ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142055 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◣ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Cldn34d
Gm29733
Alg14
Tcstv3
Ginm1
Gm9736
Gm29802
Gdap1l1
Ufsp1
Ache
Trabd
Gata4
Gm3233
Eno1
Igsf6
Car14
Atrn
Cd38
Myc
Dop1b
Man2a2
Add1
Gm9639
Gm3250
Mesp1
Rbp7
Zfp775
Capn2
Gatad2a
Arid3a
Gm19668
Gid4
Brox
Aida
Letmd1
Znrf1
Macroh2a2
Ppp1r16a
Kifc2
Foxh1
Cyhr1
Fgfr2
Rnf220
Gm3285
Gm10318
Gm36176
Notch2
Tfpi
Coa7
Wrap53
Trp53
E030030I06Rik
Sh2d5
Donson
Prdm4
Lama1
Man1c1
Meox1
Gnai1
Igdcc4
Sbk1
Igsf8
Atp1a2
Tbc1d5
Tmc7
Galnt16
Pdgfra
Gm10100
Krtap12-1
Tor1b
Pabpc1
Zfp964
Tox3
Krtap10-4
Krtap10-10
Zfp532
Spata24
Prob1
Mapk3
Gdpd3
Vezt
Fgd6
Hdhd5
Apbb2
Ubtf
Abl1
Colec12
Grin2c
Smtnl2
Mn1
Ywhae
Nrp2
Smc6
Gen1
Cul5
Il17rd
Rxra
Frmpd1
Sparcl1
Mphosph8
Asxl1
Setd5
Fcgr3
Cx3cl1
Tnni1
Mrpl23
Slc9a1
Mkx
Rbm24
Inf2
Ints9
Hmbox1
Ddx20
Klhl1
Pik3ip1
Ptch1
Hcfc2
Glt8d2
Nudt1
Susd2
Acp5
Raet1e
Raet1a
Tspear
Gm9508
Gm19402
Gm10272
Dleu7
Pacsin2
Slc26a8
Mapk14
Tenm4
Ccdc102a
Adgrg5
Atoh8
Mrc2
Efcc1
Chd1
Grid2ip
Marchf7
Rtkn
Wdr54
1700003E16Rik
Irgm2
Coq2
Arfgef1
Snx6
Prelid3a
Hoxb1
Arl2
Ptprz1
Lef1
Scamp2
Kcna2
Lrig3
Mios
H2bc6
H1f4
Ndufaf4
Rasgrp3
Prr5
Flywch1
Clip4
Pcp4
Scn5a
Chst15
Pigv
Ptpra
Tdrd3
Fgl1
Gm4861
Ccdc97
Prrx2
Fbxl7
Qpct
Mpig6b
Ly6g6c
Ddah2
Clic1
C4bp
Sfxn2
Arl3
Gse1
Spn
Wdr59
Ect2l
Grb2
Zfp9
Fbxo5
Lamb3
Phlpp2
Gfra2
1700122O11Rik
Srrm4
Foxp1
Adad2
Usp13
Tagln3
Elovl5
Hsd11b2
Apc
Sp5
D3Ertd751e
Ifitm1
Urm1
Dbh
Tmem121b
Zdhhc6
Vti1a
Tulp4
Gm9507
Gm2696
Adgra2
Mllt10
Prkag1
Pcif1
H3f3a
Tmem121
Marcks
Itm2b
Epb41
Spty2d1
Acot11
Mapre2
Mpped2
Atoh1
Arhgap32
Nostrin
Adnp2
Pdia3
Catsper2
Meis3
Enpp4
Sorbs3
Gmnc
Mrc1
Prdm1
Gdpgp1
Cib1
Faim
Pou2f2
Rp2
Terf2
H3c3
H2bc3
H1f2
Zfp975
Chrac1
Plekha7
Teddm1a
Glul
Ptch2
Ppp2r5b
Gpha2
Atg2a
Calr4
Ncoa1
Krtap3-3
Krtap3-2
Krtap3-1
Ptf1a
Slc12a4
Uqcr11
Mbd3
Iqch
Aagab
Exoc6b
2300009A05Rik
Rassf7
Phrf1
Lmntd2
Stra6
Casz1
Abl2
Nkiras2
Dnajc7
Ubr1
Tmem62
Ano10
Tanc1
Frzb
Gpsm2
Slc11a1
Wbp4
Elf1
Kmt5c
Cox6b2
Gm3238
Apool
Kcnma1
Pbk
Polg2
Ddx5
Cep95
Arg1
Acvrl1
Prickle1
Gpr179
Ugp2
Omp
Oga
Zfp976
Sh3rf1
Hipk2
Wdr91
Col13a1
Septin8
Pou4f1
Setd1b
Rhof
Foxj2
Abca9
Sort1
Wipi2
Il6ra
