ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Zic3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◣ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Cd38
Cldn34d
Gatad2a
Tcstv3
Slc25a4
Ufsp1
Letmd1
Znrf1
Pabpc1
Atrn
Smc6
Gen1
Eno1
Acp5
Gid4
Wrap53
Trp53
Asxl1
Prdm4
Slc7a7
Fgf5
Mphosph8
Man2a2
Lypla1
Spata24
Mup4
Mycn
Zcrb1
Pphln1
Slc6a16
Cd37
Setd5
Arfgef1
Gm4861
Ywhae
Tmem181a
Vezt
Fgd6
Zfp964
Wsb2
Trabd
Donson
Apbb2
Zfp978
Lama1
Colec12
Tbc1d5
Brox
Aida
Qpct
Rnf125
Grb2
Sbk1
Abl1
Fbxo5
Ccdc30
Apc
Lsmem2
Exoc6b
Sfxn2
Arl3
Enpp4
Rnf220
Chd1
Rbm47
Cerkl
Wdr59
Ubr5
Pitx3
Gbf1
Slc12a4
Mdm4
Trim62
Pacsin2
Faim
Notch2
Ints9
Hmbox1
Mkx
Ptprz1
Oga
Myo10
Car14
Slc16a9
Itm2b
Ndrg1
Arap2
Mreg
Ptpra
Gata4
Slc37a3
Rab19
Tagln3
Slc15a1
Serpini1
Pdcd10
Mbp
Mrpl23
Coq2
Marchf7
Mllt10
Cep70
Tmco4
Pef1
G2e3
Irgm1
Mbd3
Polg2
Setd1b
Mpped2
Ddx20
Ncdn
AU040320
Zfp9
Tbc1d9
B3gnt7
Adgra2
Tmem62
H1f2
Glul
Ubtf
Terf2
Tmed7
Eif1a
Gdap1l1
Nkiras2
Dnajc7
Mios
Rheb
E030030I06Rik
Flywch1
Prkag1
Cul5
Wipi2
Tmem131l
R3hdm2
Sh2d5
Ptch2
Cdh1
Adnp2
Kif17
Hoxa2
Ddah2
Mab21l1
Pou5f1
Pdcd2
Ror1
Rif1
Pou2f1
Tfeb
Pde3a
Sp5
Asap2
Macroh2a2
Kif13b
Chrac1
Hes7
Dnaaf3
Slc26a8
Mapk14
Sh3rf1
Arid3c
Rmnd5b
Ppp2ca
Atxn3
Lrrn2
Trim72
Zdhhc6
Vti1a
Irgm2
Pcif1
Pmaip1
Slc12a2
Pxdc1
Rpp14
Htd2
Hcfc2
Gja1
Dynll2
Plcxd1
Cuedc1
Mib2
Arl2
Nudt1
Cdhr1
H3f3a
Fbxl7
Defb46
Dhx32
Sptb
Prelid3a
Tprn
Smad7
Golm2
Pvr
Tbc1d10b
Mylpf
Rtcb
App
Agfg1
Onecut2
Rps6ka3
Nphp3
Kdm2b
Cep112
Tulp4
Alg13
Esrrg
Coro2a
Gjc1
Hoxb13
Tdrd3
Hook2
Arhgap32
Tmem121
Tmc7
Abl2
Trim7
Zbtb25
Zbtb1
Ifitm7
Bmerb1
Stmn1
Tanc1
Ccn2
Mllt6
Mea1
Klhdc3
Slc35f2
Prickle1
Ppp2r5b
Frzb
Flrt2
Klf5
Mapk4
Lhx1
Gli2
Sema6a
Slco5a1
Trh
Soga3
Smarcd1
Fam107a
Marcks
Pdp2
Mybph
Chid1
Rps6ka5
Shoc2
Bbip1
Tsga10
Slc13a2
Kctd6
Asah2
Setx
Mcf2l
Pik3r3
Zfp36
Tgfbr1
Zfp64
Coil
H2az2
Mterf1b
Ralb
Dnmt3a
Ncoa1
Hnrnpa2b1
Cbx3
Garre1
Ankle2
Syne1
Ncs1
Usp13
D030056L22Rik
P3h1
AU022252
Stx11
Mllt1
Snn
Cacng2
Arhgap42
C1ql1
Fnta
Mterf1a
Neurog3
D630039A03Rik
Fam227b
Dtwd1
Tada1
Fam53b
Zfp868
Kif5c
Mmp25
Shroom3
Capg
Med12l
D3Ertd751e
Gm10318
Fahd2a
Ccdc60
Tfpi
Lefty1
Hsd11b2
Hif3a
D5Ertd579e
Ndufaf4
Pnrc1
Slc39a4
Mapre2
Lrrc8d
Gna13
Casc3
Cort
Klhl1
Rab4a
Dcaf11
Pdia3
