ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Zic3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◣ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Alg14
Gm29733
Cd38
Cldn34d
Gatad2a
Urm1
Tcstv3
Slc25a4
Ufsp1
Ache
Scn5a
Frem2
Letmd1
A930007A09Rik
Znrf1
Pabpc1
Atrn
Smc6
Gen1
Eno1
Prdm4
Epha2
Acp5
Gid4
Wrap53
Trp53
Asxl1
Zfp428
Slc7a7
Fgf5
Spata24
Mphosph8
Man2a2
Bmerb1
Lypla1
Epha1
Tmem181a
Prob1
Otx2
Mup4
Mycn
Cd37
Zcrb1
Pphln1
Slc6a16
Setd5
Arfgef1
Gm4861
Ywhae
Wsb2
Vezt
Fgd6
Zfp964
Trabd
Galnt16
Donson
Frmpd1
Lama1
Chka
Wdr59
Apbb2
Zfp978
Colec12
Tbc1d5
Apc
Thpo
Polr2h
Clcn2
Slc9a1
Nedd4l
Brox
Aida
Qpct
Rnf125
Grb2
Sbk1
Lef1
Rnf220
Abl1
E030030I06Rik
Fbxo5
Mcl1
Ccdc30
Mecom
Lsmem2
Ifrd2
Zfp710
Exoc6b
Sfxn2
Arl3
Enpp4
Chrd
Ginm1
Chd1
Tcf20
Rbm47
Cerkl
Ino80
Ubr5
Cd9
Ndrg1
Pitx3
Gbf1
Slc12a4
Fcgr3
Mdm4
Igdcc4
Nwd1
Ctbp2
Trim62
Myo10
Pacsin2
Atoh1
Faim
Notch2
Ints9
Hmbox1
Mkx
Oga
Ptprz1
Llgl2
Olfr1339
Dop1b
Pef1
Rbp7
Car14
Il17rd
Slc16a9
Itm2b
Mbp
Arap2
Mreg
Mfap1b
Ptpra
B3gnt7
Ubtf
Gata4
Setd1b
Slc37a3
Rab19
Tagln3
Mrc2
Slc15a1
Ano10
Zmynd12
Serpini1
Ppcs
Pdcd10
Uggt1
Hinfp
Mrpl23
Coq2
Marchf7
Mllt10
Faiml
Cep70
Tmco4
Rnf186
G2e3
Irgm1
Zfp991
Pm20d2
Uqcr11
Mbd3
Polg2
Ddx5
Cep95
Rhof
Hook2
Mpped2
Ddx20
Ncdn
AU040320
Zfp9
Tbc1d9
Kif17
Gdap1l1
Adgra2
Ubr1
Tmem62
H3c3
H2bc3
H1f2
Ifitm7
Teddm1a
Glul
Raet1e
Raet1a
Mtcl1
Terf2
Ceacam13
Tmed7
Eif1a
Rnf213
Nkiras2
Dnajc7
Snx6
Mios
Rheb
Flywch1
Prkag1
Ncor2
Cul5
Wipi2
Ect2l
Tmem131l
Tulp4
R3hdm2
Sh2d5
Ptch2
Cdh1
Sox1
Adnp2
Mybph
Hoxa2
Mpig6b
Ly6g6c
Ddah2
Clic1
Smim8
Pou2f2
Mab21l1
Pou5f1
Pdcd2
Ror1
Rif1
Pou2f1
Tfeb
Pde3a
Sp5
Asap2
Macroh2a2
Kif13b
Chrac1
Fgd1
Septin1
Hes7
Aloxe3
Erdr1
Tnni3
Dnaaf3
Slc26a8
Mapk14
Sh3rf1
Dctn3
Arid3c
Rmnd5b
Ppp2ca
Atxn3
Amotl2
C2cd2l
Lrrn2
Rp2
Trim72
Zdhhc6
Vti1a
Irgm2
Pcif1
Pmaip1
Glod5
Slc12a2
Pxdc1
Rpp14
Htd2
Usp13
Hcfc2
Glt8d2
Clec2h
Gja1
Dynll2
Plcxd1
Gtpbp6
Cuedc1
Mib2
Arl2
Coa7
Nudt1
Rpl12
Lrsam1
Cdhr1
Zdhhc20
H3f3a
Fbxl7
Defb5
Defb46
Smad7
Dhx32
Kdm2b
Scamp2
LTO1
Sptb
Prkci
Prelid3a
Gm9736
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Foxj2
Golm2
Pvr
Tbc1d10b
Mylpf
Hoxb13
Inhbc
Prickle1
Rtcb
App
Gm29802
Smarcd1
Glrx2
Agfg1
Rrp36
Mea1
Klhdc3
Anxa4
1700122O11Rik