Hoxb3
Hoxb2
Plb1
Cfc1
Olfr138
Septin1
Tbc1d10b
Mylpf
Ndrg1
Igdcc3
Ssh1
Nbea
Cacng2
Cdkn2aip
Actn1
Ppp2ca
Mdga1
Ccn2
Tmem63b
Mrpl14
Erdr1
Atxn3
Tff3
Pdcd2
Pxdc1
Coro2a
Rnf125
Ptk7
Phf10
Arhgap42
Fam227b
Dtwd1
Lrrfip1
Mthfd2l
Garnl3
Mapk8
Obsl1
Inha
Zfp91
Lpxn
Slc37a3
Rab19
Klf5
Zbtb22
Tapbp
Rgl2
Zbtb25
Zbtb1
Tsga10
Lipt1
Fam117a
Ccdc186
Hes7
Aloxe3
B3gnt2
Dynll2
Ypel1
Pum1
Duxbl3
Duxbl2
Duxbl1
Cachd1
Tmco4
Rnf186
R3hdm2
Inhbc
Fads2
Nedd4l
Ncdn
AU040320
Dlc1
Tmem119
Rheb
Arap2
Pgrmc2
Nova1
Hoxa2
Acta1
Rprml
Lyzl6
Ralb
Mllt1
Tle4
Hs3st3a1
Slc14a1
Flacc1
Appl2
Vsir
Dennd1a
Tef
Fstl1
Olfr539
Fnta
Elobl
Coil
H2az2
Prl2b1
Lzts2
Twnk
Mrpl43
Fbp1
Pdxdc1
Mpv17l
Stc2
Serpina12
Elmo1
Csrp2
App
Trappc5
Mcemp1
Fcor
Efna3
Garre1
Faiml
Cep70
Rpp14
Htd2
D5Ertd579e
Slc25a44
Ednrb
Ext1
Pdp2
Brinp1
Erc1
Lefty2
Spink4
Mecom
Zfp277
Dock4
Smad7
Sema6a
Slc16a9
G2e3
Tmed7
Eif1a
Mab21l1
Snai1
Calu
Cyp2a5
Pnrc1
Cxxc5
Ywhag
Lin9
Cd24a
Sod3
Gas1
Tmem222
Spry2
Ccdc30
Zmynd12
Ppcs
Cox5a
Tbc1d9
Pde3a
Zfp868
Tmprss12
Zkscan5
Zkscan14
Golm2
Ppp2r3a
B4galt2
Atp6v0b
Dph2
Tcf7l2
Cacng7
Speg
Adcyap1
Abca8b
Zfp36l2
Tgfbr1
C1ql1
Tmem42
Lfng
Thpo
Polr2h
Clcn2
Chrd
Znhit2
Tm7sf2
Mrpl49
Fau
Dach1
Igsf23
Got2
Cpox
Prnp
Prn
Naa16
Mtrf1
Slc18a3
Chat
Mreg
Chid1
Usp32
Accs
Kif5c
Rtcb
Spg20
Tmub1
Agap3
Fastk
Asap2
Adnp
Sh2d6
P3h1
AU022252
Nhsl2
Bcl7b
Rpl37a
Parp6
Smarcd3
Lima1
Trappc1
Kcnab3
Cntrob
Pkm
Flrt2
Hmga1b
Hmga1
AI413582
Snn
Eif4e
Rest
Ebf2
Hnrnpa2b1
Cbx3
Pdpr
Wdr61
Pald1
Slc13a1
Rbm47
Adamts20
BC034090
Atp1b2
Dnajc10
Ccdc60
Bcl10
Lrrc8d
Cfap300
Proser2
Pax3
H3c15
H3c14
H2ac19
H2ac18
Soga3
Vrk1
Inafm2
Phc2
Foxf1
Trmt1
Nacc1
Rcsd1
Dtx1
Pitx3
Gbf1
Hapln4
Tmem229a
Neurog3
Zfp62
Mdm4
Tnnc1
Sema3g
Nkx2-5
Epb41l2
Mterf1a
Uaca
Fn1
Msra
Btbd3
Setx
Slc44a3
Gna14
Ulk3
Cplx3
Epn3
Asap1
Shroom3
Ccdc158
Cpt1a
Fgf6
Hgsnat
Gpr160
Prom1
Thsd7a
Tha1
Abr
Snrnp70
Trim36
Clcn4
P3h2
Zfand6
Rbms1
Fscn1
Reep2
Lrrc38
Krt40
Fam178b
Cox5b
Ctdsp2
Slc43a2
Gk5
Ap1g2
Gm2237
Olfr893
Cyth1
Cand2
Ccdc66
Tmem131l
Tab1
Mad2l2
Draxin
Lrp2
Atg5
Mtfp1
Ptdss2
Chga
Hook2
Spag4
Dusp4
Stx11
Kcnq3
Shoc2
Bbip1
Tgfb2
Gm7932
Sugt1
6820408C15Rik
Zcchc3
Ehd1
Rmi1
Hnrnpk
Zhx1
Hdac1
Lpgat1
Ankdd1b
Caps2
Glipr1l3
Cxxc4
H4c14
H3c13
H2bc18
Kdm2b
Ntn1
Iqcf6