Catsper2
Ryr2
Trim36
Exd2
Loxl3
Dok1
Msc
Tmem63b
Mrpl14
Ifitm1
Cdkl2
4930474N05Rik
Olfr1034
Hnrnpdl
Enoph1
Slc14a1
Cep55
Rtkn
Rtn4rl1
Dph1
Zbtb7b
Rassf8
Phf10
Zfp976
Trappc5
Fcor
Cdkn2aip
Ccno
Ssh1
Trmt1
Nacc1
Ptch1
Usp37
Cnot9
Snx17
Eif2b4
Zfp982
Cachd1
Rmi1
Hnrnpk
Gm9736
Stk32a
Snrnp70
Rragc
Grid2ip
T2
Prrc2b
Wdr61
Lifr
Slc25a22
Set
Smyd4
Rpa1
Cpsf4l
Olfr52
Snai1
Parp6
Ms4a10
Jarid2
Vrk1
Cd47
Ppp2r3a
Rnf8
Gsx1
Bcl10
Hdac1
Crocc
Lsm14b
Tigar
Pdpk1
Fkbp14
Rgs12
Slc9a3
Slc9a3r1
Smad4
Mt1
Scd1
Hipk2
Usp10
Nr2f6
Vrtn
Cpt1a
Emb
Gdpgp1
Cib1
Sema4b
Prnp
Prn
Cspp1
Cops5
Ypel1
Tmem59l
Crlf1
Tdgf1
Lrrc2
H2-DMa
Brd2
Foxp1
Zdhhc2
Rtl8c
Gm9639
Gm19668
Oplah
Zfp980
Kcnj4
Fstl1
Inafm2
Agtrap
Lrrn4
Lama5
Chst15
Cds1
Phlpp2
Tfap2c
Msh6
Dennd1a
Zbtb22
Tapbp
B3gnt2
Gm3285
Tbl1xr1
Cox5a
Zfand6
Slc25a17
Fgf6
Ube2d1
Itpkc
Coq8b
Nkx2-5
Hsdl1
Dnaaf1
Tmeff1
Gne
Espn
Zfp62
Radil
Psmb10
Ctrl
Plekha7
Spry2
Jakmip1
Fam118a
Zfp991
Ackr3
Tox3
Umad1
Rpa3
Trip12
Fbxo36
Smarca1
Lrrc8b
Anks6
Foxa2
Ppp1r16a
Foxh1
Unc5b
Rest
Pik3cd
Tor4a
Tctex1d1
Mthfd2l
Nid2
Timm44
Epp13
Asap1
Aoc3
Zfp341
Cic
Trim25
Fgfr2
Serpinf2
Mrps23
Ost4
Tab1
Ropn1l
Meaf6
Ust
Gpsm2
Prkar1a
Castor1
Gm3250
Togaram1
Klhl28
Dnttip2
Rps10
Actn1
Ctr9
Enpp3
B3gnt4
Spag4
Pgrmc2
Pelp1
Pdrg1
C77080
Ap1g2
Ywhag
Col13a1
Akip1
Slc4a5
Usp36
Pdgfra
Cst3
Klhdc8b
Ccdc71
Spg20
Zfp267
Prmt9
Phf12
Gpr179
Znhit2
Mrpl49
Fau
Duxbl3
Duxbl2
Duxbl1
Zhx1
Dmtn
Mturn
Abcc4
Ttc21b
Enah
Tmem117
Trp53bp1
Plaat3
Epha1
Tle4
Schip1
Inha
Scrt2
Ncor2
Ptms
Ap2m1
Tal2
Hmga1b
Hmga1
Tcte2
Afdn
Glra1
Mov10
Proser2
Speer4f1
Sbk2
Mafg
Phc2
Mamstr
Ephx2
Gngt2
Abi3
Cltb
Tmem42
Srd5a3
Rassf4
Hic1
Magi1
Pygo2
Ppp1r36
Zyg11a
Pramel13
Nefh
Ap1b1
Erfl
Obsl1
Naa16
Cfap300
Prex1
Max
Mbtps2
Zfp36l1
Spred1
Phldb1
Meox1
Ttc28
Mapk8
Mapk3
AI413582
Gpr108
Cd300lg
Syde2
Foxf1
Mtap
Abca8b
Pdpr
Ndrg4
Ptk7
Pald1
B4galt2
Atp6v0b
Flacc1
Cd24a
Shc1
Cks1b
Strn3
Ap4s1
Gbx2
Tle6
Smarce1
Atg5
Kazn
Ift140
Cramp1l
Slc7a9
Dpp10
Fam136a
Mnx1
Sec22b
Cep63
Anapc13
Unkl
BC003965
Fbrsl1
Spint1
Adam22
Skil
Pum1
Chmp4c
Bcl6
2300009A05Rik
Ptpdc1
Napepld
Kcnn2
Cmas
Cd55
Plcb4
Abi2
Slc4a2
Rasgef1a
Cdk5
Rtl8b
Vdac3
Stk38
Il17rd
Tent5c
Sall4
Ccer2
Tpst2
Slc25a44
Aktip
Polr2h
Klf6
Rev3l
C2cd2
Fn1
Kank2
Mmp15
Pitpnm1
