ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142046 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◣ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Alg14
Gm29733
Fgf5
Cldn34d
Scn5a
Gatad2a
Tcf20
Cd38
Fcgr3
Tcstv3
Urm1
Gm4861
Frem2
Eno1
Atrn
Slc25a4
A930007A09Rik
Zfp964
Snrnp70
Kcna7
Smc6
Gen1
Scap
Cul5
Pabpc1
Wrap53
Trp53
Enpp4
Olfr1163
Epha2
Ufsp1
Ache
Mecom
Letmd1
Pitx3
Gbf1
Pm20d2
Mkx
Clec2h
Lypla1
Olfr138
Colec12
Scamp2
Man2a2
Irgm1
Ywhae
Tbc1d5
Gata4
Zcrb1
Pphln1
Slc9a1
Donson
Pmaip1
Abl1
Chka
Ginm1
Gid4
Prelid3a
Mcl1
Znrf1
Mycn
Slc7a7
Zfp428
Epha1
Wipi2
Apc
Mllt10
Pacsin2
Ints9
Hmbox1
Pou5f1
Itm2b
Mphosph8
Grb2
Rbp7
Bmerb1
Rbm47
Coro2a
Tmed7
Eif1a
Rnf220
Chd1
Notch2
Faiml
Cep70
Zfp978
Plcxd1
Gtpbp6
Spata24
Prob1
Mup4
Otx2
Acp5
Fbxl7
Qpct
Pxdc1
Ptprz1
Prdm4
Smim8
Faim
Polg2
Ddx5
Cep95
Slc37a3
Rab19
Tmprss12
Atoh1
Lin9
Pdcd2
Lama1
Ctbp2
Lrrn4
Nwd1
Zfp937
Oga
Tmem121
Tagln3
Rp2
Irgm2
Dpp10
Nkiras2
Dnajc7
Wsb2
Trabd
Abcd4
Olfr1028
E030030I06Rik
Raet1e
Raet1a
H3c3
H2bc3
H1f2
Rbm17
Hinfp
C2cd2l
Galnt16
Fbxo5
Gja1
Tal2
Tmem181a
Zfp9
Setd5
Rps6ka3
Efemp1
Zfp600
Coq2
Cd37
Slc6a16
Slc12a4
Ubtf
Arfgef1
Cfap300
Pdia3
Catsper2
Igdcc4
H2-DMa
Brd2
Frmpd1
Apbb2
Asxl1
Sema6a
LTO1
Thpo
Polr2h
Clcn2
Chrd
Mrpl23
Abl2
Emb
Ddx20
Usp13
BC034090
Ralb
Sfxn2
Arl3
Zfp980
Ifitm7
Adnp2
Mab21l1
Golm2
Ankrd36
Uggt1
Mbp
Ms4a10
Zfp267
Zdhhc6
Vti1a
Klf5
Nsrp1
Dop1b
Gnai1
Msc
Tsga10
Lipt1
Elobl
Coil
Flywch1
Anxa4
Wdr59
H4c14
H3c13
H2bc18
Mterf1b
Rtl8c
Mpig6b
Ly6g6c
Ddah2
Clic1
Ppp2ca
Elovl5
Zfp442
Tmem63a
Lefty1
Brox
Aida
Ephx2
Mterf1a
Exoc6b
Trim62
Sbk1
Atxn3
Tnni3
Dnaaf3
Snx6
Itpkc
Coq8b
Ptpra
Reep2
Tmco4
Rnf186
Kif5c
Uqcr11
Mbd3
Mios
B3gnt7
Nudt1
Ctxn2
Cstf1
Aurka
Sptb
G2e3
Setd1b
Rhof
Sox1
Acpp
Rrp36
Mea1
Klhdc3
Deptor
Esrrg
Trim33
Dmtn
Fgf17
Hoxa2
Sp5
Ncs1
App
Tmem161a
Ncor2
Asah2
Naa16
Mtrf1
Rnf125
Nedd4l
Mcidas
Ccno
Slc25a17
Gdpgp1
Cib1
Klhl1
Arl2
Cdh5
Nbea
Mapre2
Dync1i2
Ror1
Zfp981
Gprc5d
Teddm1a
Glul
Ubr1
Tmem62
Zbtb25
Zbtb1
Strn3
Ap4s1
Ndrg1
Prkag1
Rnf8
Il17rd
Ednrb
Glod5
Marchf7
Sh3rf1
Lhpp
3300002I08Rik
2300009A05Rik
Zfp36
Plekhg2
Smad7
Hoxb13
Mmp25
Zbtb22
Tapbp
Rgl2
Rmi1
Hnrnpk
Garre1
Mrc2
Kcnn2
Ano10
Dctn3
Arid3c
Sigmar1
Trappc1
Kcnab3
Cntrob
Lsmem2
Ifrd2
Cox5a
Spty2d1