Rnase4
Ang
Cdyl
Glra1
Tcf20
Ppp1ccb
Ppp1cc
Raph1
Cers3
Glis2
Kctd9
Cdca2
Pcdh19
Togaram1
Klhl28
4931429L15Rik
Dcaf11
Ptpn14
Kctd12
Prtg
Sun1
Nwd1
AA414768
Krba1
Kmt2a
Pbx1
Csrp1
Prmt9
Flnc
Neurl1a
Rnf8
Gm11559
Gm11568
Krtap9-1
Aktip
Atp1a1
Nit2
Usp37
Cnot9
Cuedc2
Psd
Fbxl15
Zfp286
Neil1
Nphp3
Tmcc2
Lamb1
Shc1
Pygo2
Pbxip1
Dupd1
Fbxw4
Ttc21b
Bloc1s5
Cd37
Slc6a16
Ptpdc1
Ssbp2
Mlxip
Slc22a6
Clasp2
Armc4
Prkab1
Ncor2
Usp36
Retnla
B3gnt4
Tpm1
Vpreb3
Gm867
Lhx1
Mterf1b
Trim68
Jak2
Itpkc
Coq8b
Gna13
Gm17660
Smarce1
S1pr5
Lifr
Phf20
Gsx1
Dab2ip
Atp11b
Hectd1
Mob4
Rnaseh2b
Glrx3
Schip1
Per3
Ct55
Anks6
Col26a1
Trio
Epha2
Umad1
Rpa3
Nkx2-2
2510009E07Rik
Mamstr
Foxo6
Aff1
Casc3
Utp15
Ankra2
Angpt4
Nudt9
Zbtb18
Aqp7
Pdik1l
Axin2
Mapk4
Slc25a47
Pvr
Zfp687
Ncoa2
Raf1
Rrm2
Grip1
Slc35g2
Slc36a4
Camta2
Meis1
Sirt7
Mafg
Tbc1d4
Ulk2
Wnt2
Zfpm1
Rmdn1
Cpne3
Gm10267
Btbd7
Gbx2
Sf3a1
Ccdc157
Slain2
Krtap4-16
Serpini1
Pdcd10
Map3k20
Slc7a7
Adck5
Scrt2
Bcl6
Tmem239
Cpxm1
1700020A23Rik
Ralgds
C2cd2
Col5a1
Pkn2
Zfp319
Usb1
Sowahc
Septin10
Lrrn1
Hes6
Rad51ap1
D6Wsu163e
Mbp
Trip10
Gpr108
Zfp787
Vdac3
Mogat2
Epha5
Pax7
Dph5
Arhgap6
Pm20d2
Hsbp1l1
Slc66a2
Trerf1
Cand1
Mycbp2
Zdhhc2
Epha4
Nkx3-2
Clcn7
Mansc1
Borcs5
Foxa1
Zdhhc20
Sall4
Zfhx3
Fahd2a
Rbpjl
Matn4
Tlr2
Scd1
Slc25a22
Rplp2
Pidd1
Cend1
Akt2
Dctn4
Ankrd36
Dtnbp1
Slc12a2
Ust
Scaf11
Zscan30
Zfp35
Fjx1
Mical1
Lgmn
Ghitm
Dctn3
Arid3c
Zbtb12
Ehmt2
Mthfd2
Mob1a
Pfkfb2
Greb1
Yod1
Dpf3
Jade1
B4galt7
Tmed9
Pcmt1
Lats1
Osr1
Itga10
Tspan2
Cd209a
Olfr1339
Pik3r3
2700081O15Rik
Brwd1
Dbx2
Gpr142
Epha1
Zeb2
Exd2
Adm
Mzb1
Plekhh1
Ppm1j
Tafa3
Itgb7
Syt2
Mfap3l
Gm20346
Anp32a
Ppdpf
Ndnf
Fbrsl1
Immp2l
Msh5
Msh6
Triobp
Hmx3
Hmx2
Soat1
Oacyl
Cited2
Zmynd8
Tbl1xr1
Slc4a2
Cdk5
Dgkh
Xrra1
Spcs2
Alox8
Sulf1
Tmem161a
Fbxo11
Taf6l
Polr2g
Coa4
Hoxb13
Kcnj4
Lrrc4b
Tal2
Srd5a3
Pdrg1
Cd47
Septin2
Hdlbp
Onecut2
Rab4a
Scd2
Epop
Gm21149
Mt1
Mt2
Rab11fip1
Smarca1
Dmap1
Nynrin
Otud4
Chia1
Foxa2
Fbxl19
Rnasek
Bcl6b
0610010K14Rik
Wnt2b
Timm50
Dll3
Rdh5
Cd63
Cfap20dc
Smtn
Kcnn2
Picalm
Slc31a1
Fkbp15
Rbm45
Cyct
Sdc4
2310022B05Rik
Msx1
Rybp
Wdr86
Ntng1
Grk2
Sorcs3
Cort
Spint1
Ppp1r14d
Tcirg1
Ndufs8
Slc25a24
Coch
Lrrc10
Pramel13
Syne2
Cct2
Tnfrsf9
Park7
Pde5a
Pelp1
Mylip
Gm3739
Napepld