ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035119 | Embryonic nose
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◣ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Gnai2
Phrf1
Pip5k1c
Fam53c
Atg12
Ap3s1
Sp2
Arrdc4
Cmc2
Cenpn
Oga
Ndufb1
Cpsf2
Septin11
Lrpprc
Taf15
Rita1
Ddx54
Iqch
Aagab
Tigd5
Eef1d
Cnot6
Rtn3
Arntl
Cln8
Smim4
Psip1
Hdac2
Flcn
Flad1
T2
Rfx1
Arid4a
Prkdc
Mcm4
Myh14
Tst
Mpst
Asah1
Tmem260
Smc3
Eed
Nol8
Cenpp
Fus
Galnt10
Sod2
Ankrd13a
Git2
Sec14l1
Osbp
Calm3
Ptcd2
Mrps27
Uchl3
Abhd2
Slbp
Hyal2
Atrnl1
Sash1
Ska2
Prr11
Ptov1
Hnrnpc
Prkci
Mlst8
Dut
Tada3
Arpc4
Gipc1
Aldh4a1
Rpl22
Dohh
Ankrd54
Cdiptos
Cdipt
Ppm1l
Pkia
Rab5b
Nphp4
Kcnab2
Cenpu
Eif2ak3
Ptdss1
Mterf3
Sharpin
Maf1
Pik3r3
Prdm10
Ttll7
Ptcd3
Polr1a
Rpn2
Mroh8
Ephb2
Ndst2
Dolpp1
Por
Rbm25
Akirin1
Rmnd5a
Zxdc
Ift27
Ube2c
Tepsin
Ndufaf8
Srek1ip1
Cwc27
Atg101
Uros
Bccip
Selenow
Spty2d1
Pknox1
Fbxo33
G3bp1
Sgms1
Bzw1
Uqcrh
Lrrc41
Noct
Dnmt1
Diaph1
Rnf5
Madd
Robo1
Zfp219
Tmem218
Fkbp3
Dlst
Paxip1
Mblac1
Cd3eap
Cnot1
Rnasek
Slc36a4
Rel
Khsrp
Map7d1
Atp5b
Them6
Nlk
Cspp1
Cops5
Cul2
Dpp9
Adgrv1
Nmral1
Tcerg1
Ttll10
Ankhd1
Sp1
Gpr108
Cenpe
Mrpl21
Ighmbp2
Wasf1
Cdc40
Med23
Fam227a
Cby1
Brd2
Tcp11l2
Top2a
Gm5165
Mia2
Nt5c3
Mtss2
Ccser2
Zfp869
Rpl27
Rab11b
Rab21
Oxr1
Cltc
Tom1
Nfatc2ip
Mis12
Derl2
Abhd16a
Slc39a3
Arhgap19
Ccdc85c
Eif3b
Fam204a
Ap2m1
Ss18
Slc35e2
Sh3kbp1
Cd164
Cdk12
Nudt2
Kif24
Bcl6
Mat2a
Rbbp6
Wwox
Armc1
Kctd2
Atp5h
Frat1
Raly
Jun
Myl12a
Palb2
Dctn5
Gnb2
Per2
Frat2
Dnm2
Klhl26
Bzw2
Ankmy2
Dgat2
Cdca7l
Glo1
Ist1
Zfp24
Paip2b
Fsbp
Ube2b
Cyth1
Smim14
Srgap2
Fam72a
Cic
Qrich1
Prkaca
Cdca8
9930104L06Rik
Nufip1
Gpalpp1
Tbc1d17
Akt1s1
Pafah1b3
Tcp11
Fgd4
Sigmar1
Syn1
Ttc41
Hsp90b1
Lrch4
Rhbdd3
Ewsr1
3110082I17Rik
Uba1
Stt3a
Utp18
Mbtd1
Akt2
Wasl
Jpt2
Mfsd8
Hars2
Hars
Pnn
Immp1l
Elp4
Gatad2a
Fanci
Kmt5c
Tmem9b
BC005537
Zfp143
Rnf26
Lsg1
Nup54
Tbck
Aimp1
Glrx5
Kdm4b
Stip1
Katnb1
Evi5l
Hmgcs1
Wasf2
Mrpl44
Gas7
Pin1
Psmb3
Fchsd2
Pfdn4
Mvk
Mmab
Pou2af1
Cnot3
Tnrc6b
Pan2
Gbf1
Nuf2
Gm51425
Ddx56
Mtmr14
Cct8
Abhd18
Mrpl30
Mitd1
Zcchc14
Pdk2
Hexim2
Mtch2
Atg16l2
Myh10
Traf2
Polg
Luc7l2
Hbp1
Wdr77
Atp5pb
Wdr36
Lars
Srxn1
Tctn2
Slc43a3
Mrps31
Zfp687
Cfap298
