2
Cd3eap
Cfap77
Inava
Rps29
Srxn1
Get3
Mlst8
Sp1
Kctd2
Atp5h
Mat2a
Slbp
Nmral1
Stx16
Zfp748
Map7d1
Prkag2
Dnm2
Frat1
Cnot1
Ska2
Prr11
Flad1
Uqcrq
Uqcrh
Lrrc41
Tmem260
Traf2
Hdac1
Col9a1
Pkia
Vmn2r4
2310039H08Rik
Abhd16a
Frat2
Atp5b
Hap1
Fgd4
Tada3
Arpc4
Tbc1d17
Akt1s1
Smg8
Tst
Mpst
Ndst2
Atp8a1
Tpbg
Phldb1
Srek1ip1
Cwc27
Abhd2
Atg16l2
Polg
Wasf1
Cdc40
Sox5
Apela
Bzw1
Sigmar1
Ppm1l
Hexim1
Fbh1
Ankrd16
Tsc22d1
Nol8
Cenpp
Utp18
Mbtd1
Fzd2
Ablim1
Myl12a
Limch1
Lrpprc
Mrpl21
Ighmbp2
Mtmr14
Cnot3
Pik3r3
Tcp11l2
Uba1
Syn1
Osbp
Zdhhc5
Selenow
BC005537
Ankrd54
Nfatc2ip
Psip1
Ppp6r3
Frmd6
Cic
Dcps
Lsg1
Stt3a
Polr2a
Eif2ak3
Wasf2
Dffb
Cep104
Ttll7
Elmo2
Cct5
Atpsckmt
Zfp691
Ube2b
Pip4k2b
Plekhf2
Rtkn
Top2a
Proser1
Nhlrc3
Selenop
Mgrn1
Ogfod1
Nudt21
Tle3
Cdt1
Rara
Fus
Zfp574
Chchd2
Ndufs7
Fkbp8
Tnrc6b
Noct
Adpgk
Rptor
Ncbp2
0610012G03Rik
Rtkn2
Robo1
Rmnd5a
Cobll1
Cul2
Nudt2
Kif24
Ngdn
Myl12b
Tmem198b
Dnajc14
Mocs3
Dpm1
Ube2a
Cyp2u1
Smc3
Rab4b
Opa3
Ephb2
Gpsm2
Bscl2
Slc4a2
Gng3
Trp53
Wrap53
Tnrc18
Nf2
Arvcf
Chrm1
Zfp219
Glrx5
Rhobtb3
Col9a3
Ss18l1
Psma7
Fos
Phldb2
Rab34
Atf7
Rhbdd3
Ewsr1
Rcc2
Zfp654
Cggbp1
Pabpn1
Ppdpf
Rnf5
Camta1
Swsap1
Fdft1
Tmem242
Npas4
Hnrnpc
Magi1
Lars
Tom1l2
Drc3
Lrch4
Dcaf7
Mon1b
Fuz
Syvn1
Prdx2
Rab11b
Zfyve21
Xrcc3
Mapre3
Ss18
Prickle1
Zfp580
Stip1
Cdc25c
C1d
Crebrf
Akap8l
Cdk2ap2
Zmat2
Cep41
Rbm5
Kif1b
Dap3
Ung
Kpnb1
Nlk
Got1
Ivd
Pmvk
Sorbs2
Plpp2
Map3k3
Ankhd1
Bcl9
Ppfia3
Slc25a25
Bcl6
Mrpl44
Tedc1
Evi5l
Wdr70
Rcl1
Zfp180
Pcx
Trub2
Atp5e
Igsf9b
Hmgcs1
Rgmb
Gfra1
Nectin3
Psma8
Rhoj
Prpf40a
Arl6ip6
S1pr2
Ypel4
Scamp1
Ube2c
Gatad2a
Prkaca
Cdca8
9930104L06Rik
Atp5g1
Sel1l
Znhit3
Gripap1
Pdk2
B4galt7
Pcid2
Cul4a
Maneal
Frmd5
Vdr
Zfp687
Sox6
Agpat4
Kcnk2
Mis12
Derl2
Wfikkn2
Pnn
Pygo2
Spag7
Tomm40
Khsrp
Tcf12
Tspan4
Polr2l
Arhgef40
Hnrnpl
Enah
Abhd18
Mvk
Mmab
Nol6
Copz1
Ggct
Tbcb