Hmga1b
Hmga1
AI413582
Ect2l
Tmc7
Pou2f2
Vezt
Fgd6
Hif3a
Osbp2
Gjc1
Soga3
Commd4
Neil1
Pou2f1
Zfp868
Mpped2
Trh
Slc44a3
Rmnd5b
Arap2
Crb2
Flrt2
Pald1
Klhdc8b
Ccdc71
Slc16a9
Ccdc60
H3c15
H3c14
H2ac19
H2ac18
Espn
Myo10
Usp32
Arhgap32
P3h1
AU022252
Hook2
Junb
Pgrmc2
Mnx1
Chrac1
Mapk4
Mdm4
Slco5a1
Tbc1d9
P3h2
Llgl2
Mfap1b
Rpl12
Lrsam1
Phlpp2
Scd1
Mapk3
Gdpd3
Pde3a
Phc2
Mmp9
Prickle1
Prmt9
Ccdc30
Zmynd12
Ppcs
Nat8f6
Nat8f5
B3gnt4
Cryzl2
Ifitm1
Nrf1
Olfr813
Olfr812
Tdrd3
Pef1
Kdm2b
Ncdn
AU040320
Fam227b
Dtwd1
Mre11a
Ankrd49
1700012B09Rik
Abr
Cerkl
Marcks
Spata31
Cntnap3
Ptch2
Tmem63b
Mrpl14
Olfr1034
Apoe
Apoc1
Coa7
Ppp3cb
Pvr
Cacnb2
Fis1
Mllt6
Msh6
Usp37
Cnot9
Lhx5
Lrrc8d
Rnf213
Zfp979
Slc35f2
Cdkn2c
Ptdss2
Bahd1
Zfp64
Pdxdc1
Mpv17l
Hivep2
Glra1
Asap2
Slc19a3
Rpp14
Htd2
Fads1
Sh2d5
H3f3a
Smad4
Lrrn2
Rif1
Tmem59l
Crlf1
Slc26a8
Mapk14
Cdhr1
Tanc1
Gm7932
Cxxc5
Pramel13
Spint1
Ppp1r14d
Zfp976
Eps8
H2az2
Wdr61
Smim5
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Meaf6
Tmem42
Timm44
Exd2
T2
Rgs12
Amotl2
Frzb
Mt1
Mt2
Glrx2
Rtl8b
Pla2g7
Casc3
Rev3l
Lama5
Pelp1
Vrtn
Cox7a2
Pms1
Ormdl1
Fahd2a
Jakmip1
Slain2
Slc12a2
Snx16
Terf2
Gpsm2
Bcl7b
Crocc
Smarca1
Fgf8
Npm3
Fam214a
Krba1
Stc2
Syne1
Obsl1
Inha
D3Ertd751e
Smim6
Bcl10
Rtn4rl1
Dph1
Ssh1
Galnt12
Padi6
Dcaf11
Kctd6
Pnrc1
Poll
Dpcd
Pcif1
Ptpn14
Fam50b
Snn
Duxbl3
Duxbl2
Duxbl1
Ipo8
Ino80
Olfr539
Usp36
Lhfpl2
Zfp62
Vrk1
Pes1
Pcmtd2
Fstl1
Tmeff1
Mreg
Septin1
Tbc1d10b
Mylpf
Spg20
B4galnt2
Olfr1339
Asap1
Pum1
Fnta
Cma2
Epb41l1
1700122O11Rik
Mup6
Ghitm
Rheb
Trappc5
Mcemp1
Fcor
Usp44
Syt2
Epp13
Gngt2
Abi3
Ncoa1
Ago3
Tor3a
Tab1
Aktip
Znhit2
Tm7sf2
Mrpl49
Fau
Axl
Prl2b1
Smarcd1
Ppp2r5b
Gpha2
Atg2a
Chgb
Hsdl1
Dnaaf1
Mllt1
Cpsf4l
Nkx2-5
Trim72
Chid1
Eomes
Ndufaf4
Zbtb7b
Lenep
Fgl1
Zfp341
Pxmp4
Cacng7
Tha1
Proser2
Iars2
Bpnt1
Cd9
Tfeb
Utp15
Ankra2
Tmem178
Rps6ka5
Cachd1
4930474N05Rik
Slc25a22
Rplp2
Pidd1
Cend1
Ptk7
Abca8b
Adam22
Pdgfd
Rtkn
Dlc1
Foxj2
Eloa
Ppat
Paics
Zkscan5
Zkscan14
Scaf11
Mboat1
Tulp4
Zfp119b
Yju2
Ebi3
B3gnt2
Stx11
Stk32a
Hs3st5
Slc9a3
Mthfd2l
Gpr162
Kif13b
Serpinf2
Rab4a
Hdac1
Mrps15
Dhx32
Cyp51
Ss18l2
Sec22c
Kctd9
Cdca2
Cacng2
Ttc21b
Tcf7l2
Rplp0
Gcn1
Mapk8
Cep63
Anapc13
BC048679
Ap3b2
Hectd1
Mzt1
Bora
Car14
Tmem131l
B4galt2
