ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057958 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◣ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Gm29733
Cd38
Tcf20
Alg14
Frem2
Atrn
Cldn34d
Tcstv3
Gatad2a
Fgf5
Smc6
Gen1
Urm1
A930007A09Rik
Zfp428
Eno1
Scn5a
Pabpc1
Sbk1
Gid4
Lypla1
Asxl1
Ufsp1
Ache
Letmd1
Otx2
Ctbp2
Zcrb1
Pphln1
Mecom
Enpp4
Hinfp
C2cd2l
Epha2
Man2a2
Slc7a7
Chka
Cd37
Slc6a16
Mcl1
Grb2
Zfp980
Mphosph8
Igdcc4
Mkx
Tal2
Ints9
Hmbox1
Gm4861
Pm20d2
Abcd4
Znrf1
Irgm1
Coq2
Wrap53
Trp53
Slc37a3
Rab19
Rbm47
Ywhae
Donson
Wsb2
Wipi2
Lama1
Mup4
Slc9a1
Slc25a4
Pacsin2
Ubtf
Itm2b
Tbc1d5
Pitx3
Gbf1
Snrnp70
Kcna7
Bmerb1
Pcif1
Fbxo5
Slc12a4
Trabd
Prdm4
Apbb2
Cul5
Tmem63a
Lefty1
Frzb
Ptprz1
Mllt10
Lef1
Thpo
Polr2h
Clcn2
Chrd
Vezt
Fgd6
Ror1
Fcgr3
Stmn1
Oga
Arfgef1
Zfp964
Rnf220
Scap
Epha1
Apc
Ppp2ca
Marchf7
Kdm2b
Spata24
Prob1
Mmp25
Adnp2
Exoc6b
Phf10
Colec12
Atoh1
Nedd4l
Rp2
Mrc2
Olfr1163
Mycn
Mdm4
Inafm2
Cd9
Rbp7
Mrpl23
Mcidas
Ccno
Pou5f1
Nudt1
Trim62
Pmaip1
E030030I06Rik
Raet1e
Raet1a
Nwd1
Tmco4
Rnf186
Flywch1
Ptpra
Abl1
Olfr1339
Tmed7
Eif1a
Acpp
Acp5
Zfp36
Plekhg2
Septin1
Tbc1d10b
Mylpf
2610528J11Rik
Mterf1b
Syne1
Zfp9
H2-DMa
Brd2
Anxa4
Frmpd1
Zfp600
Asah2
Otop1
Amotl2
Dhx32
Cyp51
Ddx20
Rpp14
Htd2
Clec2h
Pdcd2
Tagln3
Kif13b
Zfp710
Elobl
Coil
Cstf1
Aurka
Smarcd1
Sfxn2
Arl3
Fstl1
Dop1b
Terf2
Ccdc60
Golm2
Chd1
Trip12
Fbxo36
Arl2
Sema6a
Soga3
Pnrc1
Zfp979
Shoc2
Bbip1
G2e3
Trim33
Faim
Klf5
Pxdc1
Tmem59l
Crlf1
Lrrc8d
Mios
Gata4
Elovl5
Mmp9
Enah
Hook2
Junb
Abl2
Faiml
Cep70
Polg2
Ddx5
Cep95
Ankrd36
Kif17
Mterf1a
Crb2
Uqcr11
Mbd3
Setd5
Ndrg1
Tent5c
Mcf2l
Pvr
Cds1
Coa7
Zdhhc20
Pramel13
Olfr1034
Snx6
Rapgef1
Notch2
Il17d
Lhx5
Rnf8
Trh
Llgl2
Teddm1a
Glul
Mreg
Sp5
Dynll2
Marcks
Mapre2
Gdpgp1
Cib1
Zdhhc6
Vti1a
Sptb
Plcxd1
Gtpbp6
R3hdm2
Inhbc
Vps28
Slc39a4
Cpsf1
Lrrn4
Nkiras2
Dnajc7
B3gnt7
Ms4a10
Il17rd
Arap2
H3c3
H2bc3
H1f2
Slc26a8
Mapk14
Nbea
Ncdn
AU040320
Tmem131l
Galnt15
Ednrb
Agfg1
Phlpp2
Pald1
Ttc21b
Sh3rf1
Ubr1
Tmem62
Mpig6b
Ly6g6c
Ddah2
Clic1
Pik3ip1
Smad4
Trappc5
Mcemp1
Fcor
Prelid3a
Setd1b
Rhof
Arhgap32
Glrx2
Snn
Irgm2
Usp36
Asap2
Gpr162
Pum1
T2
Lzts2
Twnk
Mrpl43
Ksr2
Zfp423
Nsrp1
Glod5
Hnrnpa2b1
Cbx3
H3f3a
Fbxl7
Cerkl
Zfp978
Pou2f1
Dctn3
Arid3c