Onecut2
Tal2
Glra1
Elovl5
Rps6ka3
Nphp3
Cep112
Alg13
Esrrg
Scap
Coro2a
Gjc1
Grhl3
Tdrd3
Junb
Tmc7
Arhgap32
Tmem121
Abl2
Trim7
Trim41
Zbtb25
Zbtb1
Stmn1
Tanc1
Ccn2
Mllt6
Spty2d1
Slc35f2
Ppp2r5b
Gpha2
Atg2a
Frzb
Flrt2
Abcd4
Klf5
Dlc1
Mapk4
Lhx1
Trim25
Crb2
BC034090
Gli2
Sema6a
Slco5a1
Trh
Soga3
Fam107a
Marcks
Pdp2
Deptor
Kctd6
Ankrd36
Chil1
Chid1
Rps6ka5
Shoc2
Bbip1
Tsga10
Lipt1
Slc13a2
Asah2
Hmga1b
Hmga1
AI413582
Setx
Mcf2l
Ccdc60
Pik3r3
Zfp36
Plekhg2
4921524J17Rik
Hif3a
Tgfbr1
Zfp64
Elobl
Coil
H2az2
Mterf1b
Ralb
Dnmt3a
Ncoa1
Hnrnpa2b1
Cbx3
Garre1
Ankle2
Syne1
Rcor2
Gnai1
Lhpp
Ncs1
D030056L22Rik
P3h1
AU022252
Stx11
Mllt1
Snn
Sigmar1
Glis2
Cacng2
Arhgap42
Gm9639
C1ql1
Gm3285
Gm10318
Ifitm1
Fnta
Hnrnpdl
Enoph1
Mterf1a
Myc
Jarid2
Rab37
Neurog3
D630039A03Rik
Fam227b
Dtwd1
Tada1
Mzt1
Bora
Fam53b
Zfp868
Tmprss12
Kif5c
Gmnc
Mmp25
Shroom3
Sall4
Capg
Sema4b
Med12l
D3Ertd751e
Rtkn
Gm36176
Fahd2a
Lhx5
Tfpi
Kcnj4
Tmem63a
Lefty1
Zbtb22
Hsd11b2
Gdpgp1
Cib1
Gm7932
Ccdc158
D5Ertd579e
Zmynd8
Ndufaf4
Pnrc1
Vps28
Slc39a4
Cpsf1
Mapre2
Zbtb7b
Lrrc8d
Gna13
Casc3
Pik3ip1
Cort
Cmip
Olfr138
Wwc2
Klhl1
Gm3233
Rab4a
Dcaf11
Pdia3
Catsper2
Fbp1
Ryr2
Zgrf1
Larp7
Trim36
Exd2
Fgfr2
Loxl3
Dok1
Msc
Tmem63b
Mrpl14
Cdkl2
Macroh2a1
Ptch1
4930474N05Rik
Lama5
Olfr1034
Slc14a1
Cep55
Castor1
Rtn4rl1
Dph1
Snai1
Olfr1163
Rassf8
Phf10
Percc1
BC003965
Zfp976
Trappc5
Mcemp1
Fcor
Fam118a
Cdkn2aip
Mcidas
Ccno
Ssh1
Ap1g2
Trmt1
Nacc1
Usp37
Cnot9
Zfp513
Snx17
Eif2b4
Zfp982
Cachd1
Rmi1
Hnrnpk
Stk32a
Snrnp70
Rragc
Grid2ip
Gpr162
Adnp
Acpp
T2
Prrc2b
Rbm17
Gbx2
Cltb
Slc9a3r1
Plekha7
Shc1
Wdr61
Kcnj6
Lifr
Slc25a22
Set
Rplp2
Pidd1
Cend1
Smyd4
Rpa1
Cpsf4l
Olfr52
Olfr1044
Parp6
Nefh
Ap1b1
Ms4a10
Vrk1
Zfand6
Cd47
Ppp2r3a
Rnf8
Galnt15
Gsx1
Nrp2
Bcl10
Hdac1
Crocc
Lsm14b
Jakmip1
Tigar
Pdpk1
Plekha8
Fkbp14
Rgs12
Slc9a3
Smad4
Mt1
Scd1
Iqch
Aagab
Spint1
Ppp1r14d
Syt2
Hipk2
Usp10
Nr2f6
Vrtn
Cpt1a
Emb
Rabggtb
Khdrbs1
Tbc1d16
Ccdc40
Ctrl
Lhfpl2
Prnp
Prn
Cspp1
Cops5
Ypel1
Tmem59l
Crlf1
Tdgf1
Lrrc2
Ndrg4
H2-DMa
Brd2
Mt2
Cdh5
Foxp1
Phlpp2
Zdhhc2
Rtl8c
Gm19668
Oplah
Zfp980
Fstl1
Inafm2
Tpst2
Rapgef1
Agtrap
Lrrn4
Chst15
Cds1
Agpat5
Tfap2c
Olfr90
Msh6
Dennd1a
Tapbp
B3gnt2
Wdr91
Tbl1xr1
Cox5a
Nutm2
Slc25a17
Fgf6
Ube2d1
Itpkc
Coq8b
Nkx2-5
Olfr539