Polr2i
Rplp0
Hint2
Tpcn1
Iqcd
Tmem198
Chpf
Pwwp2a
Ndufs4
Sin3a
Dhx30
Selenoh
Cmtm5
Fbxl14
Katnb1
Meis1
Tmx2
Med19
Tgfb3
Creb3l2
Per2
Ugdh
Mapk6
Cdo1
Ift140
Cramp1l
Nynrin
Zfp869
Mtss2
Get4
Ccser2
Tmem218
Mrpl30
Mitd1
Pin1
Mdm2
Kansl2
Gm51425
Mrpl1
Zfp513
Nap1l4
Fbxl15
Klhl20
Leprot
Zfp101
Calcoco1
Otub2
Tmem160
Vps50
Chadl
Aanat
Plxna3
Slc46a3
Pgd
Hmgcll1
Magel2
Kmt5c
Ttc41
Hsp90b1
Erg
Rab40c
Myh10
Anp32e
Arid1a
Dynll1
Cdca7l
Opa1
Nup133
3110082I17Rik
Med23
Cyth2
Tctn2
Zswim3
Acot8
Vps51
Timm17b
Pqbp1
Aars
Ankzf1
Enpp2
Ssrp1
Eif5
Eapp
Tex14
Rgs3
Fam110a
Bbx
Tjp2
Sptlc2
Mfsd8
Phf12
Nup93
Zswim4
Yipf2
Timm29
Bcas3
Gins2
Drg2
Phb
D16Ertd472e
Tomm22
Tspan33
Pan2
Ensa
Gnas
Nr6a1
Kat6b
Dcaf11
Angptl1
Rtn3
Qrich1
Gm5165
Fkbp3
Tcerg1
Palb2
Dctn5
Tma16
Rbm27
Rnf26
Srp68
Tdrkh
Dnttip2
Mrps10
Bckdk
Inip
Ap2a1
Srpk2
Tomm70a
Lancl2
Pradc1
Cct7
Gid4
Uvssa
Usf3
Rel
Atxn7l2
Mrpl39
Yif1a
Acsf3
Saxo1
Mlec
Pnpla6
Fxyd3
Dgcr8
Zfp335
Tatdn3
Nsl1
Slc35a3
Kcnj16
Elavl2
Cdk5rap3
Cntrl
Neurl2
Ctsa
Zfp668
Ibtk
Kmt2a
Denr
Gnai2
Jag2
Cenpu
Wdr77
Atp5pb
Mtf2
Cltc
Fam20b
Rps27l
Sec14l1
Xpc
Lsm3
Pa2g4
Hexim2
Cdk12
Rbm25
Srsf7
Hjurp
A730008H23Rik
Lrrc56
Hras
Spsb3
Nubp2
Crebzf
Tmem41b
Zfp143
Rab33b
Wwox
Phlda3
H3c14
Tbck
Aimp1
Susd6
Pole3
Gm3448
Gm3417
4933430I17Rik
Trappc9
Ctnnb1
Dnajc16
Nme1
H3c15
Ubr4
Slc35b1
Cct8
Gtf2a1
Tcte3
Slc30a5
Chmp7
Zxdc
Cbr3
Ints10
Htra2
Stat3
Bbs2
Nt5c3
Rbm39
9030025P20Rik
Rpl27
Ilf2
Ints4
Styxl1
Mdh2
Ermard
Nuf2
Mapkapk5
Isy1
Taf9
Rad17
Ak6
Spty2d1
Chordc1
Mtch2
Tob1
Ddx41
Birc2
Cfap20
Tpt1
Wdfy2
1700016H13Rik
Get1
Tecpr1
Gm3435
Zscan25
Plekha1
Tubb4b
Gramd1b
Fam149b
Ecd
Ttc14
Zfp607b
Txnip
Faf1
Esyt2
Oprd1
Med6
Snrpc
Nabp1
Armc1
Psmd3
Rps12
H4c3
Tsga10
Actr3
Usp20
BC005624
Hes6
Calm1
Gtf2f1
Zfand3
Tcf3
H3f3b
Aard
Cactin
Smim4
Dgat1
Rer1
Morn1
Tfg
Ccnt2
Itgb4
Kansl3
AW549877
Rps3a1
Nfat5