Sigmar1
Usp37
Cnot9
Cdkn2aip
Zfand6
Lifr
Chrac1
Esrrg
Coro2a
Sox1
Atxn3
Scd1
Spty2d1
Rps6ka3
Ralb
Mzt1
Bora
Trim25
Gpsm2
Qpct
Hcfc2
Glt8d2
Wdr59
Mapk4
Ephx2
Ccdc30
Zmynd12
Ppcs
Mpped2
Ect2l
Pdia3
Catsper2
Hoxa2
Ncs1
Tnni3
Dnaaf3
Pelp1
Mtcl1
Tmem63b
Mrpl14
Spry2
Epb41l1
Tfeb
Ifitm7
Tgfbr1
Phc2
Zbtb22
Tapbp
Rgl2
Fgd1
Ghrh
Erdr1
Rmi1
Hnrnpk
Bptf
Gngt2
Abi3
Dpp10
Slco5a1
Parp6
Ptch2
C1ql1
Actn1
Ino80
Pdpr
Plcd1
Mab21l1
Olfr813
Olfr812
Serpini1
Pdcd10
Rmnd5b
Deptor
Zfp991
Smarca1
Zfp341
Pxmp4
Prmt9
Radil
Zfp868
Ceacam13
Zfp62
Myo10
App
Cpsf4l
Csnk2a1
Usp13
Scrt2
Slc12a2
Hoxc13
Rps6ka1
Ppp3cb
Neil2
Serpinf2
Slc4a2
Cdk5
Abhd11
Tbl1xr1
Tmem121
Enpp3
H2bl1
Espn
Rbm45
Cyct
Sall4
Zbtb7b
Lenep
Exd2
Dync1i2
Usp32
2300009A05Rik
Gja1
Efemp1
Pou2f2
Ptprg
Fbxo11
Rtcb
Kazn
Slc19a3
Castor1
Tbc1d16
Ccdc40
Zmynd8
Ptk7
Smad7
Ropn1l
1700122O11Rik
Hif3a
Hoxb13
Epp13
Dmtn
Fgf17
Ubr5
Prkag1
Loxl3
Dok1
Tab1
Ttc9b
Prss30
Prkar1a
Aktip
Strn3
Ap4s1
Tcf7l2
Pde3a
Scamp2
Dgkd
Ptpn13
H2az2
Ppp2r5b
Gpha2
Atg2a
Galnt16
Rnf125
Brox
Aida
Rheb
Rab4a
Hsd11b2
Zfp532
Pdxdc1
Mpv17l
Padi6
Znhit2
Tm7sf2
Mrpl49
Fau
Naa16
Mtrf1
Col5a1
Mthfd2l
Prkab1
Ackr3
Zbtb25
Zbtb1
Slc9a3
Rasgrp2
Rnf213
Ptdss2
Rrp36
Mea1
Klhdc3
Garre1
Cdkl2
Cpt1a
Tmem42
Cdkn2c
Pms1
Ormdl1
Rab13
Jtb
Ncoa1
Kcnj4
Klhl1
Cacng2
Gdap1l1
4930474N05Rik
Msh6
Ccer2
Klhdc8b
Ccdc71
Mybph
Chil1
Dnmt3a
Spint1
Ppp1r14d
Snx16
Arhgap42
Itpkc
Coq8b
Mib2
Pik3r3
Mbp
Trim72
Cox5a
Eps8
Gas2
Fancf
Ano10
Camk1d
Tfpi
Slc16a9
Col13a1
Cfap300
Fam107a
Sp1
Hipk4
Rtkn
Fam50b
Gbx2
Tsga10
Lipt1
Timm44
Ppat
Paics
6820408C15Rik
Zcchc3
Rif1
Coa4
Prrc2b
Hsdl1
Dnaaf1
Uggt1
Flrt2
Zfp64
Dennd1a
Kcnn2
Pdp2
Picalm
Chid1
Prickle1
Ss18l2
Sec22c
Wdr61
Zfhx3
Nat8f6
Nat8f5
Cyp27a1
Hdac1
Pten
BC048679
Ap3b2
Vdac3
Lhpp
Bcl7b
Usp10
Liph
Glra1
Zfp976
Skil
Mtfr1l
Fam241b
Ptch1
Rps6ka2
Pamr1
Mturn
4930402H24Rik
Cd47
Tle4
Smim5
Smim6
Shc1
Flad1
Cks1b
Emb
Zdhhc2
Tmeff1
Kif5c
Fads1
Rassf7
Phrf1
Lmntd2
Lin9
Dlx6
Cdh1
Set
Srd5a3
Neil1
Dner
Cryzl2
Fis1
BC034090
Med12l
Ptpdc1
Kctd6
Capg
Obsl1
Inha
Stk32a
Kcnq3
Fam160b2
Zfp267
Fam227b
Dtwd1
Rtn4rl1
Dph1
Chn1
Tpd52
Vgll3
Jund
Iqcn
Xpo6
Ccdc194
Akt2
Cdhr1
LTO1
Tdrd3
Gsx1
Proser2
Mapk8
Tor4a
Aff3
Tmc7
Casc3
Msc
Duxbl3
Duxbl2
Duxbl1
Pla2g7
Mok
Zfp839
