ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546914 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◣ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Txndc11
Znrf1
A930007A09Rik
Etfbkmt
Slc25a4
Frmpd1
Frem2
Pabpc1
Wrap53
Trp53
Letmd1
Mup4
Slc15a1
Wsb2
Cldn34d
Urm1
Gatad2a
Setd5
Prdm4
Ascl4
Vezt
Fgd6
Ncdn
AU040320
Acp5
Bmerb1
Ifitm7
Gja1
Zcrb1
Pphln1
Cd37
Slc6a16
Gm29733
Nedd4l
Asxl1
Eno1
Tmem181a
Chka
Mcl1
Rheb
Oga
Trim72
Cd38
Mphosph8
Atrn
Kif17
Spata24
Prob1
4921524J17Rik
Lama1
Prkag1
Zfp428
Scn5a
Gid4
Apbb2
Epha1
Hook2
Man2a2
Colec12
Coro2a
Nphp3
Pacsin2
Rcor2
Wdr59
Dhx32
Rassf8
Setd1b
Rhof
Terf2
D630039A03Rik
Sfxn2
Arl3
Uqcr11
Mbd3
H3f3a
Exoc6b
Zfp710
Zfp964
Smc6
Gen1
Rragc
Defb5
Defb46
Atxn3
Ywhae
Mios
Epha2
Tagln3
Hnrnpdl
Enoph1
Rnf213
Mpig6b
Ly6g6c
Ddah2
Clic1
Otx2
Tmed7
Eif1a
Ubr5
Nwd1
LTO1
Tulp4
Arfgef1
Lifr
Ino80
Ufsp1
Ache
Donson
Cd9
Rif1
Dynll2
Abl1
B3gnt7
Mtcl1
Llgl2
Fahd2a
Prkci
Alg13
Tmprss12
Hinfp
C2cd2l
Lypla1
Abcc4
Radil
Gm4861
Stmn1
Slc7a7
Prelid3a
Hoxb13
Prnp
Prn
Sox1
Bcl10
Ubr1
Tmem62
Erdr1
Dnttip2
Myo10
Fgd1
Klf5
Tet1
Rnf125
Slc37a3
Rab19
Ndufa4l2
Stac3
Ptprz1
Lrrc8b
Fcgr3
D5Ertd579e
Rybp
Hoxa2
Tcstv3
Ift140
Cramp1l
Notch2
Pou2f2
Flywch1
Polg2
Ddx5
Cep95
Mrc2
Trim25
Ddx20
Ccdc30
Zmynd12
Ppcs
Qpct
Togaram1
Klhl28
Mllt1
Rab37
Slc9a3r1
G2e3
Thpo
Polr2h
Clcn2
Brox
Aida
Chrd
Arl2
Tmem131l
E030030I06Rik
Adnp2
Zfp978
Ndrg1
B3gnt4
Atg5
Dhrs7b
Adgra2
Pef1
Chd1
Zscan10
Zfp13
Slc26a8
Mapk14
Med12l
Prkar1a
Rpp14
Htd2
Gpr162
Slc9a1
Mrps15
Mycn
Parp6
H3c3
H2bc3
H1f2
Tdrd3
Olfr90
Hic1
Ovca2
Smim8
Apc
Slc25a22
Rplp2
Pidd1
Cend1
Lax1
Sptb
Spef1
Cenpb
Cdc25b
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Tbx3
Sbk1
Pvr
Col26a1
Ptch2
Zfand6
Gne
Parp12
Shoc2
Bbip1
D030056L22Rik
Ptpra
Olfr1339
Tfeb
Vrk1
Tbc1d9
Coq2
Grhl3
Macroh2a1
Rab4a
Snx15
Sac3d1
Atoh1
Mettl21a
Tbc1d5
Tlx2
Pcgf1
Lbx2
Gsx1
Dnmt3a
Def6
Ppp2r3a
Trappc5
Mcemp1
Fcor
Mab21l1
Sbk3
Sbk2
Usp37
Cnot9
App
Cdkn2aip
Soga3
Mllt6
Snn
Agtrap
Gipc1
Ptger1
Slc31a1
Fkbp15
Lef1
Cmas
R3hdm2
Inhbc
Mreg
Smad6
Rnf122
Ceacam13
Dcaf11
Chrac1
Cd300lg
Zfp9
Sh3rf1
Pdp2
Nodal
Ppp2ca
Pcif1
Unc5b
Zdhhc2
Ect2l
Fbrsl1
Glrx2
Enpp4
Zfp532
Zdhhc6
Vti1a
Rest
Ccdc9
Serpini1
Pdcd10
Rps10
Kcnj4
D3Ertd751e
Fbxo5