Cdk2ap2
Mrps15
Plk3
Lzts2
Tvp23a
Dab2ip
Arrb1
Timm9
2700049A03Rik
Cd63
Apoe
Parp12
Csrp1
Itga9
Gab1
Bcl7b
Rcsd1
Bag3
Cx3cl1
Foxd2
Suz12
Rasgrp2
Kcnc2
Uhrf2
Rock2
Akt2
Ttc9b
Olfr1028
Ptpn14
Cyp51
Nup85
Clip4
Hmgxb4
Csn1s2a
Trim68
Spef1
Mpc1
Gja4
Nodal
C4bp
Utp14b
Acsl3
Spink2
Col27a1
Igfbpl1
Rbm24
Phf20
Prom1
Sox2
Mtfr1l
Pbk
Sec22c
Gm9508
Baz1b
Osbp2
Dab1
Slc17a5
Nrf1
Brinp1
Pdxdc1
Mpv17l
Picalm
Lag3
Epb41l1
Sulf1
Gzme
Syne2
Tsc22d3
2210016F16Rik
Hivep2
Med4
Adamts7
Gab2
Gm3233
Olfr813
Ltc4s
Efemp1
Tafa3
Ppm1j
Trim8
Ednrb
Nfix
Tpd52
H3c13
H2bc18
Tfg
Zfp36l2
Neil1
Chn1
Immp2l
Plekhg5
Setdb2
Nsrp1
Gm45935
Cab39l
Got2
4930402H24Rik
Has3
Sumo3
Dhrs7b
Galnt12
Poll
Dpcd
Tmem161a
Rybp
Pcbp2
Prmt8
Slc25a47
Recql4
Lrrc14
Dctn4
Rbpjl
Matn4
Tle2
Fads1
Zbtb34
Atp11b
Nat8f5
Hes3
Coa4
Per3
Camkk1
Jade2
Steap3
Kcnq3
Hinfp
Zfp91
Lpxn
Rffl
Lpgat1
Reep2
Slc30a10
Stc2
Ptpn3
Smad6
Pik3r4
Gabrb3
Slco4c1
Gimap3
Slc31a1
Fkbp15
Ccdc9
Bhlhe40
2510009E07Rik
Slc66a2
Tigd4
Rbm45
Lgmn
Pdha1
Tcirg1
Trip10
Ptdss1
Mterf3
Acta1
Nbea
Ppp1ccb
Ppp1cc
Fam178b
Cand2
Jade3
Krtap10-4
Tenm4
Zbtb8a
Kcnc1
Tmem229a
Hectd1
Rprd2
Scaf11
Kctd9
Cdca2
Atp1a2
Tef
Numa1
Mad2l2
Plin3
Kcnab3
Zfp687
Slc46a3
A630095N17Rik
Csnk2a1
Camk1d
Zscan10
Zfp13
Zfat
Slc22a23
Mtfp1
Phyhipl
Nadk2
Ppat
Dyrk4
Klhl34
Phc1
Ctif
Appl2
Yod1
Pfkfb2
Sdc1
H2-T-ps
Epha4
Ptdss2
Smarcd3
Pms1
Ormdl1
Acot11
Col26a1
Prr5
Snx15
Fam241b
Dgkd
Ctf1
Bcl7c
Pkm
Mgat1
Slc30a9
Psd
Fbxl15
Paics
Gtf3c4
Ddx31
Ralgps2
Csrp2
Gadd45g
Rrbp1
Nkx2-2
Mtarc1
Cdk6
1700008O03Rik
Rab33b
Nanos3
Cluh
Wnt11
Tspear
Gm19402
Jund
Iqcn
Fndc3b
Trmt61a
Cox8b
Mnt
Abr
Dnajc10
Zfp532
Trim33
Ksr2
Chrna9
Tusc1
Srpr
Lax1
Foxred1
Etv6
Mkrn2
Smim1
H3c15
H3c14
H2ac19
H2ac18
Slc44a4
Zfp600
Otop1
Gm9507
Gm2696
Igsf23
Slc9a9
Mesp1
Mettl14
Rab37
Tbx1
Cfc1
Hey1
Klhl13
Dusp4
Dll4
Dsn1
Plekhf1
Maz
Vmn1r1
Sp2
Hmgb3
Zfp839
Tmem121b
Nmnat3
Ubl3
Tdh
Hr
Socs5
Ezh1
Socs2
Arhgef3
Alg9
C1ql3
Utp15
Nkx3-2
Ankra2
Cxxc5
Rnf122
Npm3
Fgf8
Krtap10-10
Tbx20
Uhrf1bp1
Tmem104
Nat9
AI661453
1700001C19Rik
Wdr86
Tmem256
Nlgn2
Dnajc21
Slc25a24
Hspb1
Ltb4r2
Ltb4r1
Cideb
Cenpb
Kcng3
Slc25a1
Tiparp
Clasp1
Fam169b
Spdef
Ckb
Caprin1
Ppp1r14a
Hnrnpr
Tlr2
Mob4
Dpf3
Zkscan17
Frg2f1
Foxj3
Commd4
Fignl2
Rcc2
Mrc1
Wbp4
Elf1
Nampt