Zfp513
Snx17
Eif2b4
Foxd2
Pcgf5
H4c14
H3c13
H2bc18
Kcnj6
Tanc1
Trmt1
Nacc1
Gmnc
Pcbp2
Zbtb12
Ehmt2
Slc35f2
Mmp15
Oplah
Fgf6
Slc44a4
Ddx60
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Gimap3
Krba1
Tle6
Tcirg1
Ndufs8
Rragc
Trim68
Smim1
Sdc4
Mllt6
Csk
Ust
Gm7932
Rgs12
Slc44a3
P3h1
AU022252
Nphp3
Cltb
Stat5b
Stat5a
Sox7
Eomes
Hipk2
Nr2f6
Ushbp1
Socs5
Phc1
Vmn1r1
Dctn4
Pcdh8
Vrk1
Ggps1
Arid4b
Ssh1
Ttll1
Car14
Mapk3
Gdpd3
Cd24a
Tubb5
Mdc1
Togaram1
Klhl28
Adam22
Cfhr3
Lrrc8b
Brinp1
Stx3
Scd2
Secisbp2l
Msx1
Fbrsl1
Mink1
Slc24a5
Alg13
Cyth2
Meaf6
Snrpg
Fam136a
Tmem121b
Tctex1d4
Plk3
Btbd19
Tfap2c
Zyg11a
Cluh
Nmrk2
Dapk3
Malt1
Pef1
Pygo2
Pbxip1
Eif4e
Tmprss12
Anks6
Pik3r4
Mrpl58
D5Ertd579e
Trip10
Gpr108
A330070K13Rik
Hcn1
Arhgap24
Macroh2a1
Phyhipl
Apoe
Apoc1
Adamts20
Ccdc177
AI661453
1700001C19Rik
Foxj2
Ccn2
Fam178b
Cox5b
Snx9
Napepld
Appl2
Jak2
Ginm1
Prrg4
Krt42
Krt17
Rragd
Rock2
Ctxn2
Rab37
Rnaset2b
Rnaset2a
Mt1
Mt2
Ttc14
Hmga1b
Hmga1
AI413582
Kcnh8
Fahd2a
Percc1
BC003965
Unkl
Mthfd2
Mob1a
Kat7
C2cd2
Pdha1
Kctd9
Cdca2
Ptpn14
Pgrmc2
Faap20
Icam1
Spg20
Sirt7
Mafg
Nup85
Dcaf11
Tor3a
Dab1
Tec
Pik3cd
Mup6
Immp2l
Galk1
Tada1
Bcl10
Pkm
Epn3
Tbc1d9
Nutm2
Dgkh
Smarcd3
Smim8
Ankle2
Slc25a22
Rplp2
Pidd1
Cend1
Clcn4
Parp8
Ost4
Emilin1
Zfp292
Cga
Mxra8
Dvl1
Slc30a9
H3c15
H3c14
H2ac19
H2ac18
Ncor2
Umad1
Rpa3
Nid2
Tfg
Igf2bp3
Cuedc1
Hmgxb4
Zfp981
B4galt1
Fnta
Slc37a1
Mnx1
Pnkd
Gpbar1
Aamp
B3gnt4
Cand2
Ltb4r2
Ltb4r1
Cideb
Sfn
Spdef
Irx2
Ppp2r3a
Zfp36l1
Fn1
Per3
Jakmip1
Chst15
Retreg1
Cct2
Hivep2
Slc46a3
Psd3
Zfp91
Lpxn
Rbm17
B4galt2
Atp6v0b
Dph2
Ypel1
Olfr539
Cnn3
Ccdc3
Phf20
Pfdn6
Cacng7
Hectd1
Tdgf1
Lrrc2
Rps10
Rps21
Nadk2
Reep4
Hr
Sec22b
Slc38a2
Sdc3
Btbd3
Stc2
Klhl34
Suz12
Ralgds
Ift140
Cramp1l
Aff4
Rsph4a
Utp14b
Acsl3
Tmem161a
Chrna9
Fdxacb1
Alg9
1110032A03Rik
Rab33b
Pml
Atg5
Olfr1028
Nuak2
Klhdc8a
Ddx3x
Zfp977
Sbk3
Sbk2
Arf2
Ppara
Nsf
Nkx2-5
Bahd1
Prol1
Glis2
Speer4f1
Csrp2
Poc1b
Galnt4
Asap1
Stx11
Ctdsp2
Prmt8
Fzd7
Ap2m1
Ndufa4l2
Stac3
Slc22a23
Skor1
Slc40a1
Igsf9b
Zkscan5
Zkscan14
Btbd1
Ntng1
Slc27a2
Tex12
Il18
Bco2
Slc4a5
Adam12
Ltbp4
Fgfr2
Cldn14
Iqcc
Dcdc2b
Ccdc28b
P2ry1
Erc1
Lamp1
Rufy3
Rev3l
Camk2n1
Mical1
Galnt12
Scaf11
Bcat2
Hsd17b14
Pdk1
Trim36
Sema4d
Slc13a2