Nefh
Ap1b1
Cds1
Hsdl1
Dnaaf1
Mrpl23
Prrc2b
Ralb
Hmgxb4
Glra1
Bnip3l
Tmco4
Rnf186
Grb2
Faiml
Cep70
Rrp36
Mea1
Klhdc3
Ccn2
Cbll1
Glis2
Dgkd
Snrpg
Fam136a
Ubc
Dlc1
Zbtb45
Trim28
Znfx1
Pdcd2
Wbp11
Smco3
BC049715
Trmt61a
Ckb
Lpgat1
Hmga1b
Hmga1
AI413582
Ano10
Coa4
Tmem170b
Cdc16
Mterf1a
Asap2
Golm2
Spag4
Isl1
Abl2
Zhx1
Fam227b
Dtwd1
Scaf11
Gdap1
Usp5
Cdca3
Epha4
Slc12a4
8030462N17Rik
Zfp36
Plekhg2
Tmeff1
Ido1
Dyrk4
Gzme
H2az2
Mup6
Gpld1
Aldh5a1
Zfp513
Snx17
Eif2b4
Mib2
Nutm2
Cldn14
Racgap1
Nkx2-6
Il17rd
Ints9
Hmbox1
Cecr2
Lsmem2
Ifrd2
Fubp3
Slc16a9
Umad1
Rpa3
Dop1b
Pxdc1
Tgm1
Rabggta
Ap1g2
Klhdc8b
Ccdc71
Mtfr1l
Max
Chid1
Actr10
Jade2
Ror1
Phyhipl
Plcxd1
Gtpbp6
A630095N17Rik
Dnajb2
Tuba4a
Znhit2
Tm7sf2
Mrpl49
Fau
Faim
Rtcb
Lgmn
Exd2
Mt1
Mt2
Camkk1
Slc17a5
Ndrg4
Pitpnm1
Cdk2ap2
Ptms
Lag3
Timm44
Phf12
Tsga10
Lipt1
Smyd4
Rpa1
2210016F16Rik
Zfp868
Spast
Itm2b
Flrt2
Nadsyn1
Dhcr7
Smad7
Cep192
Mturn
Plekha7
Cox8b
Pdlim5
Dctn3
Arid3c
Sigmar1
Arhgap32
Slc25a1
Zbtb8a
Rap2a
Elobl
Coil
Marchf7
Pmaip1
Hcfc2
Glt8d2
Slc35f2
Dpf3
Arhgap19
Mapkapk5
Cdkl2
Chn1
Picalm
Csn1s2a
Atp2c2
Steap3
Etv6
P3h1
AU022252
Gmeb2
Shc1
Ms4a10
Pygo2
Pbxip1
Tcea3
Slco5a1
Castor1
Hspb1
Uggt1
Ccdc60
Zfp982
Vdac3
Cmip
4930474N05Rik
Slc4a2
Cdk5
Poll
Dpcd
Socs2
Olfr871
Cep63
Anapc13
Ryr2
Tvp23a
Olfr1034
Smad4
Hipk2
Cerkl
Mterf1b
C1ql1
Klrb1b
Pitx3
Gbf1
Klhl13
Fignl2
Ankle2
Pdha1
Fam118a
Tent5c
Tha1
Tmem235
Cdc45
Pnrc1
Pus3
Ddx25
Hes3
Icmt
Cit
Fbxl7
Cspp1
Cops5
Mettl9
Rbm47
Caprin1
Trabd
Hnrnpa2b1
Cbx3
Mamstr
Cd300e
Clasp2
Ppp1ccb
Ppp1cc
Pik3r3
Sirt7
Mafg
Wiz
Tmtc4
Midn
Atp5d
Nfix
Rpl12
Lrsam1
Akr1b8
Ttc9b
Fam161a
Slc12a2
T2
Rnf103
Pdia3
Catsper2
Ttc21b
Tpst2
Glod5
Cep112
Gjc1
Sp2
Nr2f6
Mnx1
Ushbp1
Kctd6
Oplah
Ube2d1
Akt2
Hdac1
Tdp2
Acot13
Glra3
Raet1e
Raet1a
Lrrn2
Ust
Rpp38
Acbd7
Cul5
Pdrg1
Cds2
Snx10
Foxd2
Rpp40
Tom1
Recql4
Mfsd3
Lrrc14
Arf2
Nsf
Kcnt1
Gli2
Arhgap42
Msh6
B3gnt2
Zbtb25
Zbtb1
B4galt2
Atp6v0b
Dph2
Slc22a17
Fam168a
Nkiras2
Dnajc7
Cenpa
Prr36
Lrrc8e
Bhlhe40
Fads1
Lama5
Mkrn2os
Mkrn2
Zdhhc20
Irgm1
Ttc28
Slc22a23
Pfkfb2
Zbtb34
Yod1
Tssk5
Hgh1
Gna13
Cuedc2
Psd
Fbxl15
Ltc4s
Trh
Pm20d2
Slc13a2
Ankrd6
Pex5
Rmnd5b
Pgrmc2
Klhl2
Abcc1
Ctbp2
Cacng2
Lrrn4
Fndc3b
Unk
H3f3b
Rbp7
Dab1
Txndc12
Btf3l4
Sgce