Hsdl1
Dnaaf1
Tmeff1
Pik3cd
Ptms
Lag3
Cxxc5
Mif
Gne
Espn
Zfp62
Socs3
Radil
Psmb10
Lcat
Spry2
Ackr3
Tox3
Umad1
Rpa3
Trmt61a
Ckb
Trip12
Fbxo36
Smarca1
Lrrc8b
Hebp1
Anks6
Camk2n1
Klrb1b
Foxa2
Ppp1r16a
Kifc2
Foxh1
Cyhr1
Unc5b
Schip1
Rest
Nkx2-2
Tor3a
Hdhd5
Rps10
Tor4a
Tctex1d1
Lenep
Spef1
Cenpb
Rps21
Gprc5d
Cox7a2
Mthfd2l
Mnt
Nid2
Timm44
Epp13
Asap1
Aoc3
Aoc2
Ost4
Cdkn2c
Fgr
Zfp341
Pxmp4
Mup6
Cic
Ywhag
Serpinf2
Cuedc2
Tha1
Tspear
Mrps23
Gm3250
Emilin1
Abhd11
Tab1
Ropn1l
Meaf6
Ust
Gpsm2
Prkar1a
Togaram1
Klhl28
Dnttip2
Man1c1
Actn1
Rassf7
Phrf1
Lmntd2
Ctr9
Enpp3
B3gnt4
Spag4
Pgrmc2
Pelp1
Hsbp1l1
Pdrg1
C77080
Col13a1
Akip1
Pald1
Phc2
Slc4a5
Usp36
Krtap10-4
Krtap10-10
Tenm4
Pdgfra
Cst3
Klhdc8b
Ccdc71
Rgl2
Add1
Spg20
Zfp267
Prmt9
Phf12
Gpr179
Znhit2
Tm7sf2
Mrpl49
Fau
Gm9508
Gm19402
Duxbl3
Duxbl2
Duxbl1
Zhx1
Dmtn
Mturn
Ascl4
Abcc4
Ttc21b
Mical1
Fgl1
Dll4
Enah
Sirt7
Mafg
Smarcd3
Kazn
H2bl1
Tmem117
Trp53bp1
Plaat3
Tle4
Obsl1
Inha
Scrt2
Ap2m1
Eomes
Nectin2
Fgf17
Tcte2
Afdn
Mov10
2510009E07Rik
Proser2
Afp
Speer4f1
Sbk3
Sbk2
Smtnl2
Mamstr
Zfp532
Ephx2
Gngt2
Abi3
Spaca4
Fam83e
Zfp423
Tle6
Tmem42
Srd5a3
Rassf4
Hic1
Mdfic
Btbd3
Mtfr1l
Magi1
Tead1
Pygo2
Pbxip1
Ppp1r36
Bhlhe40
Zyg11a
Garnl3
Pramel13
Erfl
Ndufa4l2
Cstf1
Aurka
Naa16
Mtrf1
Cfap300
Prex1
Max
Mbtps2
Ntn1
Zfp36l1
Slc37a1
Spred1
Phldb1
Meox1
Igsf8
Ttc28
Mapk8
Mapk3
Gdpd3
Trip10
Gpr108
Cd300lg
Syde2
Foxf1
Mtap
Abca8b
Pdpr
Ptk7
Mmp9
B4galt2
Atp6v0b
Dph2
Flacc1
Cd24a
Prkab1
Flad1
Cks1b
Strn3
Ap4s1
Lin9
Smarce1
Atg5
Ift140
Cramp1l
Slc7a9
Dpp10
Snrpg
Fam136a
Mnx1
Sec22b
Cep63
Anapc13
Msx1
Rasgrp2
Unkl
Fbrsl1
Zfhx3
Tvp23a
Lzts2
Adam22
Skil
Pum1
Chn1
Chmp4c
Bcl6
2300009A05Rik
Ptpdc1
Napepld
Kcnn2
Cmas
Cd55
Plcb4
Abi2
Slc4a2
Rasgef1a
Cdk5
Rtl8b
Vdac3
Arid3a
Stk38
Hmgxb4
Kcnma1
Nyap1
Tent5c
Ccer2
Twf2
Slc25a44
Aktip
Ralgds
Cma2
Klf6
Rev3l
C2cd2
Fn1
Lgmn
Kank2
Hnrnpr
Mmp15
Nanos3
8030462N17Rik
Pitpnm1
Cdk2ap2
Mrps15
Twnk
Tctex1d4
Plk3
Mrpl43
Btbd19
Ovca2
Dab2ip
Arrb1
Timm9
2700049A03Rik
Rdh5
Cd63
Apoe
Apoc1
Ushbp1
Parp12
Csrp1
Itga9
Gab1
Bcl7b
Rcsd1
Bag3
Mtfp1
Ctdsp2
Cx3cl1
Gja4
Foxd2
Zbp1
Suz12
Pcgf5
Per3
Ankdd1b
Kcnc2
Uhrf2
Rock2
Akt2
Ttc9b
Olfr1028
Nuak2
Ptpn14
Cyp51
Ss18l2
Sec22c
Nup85
Clip4
Ppm1j
Msl1
Csn1s2a
Trim68
Fads1
Nsrp1
Mpc1