Dcps
Dmxl1
Ppt2
Zfp386
Hnrnpa2b1
Cbx3
Cdc25c
Actr3
Zfp654
Cggbp1
Rab40c
Prpf40a
Arl6ip6
Fbh1
Ankrd16
Zfp961
Gm6712
Mrpl1
Kdm4a
Slc25a20
Arl2
Lztfl1
Sphk2
Rpl18
Cyth2
Prnp
Prn
Frmd6
Cul1
Ube2j2
Zswim4
Wdr25
Wars
Tmem94
Rbm39
Copz1
Canx
Ngdn
Tedc1
Spata17
Gpatch2
Tle3
Wdr27
1600012H06Rik
Spring1
Rnft2
Aig1
Rpl19
Lrriq3
Fpgt
Znhit1
Plod3
Timm17b
Pqbp1
Zfyve21
Xrcc3
Ttc14
Ap2a1
Kpnb1
Tut1
Tube1
Fam229b
Dnajc16
Hdac1
Camta1
Cstf2t
Rbm5
Proser1
Nhlrc3
Abhd1
Uvssa
Snrnp200
1810024B03Rik
Pex3
Adat2
Mrps23
Srp19
Tdrkh
Calm1
Anapc5
Ss18l1
Psma7
Knl1
Nucb2
Ift140
Cramp1l
Fut10
Opa1
Utp3
Med30
Dcp1a
Scamp1
Mettl25
Ccdc59
Isy1
Rusc2
Rab28
Pcyox1l
Trib1
Sel1l
Pip4p1
Kansl2
Flywch1
Nap1l4
Zbtb3
Dap3
Tfcp2
Chordc1
Kat6b
Opa3
Pip4k2b
Mgrn1
Lnpep
Rab33b
Ilf2
Ddost
Styxl1
Mdh2
Slc33a1
Zfp748
C330007P06Rik
F13a1
Mphosph10
Mcee
Anp32e
Mtf2
Tom1l2
Drc3
Cnot10
Got1
Zfp101
Kctd9
Cdca2
Mocs3
Dpm1
Spdl1
Fam20b
Fdxr
Txnip
Grk5
Denr
Tspan4
Polr2l
Slc29a1
Klhdc10
Nbr1
Brca1
Zbtb40
Get3
Ap1g1
Nol6
Asmt
Haspin
Sgms2
Lancl2
Mcm3
Bms1
Tubb4b
Gtpbp3
Dhx33
Ctnnd1
Npc2
Isca2
Rps6ka5
Meis1
Rrp15
Dedd2
Gnas
Dbp
Cnot11
C1d
Ints10
Ddx41
Fosl1
Lig4
Abhd13
Eif3f
Pabpn1
Zfp574
Psmb2
Aff1
Ufsp2
1700029J07Rik
Ppp6r3
Hinfp
Syt7
Nedd4
Galk2
Cops2
Get1
Timm22
Leng8
Hnrnpr
Hsd17b12
Ndufb3
Fam126b
Ssbp1
Znrd1as
Znrd1
Zfp180
Miga2
Nudcd2
Hmmr
Fam149b
Ecd
Uchl1
Rbm27
Tob2
Ints4
Krr1
Zbtb5
Chchd2
Drg2
Hnrnph2
Gla
Mob1a
Ciart
Trim45
Atp6v0c
Esyt2
Gatad2b
AW549877
Ift22
Qtrt2
Ccdc191
Wdfy2
Trip4
Adnp
Srsf1
Cnot8
Tmem101
Stat3
Fdft1
B3gntl1
Nsfl1c
Sptlc2
Mfsd13b
Cdr2
Zfp513
Retsat
Elmod3
Exosc4
Dcaf7
Gpn3
Fam216a
Ccdc88a
Mtor
Ensa
Rpa2
Ube2f
Nvl
Traf7
Tcf3
Polr2a
Xab2
Pet100
Zfp668
Mtg1
Rpp38
Hnrnpl
Rogdi
Sugct
Mplkip
Spsb3
Nubp2
Recql
Golt1b
Tmx2
Med19
Ccdc89
Zdhhc5
Acp2
Yars
S100pbp
Tfg
Lamp1
Kifbp
Vps51
Cluap1
1700037C18Rik
Yipf2
Timm29
Atp5g1
Ap3s2
Nme1
Zfp560
Mre11a
Ankrd49
Faap24
Postn
Kansl3
Smarcal1
Ubald2
Zfp472
Rpl26
Dffb
Cep104
Rtraf
Fam76b
Cep57
Aars
Tspyl1
Klhl20
Tmem198b
Dnajc14
Smarcd2
Mia
Snrpc
Herc2
Bcas3
Kifap3
Mxd1
Htra2
Cct5
Atpsckmt
Nop14
Grk4
Polr3b
Tulp4
Tomm40
Atf7
Znhit3
Trappc9
Smg8
Sacm1l
Yju2
Zdhhc24
Actn3
Mrpl39
Cipc
Ube2s
Psph
Cct6a
Ggct
Trp53rkb
Ogfod1
Nudt21