Peg10
Pxk
H3c15
H3c14
H2ac19
H2ac18
Cfl1
Csnk2a2
Ptch1
Cluh
Rcc2
Vstm2l
Ap2m1
Ntng1
Slc5a1
Kcnq3
Nup85
Hey1
Denr
Ephb3
Setdb2
Gm45935
Cab39l
Prrt4
Rbm28
Atad3a
Elovl5
Tbl1xr1
Ctif
Dnase2a
Klf1
Gcdh
Kcnj6
Cpsf4l
Tmem42
Tmem151b
Actl6b
Ppfia1
Enah
Stk38
Timm9
2700049A03Rik
Lrrc8d
Xkr4
Trim7
Trim41
Nfyb
Rad51ap1
D6Wsu163e
Mapk4
Zfp991
Garre1
Mxra8
Dvl1
Pnkd
Ubfd1
Ears2
Gpbar1
Aamp
Tecpr2
Cinp
Mrps35
Smarce1
Axin1
Nanos3
Tcte2
Afdn
Slc25a44
Tubgcp6
Hdac10
Clec2h
Rassf7
Phrf1
Lmntd2
Ppfibp1
Jarid2
Brinp1
Jund
Iqcn
Igdcc4
Setx
Dus2
Ddx28
Ppp2r5b
Gpha2
Atg2a
Plekha5
Ubtf
Camk2n1
Cdk13
Orai1
Ssh1
Rapgef1
Msc
Percc1
BC003965
Unkl
Ahdc1
Cnot11
Hif3a
Suclg2
Phf11d
Cuedc1
Tmem63b
Mrpl14
Fam178b
Cox5b
Tnnc2
Ube2c
Mbtps2
Xpo6
Trmt1l
Swt1
Cd55
Rasa2
Nup188
Dolk
Gprc5d
Hcn4
Poc1b
Galnt4
Ginm1
Cort
Mael
Zfp64
Pdpk1
Bloc1s5
Marcks
Snai1
Prickle1
Anxa4
Col27a1
BC034090
Bcl6
Zfat
Tbx20
Klhl30
Nrp2
Prss8
Onecut2
Ywhag
Tab1
Bcap31
Abcd1
Tpd52
Dmrtc2
Rps19
Lypd4
Nfatc1
Wipi2
Naa16
Mtrf1
Rwdd2b
Ltn1
Zfp628
Nat14
Ssc5d
Gprc5a
Fam102a
Ddx3x
Timp2
Asah2
Kpnb1
H4c14
H3c13
H2bc18
Ccnd1
Gpbp1
Mylk2
Ghitm
Zfp62
Tmem51
Sf3a1
Ccdc157
Pigk
Rsbn1
Atg14
Prmt9
Srd5a3
Hpgd
Zfp72
Iars2
Bpnt1
Reep5
Wnt3a
Slc24a1
Ints14
Mkx
Trim8
Dsn1
Bod1l
Dok5
Spred1
Mok
Zfp839
Pllp
Slc14a1
Cd47
Gpcpd1
Rnf220
Pdpr
Mdfic
Olfr212
Nkx2-5
Acbd5
Ncoa1
Per3
Hectd1
Aoc3
Aoc2
Dis3l
Zic3
Nuak2
Klhdc8a
Exosc6
C1ql3
Zfp217
Rps21
Napepld
Wdr61
Dnah2
Mpzl1
Atp1a1
Aff3
Smim1
Mnt
Ninj1
Erbin
Immp2l
4930402H24Rik
Sumo3
Utp15
Ankra2
Gcnt4
Hacd3
Cdr2l
Dnajc6
Mllt10
Rhbdf1
Mpg
Spx
Klf11
Map2k1
Wwc2
Garnl3
Mettl14
Sap18b
Sap18
Cdhr1
Smarcd1
Rtn4rl1
Dph1
Ccpg1os
Ccpg1
Gpd1
Csde1
Stx11
Ghrh
Fnta
Map7d1
Ptges2
Lcn2
Mtmr12
Pyurf
Txlng
Macroh2a2
Sh3gl3
Igfbp2
Amotl2
Trip10
Gpr108
H2-M5
Zfp57
Fam53b
Mfap3l
Set
Tmem104
Nat9
Nfatc3
Wdr34
Gdap1l1
Tmc8
Tmc6
Ripor2
Rnf44
Cdhr2
Mapk8
Rrbp1
Pck1
Kin
Atp5c1
Smarca1
Cox7a2
Nrros
Capg
Pkm
Snx6
Zfp976
Grid2ip
Meaf6
Ube3c
Uhrf1bp1
Zscan30
Zfp35
Mier2
Sco1
Adprm
Trim62
Arap2
Igfbpl1
Cltb
Rev3l
Btbd3
Mfsd13b
Cdr2
Mfap1b
Shroom3
Ccdc158
Phc2
Tctex1d4
Plk3
Btbd19
Mdk
Chrm4
Ggps1
Arid4b
Sox14
Teddm1a
Glul
Rabggtb
Afg1l
Rara
Catip
Tgfbr3l
Snapc2
Ctxn1
En2
Gclm
Crb2
Trim36
Crocc
Plekha8
Fkbp14
Khdrbs1
Trim68
Sun1