Zcchc14
Samd4b
Gmfg
Crtc1
Egr2
Eps15
Srm
Aig1
Fitm2
Nacc2
Map3k7
Hspa4
Mapk14
Lamp1
Vta1
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Wdr92
Pno1
Ist1
Evpl
Grb2
Inka1
Kpna3
Pop7
Eif4a3
Utp3
Lig4
Sde2
Gale
Arhgef4
Stk32c
Rgl2
Ltbp1
Abcf2
Cipc
Supv3l1
Ube2d3
Rpl3
Gorasp2
Mef2a
Glce
Bod1l
Eif4e
Poc5
Fam3c
Ttll5
Kifap3
Erg28
Arhgap11a
Zbtb40
Rps7
Zc3h18
Arf2
Mob1a
Hnrnpa2b1
Cbx3
Ppp4r3b
Rnf7
Hbp1
Mettl25
Hr
Ccdc59
Colgalt1
Mmp15
Spc25
Fdxr
Sacm1l
Rbbp5
Mideas
Npc2
Isca2
Cep63
Anapc13
Slc33a1
Gpatch8
Rap2a
Adnp
Haspin
Usp12
P4hb
Abhd13
Fam227b
Dtwd1
Cfap298
Rab6a
Dcp1a
Zfpl1
Cdca5
Ep400
Yars
S100pbp
Pias4
Pex3
Adat2
Arl15
Fra10ac1
Banp
Rps6ka5
Man1b1
Rwdd1
Sfi1
Nup54
Birc5
Aph1b
Ap1g1
Timm13
Usp1
Ube2j2
Cebpa
Med17
Cyth1
Mknk2
Txnl4b
Dhx38
2900026A02Rik
Kdsr
Kifc5b
Ttll10
Cpsf1
Vps26c
Psmd5
Srgap2
Fam72a
Rab21
Hspa5
Ireb2
Nomo1
Cox18
Ubald2
Dhx33
Jpt2
Kbtbd3
Aasdhppt
Naa35
Wdr27
1600012H06Rik
Spring1
Rnft2
Clptm1
Mafa
Srd5a1
Nsun2
Ssbp2
Snrnp200
1810024B03Rik
Ube2f
Jun
Sh3gl1
Rad23b
Ric8b
Eif3f
Smim14
Tubg1
Retreg3
Saysd1
Cwc22
Vapa
Tut7
Lsr
Fam83b
Fam187b
Tex2
Tmed2
Rps19
Trib1
Calr
Commd1
Usp53
Smc6
Gen1
Bcl9l
Ubald1
Mindy2
Fem1b
Psmb2
Wdr36
Gm3739
Khdrbs1
Cdk11b
Ddx20
Otud6b
Mtres1
Ppp2r5a
Stag1
Setd3
Ccnk
Atf2
Xrcc1
Pinlyp
H2ac19
H2ac18
Cacybp
Supt4a
Nvl
Plag1
Fubp1
Dnajb4
Chmp5
Bag1
Mfsd4b4
Gas1
Ppwd1
Cenpk
Atg2a
Lsm14b
Eea1
Tram1
Parp6
Nudt9
2310057M21Rik
Epg5
Ccdc126
Zfat
Ppp3cb
Herc2
Aff1
Polr3g
Mblac2
P4ha1
Rab5if
Clptm1l
Poldip3
Krr1
Mtmr2
Ddost
Megf8
Cnot11
Brpf1
Galk2
Cops2
Uspl1
Slc3a2
Cnnm3
Septin7
Fam76a
Xpnpep3
St13
Mrps31
Csnk1g2
Ahctf1
Sphk2
Rpl18
Dnajb1
Agpat5
Slc25a32
Dcaf13
Zbtb5
Tmem19
Spa17
Siae
Yif1b
Pxk
Ifnar1
Dab1
Slc39a13
Serpinb5
Pdik1l
Ampd3
Ss18l2
Dhx8
Btbd11
Thap12
Gmfb
Cops8
Tars
Srsf1
Wdr43
Prcc
Dnajb9
Fer
Eif1
Socs1
Oaz1
Nup50
Nufip1
Gpalpp1
Sun1
Nsfl1c