Atp6v0b
Dph2
Zfp787
Il1rapl1
Dynll2
Fam118a
Trmt1
Nacc1
Dspp
Ccn2
Foxa2
Hcfc2
Glt8d2
Tle4
Cpt1a
Hnrnpa2b1
Cbx3
Rbm45
Cyct
Pcbp1
Serp1
Eif2a
Ceacam13
Nphp3
Shoc2
Bbip1
Cep112
Gm9736
Gm29802
Phf10
Nyap1
Tsc22d4
2610528J11Rik
Capg
Krt42
Krt17
Set
Rps21
Pdrg1
Sphkap
2210016F16Rik
Usp10
Il17d
Dnajc10
Prex1
Cyp4x1
Ugp2
Zfp991
Ubtd1
Mms19
Mcf2l
Fgf6
Ptdss1
Mterf3
Numa1
Prss30
Tpd52
Tpm1
Cdkl2
Kctd12
Tor4a
Afp
Trip12
Fbxo36
Brinp1
Ptprg
Rassf7
Phrf1
Lmntd2
Epn3
Wnt3
Pitpnm1
Cdk2ap2
Rsph4a
Iqch
Aagab
Zfp39
Gdap1l1
Lzts2
Twnk
Mrpl43
Gli2
C1ql1
Btbd3
Erdr1
Kcnj6
Cnn3
Defb5
Defb46
Ralgds
Macroh2a2
Rest
Olfr829
Ropn1l
Ust
Lrrc8b
Tgfbr3
Serpini1
Pdcd10
Parp6
Zfp784
Shc1
Flad1
Cks1b
Bcl6
BC107364
Adgra2
Ap2m1
Fgd1
Epb41
Slc14a1
Rps6ka2
Radil
Ttc9b
Camk1d
H6pd
Prkab1
Gimap3
AB010352
Cdkn2aip
Csnk2a1
Klc3
Ckm
Aff3
Actn1
Tchh
Baz1b
Chrna9
Med16
Zyg11a
Trim25
Prkar1a
Tef
Psd3
Prmt8
Dmap1
Exosc6
Lamp1
Ghr
Ltb4r2
Ltb4r1
Cideb
Txndc12
Btf3l4
Sema4d
Gmnc
Ksr2
Arhgap29
Gapvd1
R3hdm2
Inhbc
Mmp15
Olfr212
Pdp2
Rragc
Cd24a
Malt1
Olfr484
Phf20
Coa4
Shroom3
Ccdc158
Dmrta2
Clcn4
Slc35d1
Cnbp
Utp14b
Acsl3
Slc5a6
Cad
Atraid
D5Ertd579e
Socs2
Zfp286
Cyp27a1
Stmn1
Zgrf1
Larp7
6820408C15Rik
Zcchc3
5730409E04Rik
Msx1
Mad2l2
Draxin
Clasp2
Gsx1
Spink2
Fhl3
Sf3a3
Rprd2
Eif4e
Slc4a2
Cdk5
Pcdh8
Ost4
Emilin1
Enpp3
Pcbp2
Pik3ip1
Ctrl
Wdr91
Mtfp1
Tbl1xr1
Cuedc2
Psd
Fbxl15
Rragd
Tmem229a
Tmem121b
Ube2d1
Olfr960
Cep55
Sugt1
Psmb10
Lcat
Nkx3-2
Col5a1
Cand2
Cfc1
Tctex1d4
Plk3
Btbd19
Retreg1
Tmem198
Chpf
Sirt7
Mafg
Zfhx3
Suz12
Tbc1d4
Smarcd3
Utp23
Neil2
Tdgf1
Lrrc2
Sec22b
Cdh1
Ptch1
Ndufa4l2
Trim68
Stac3
Jund
Iqcn
Zfp423
Xpo6
Capns2
Adnp
Shox2
Pnkd
Rsrc1
Faap20
Gpbar1
Aamp
C2cd2
Csrp2
P4hb
Arhgdia
Chst15
Hapln4
Mael
Cmtr2
Cnot2
Nectin2
Vti1b
Camk2n1
Tmem123
Cfhr3
Map1lc3a
Ubr5
Tgfbr1
Rtcb
Zdhhc20
Tatdn3
Nsl1
Pdpr
Steap3
Ubxn2a
Atad2b
H2-T-ps
Pkm
Loxl3
Dok1
Hoxc13
Nfatc3
Epm2a
Speg
Mrgbp
Srd5a3
Dab1
Lpo
Khdrbs1
Tvp23a
Setdb2
Gm45935
Cab39l
Fbp1
Dennd1a
Dhrs7b
Prol1
L3mbtl2
Gtf2a2
Mtcl1
Pygo2
Pbxip1
Nmnat3
Tcirg1
Ndufs8
Trim7
Trim41
Dmkn
Pik3r3
Pllp
Mapkapk5
Cltc
Nefh
Ap1b1
Rnaset2b
Rnaset2a
Zfp513
Snx17
Eif2b4
A330070K13Rik
Klhl34
Ppp6r1
Slc23a1
Moxd1
Lgmn
Gtf3c4
Ddx31
Smtn
Ypel2
Sowahc
Septin10
Sall4
Pdpn
Rock2
Ccdc9
Sp1
Rbpjl