Nasp
Zfp691
Dcun1d4
Ndufs7
P4hb
Pigm
Ppip5k2
Gin1
Ercc6l2
Fem1b
Tma16
Septin7
Cox7a2l
Alkbh3
Fos
Map3k3
Rrbp1
Orai3
Cacybp
Trp53rka
St6galnac6
Kifc5b
Mlf2
Gabpb2
Wdr92
Pno1
Usp22
Nudt13
Slc25a25
Gid8
Dido1
Ift46
Drosha
6030458C11Rik
Ptrhd1
Cenpo
Lama4
Ect2
Rheb
Zswim3
Acot8
Akap8l
Ticrr
Uvrag
Tex14
Emp1
Ncam1
Atp8a1
Dnajc24
Ccdc57
Creb5
Dnajb5
Zbed5
Cfap20
Chmp5
Bag1
Sf3b2
Cyp2u1
Mon1b
Ttc26
Cnpy3
Taco1
Med6
Cebpa
Myl12b
Siah1b
Rab5if
Cdk2ap2
Arid1a
Calcoco1
Rwdd1
Srsf7
Dad1
Abhd4
Itgb3bp
Efcab7
Creld2
Alg12
Zdhhc16
Exosc1
Manf
Aacs
Spag7
Nup133
Kdsr
Rraga
Mcoln1
Ivd
Hip1
Kif1b
Gcnt2
Cabin1
Tmem167b
Wdr90
Nqo1
Rplp0
Ahcyl2
Cdk5
Rer1
Morn1
Mtmr6
Btbd8
Lyrm1
Dcun1d3
Ppwd1
Cenpk
Ppp1r11
Man1b1
Cdyl
Ppox
Fra10ac1
Inava
Rpl9
Lias
Ttc4
Rbbp5
Cnnm2
Klhdc4
H2bc7
H2ac7
Cox7a2
Egr2
Fitm2
Ttbk2
Swsap1
Chadl
Rbbp9
Tbccd1
Dnajb11
Tox4
Rab2b
Umad1
Rpa3
Tbp
Tmem198
Chpf
Os9
Limch1
Mideas
Tbcb
Polr2i
Atf6
Msantd4
Golph3l
Mnt
Hspa4
Pxmp4
Gsk3b
Rrm1
Oip5
Nusap1
Gpr173
Fam227b
Dtwd1
Snx12
Vamp4
Snx17
Eif2b4
Wtap
Mxd4
Rbm15
Cfap77
Cep135
Zkscan1
Phb
Fbxo5
Cacng2
Gnaz
Eapp
Txnl4b
Dhx38
Crem
Ylpm1
Mbd3
Insr
Fbxw5
C8g
Polq
Rptor
Tmem41b
Tjp2
Rtkn
Tpp2
Ncln
Ankrd39
Prmt5
Micu2
Psmd4
Sfpq
Zfp866
Gm3448
Gm3417
Tcte3
Ermard
Fbxl15
Ypel5
Gpatch8
Cox18
Sec22b
Pnisr
Cpsf1
Ap3d1
Ube2a
Dusp6
Gtpbp1
Pkn3
Neil3
Cstf1
Aurka
Ccdc130
Vcp
Xylb
Ap3m2
Psmd5
Glcci1
Tatdn3
Nsl1
Nsrp1
Taf9
Rad17
Ak6
Nudt15
Hdac10
Pibf1
Dis3
Tasp1
Colgalt1
Mmadhc
Mlec
Scin
Mphosph8
Ogt
Nxt1
Mrpl3
Atad2
Zc3h6
9530077C05Rik
Kctd7
Ppm1b
Ddx18
Mnat1
Pygo2
Gpx1
Stag1
Akap11
Pcbp2
Incenp
Fnbp4
Ints12
Gstcd
Ankef1
Tnpo1
Gm12258
Ap4e1
Klk10
Slc66a2
Xrcc5
Ssc5d
Far1
Shisa5
Ip6k1
Slc35b1
Nelfa
Pafah2
Hltf
Ddx39a
Gtf2i
Bub1
Cdk11b
Prcc
Slc25a42
Nfyb
Fubp3
Fuz
Pxk
Ino80
Actr1a
Gtf2b
Fbxw8
Vta1
Prepl
Camkmt
Atp5g2
Timm10
H3f3b
Samd4b
Gmfg
Rap2a
Zbtb22
Pms1
Ormdl1
Rpl3
Srd5a1
Nsun2
Akap13
Mdm2
Tmem242
Mpv17l2
Abca3
Abca17
Tcp1
Mrpl18
1110051M20Rik
Ptma
Slc39a13
Zfp719
Rad1
Brix1
Leng1
Lca5
Fkbp14
Ankrd11
Dmap1
Gatb
Tfpt
Prpf31
Rab5c
Etf1
Tyk2
Kbtbd3
Aasdhppt
Pigc
4930558K02Rik
Mtmr4
Zfp809
Cops4
Usp2
Srp68
Sec13
Tprn
Banp
Ahctf1
Nfe2l1
Rbsn
Tafa5
Tars2
Ufl1
Usp30
Dynll1
Alpk1
Kctd5
Rtn4
Acap2
Ddx10
Hnrnpul1