ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Zic3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◣ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Cd38
Gatad2a
Ufsp1
Letmd1
Znrf1
Pabpc1
Atrn
Smc6
Gen1
Eno1
Gid4
Asxl1
Prdm4
Mphosph8
Man2a2
Spata24
Zcrb1
Pphln1
Slc6a16
Arfgef1
Ywhae
Vezt
Fgd6
Zfp964
Wsb2
Trabd
Donson
Apbb2
Lama1
Colec12
Tbc1d5
Qpct
Rnf125
Grb2
Sbk1
Fbxo5
Apc
Exoc6b
Sfxn2
Arl3
Enpp4
Chd1
Rbm47
Cerkl
Wdr59
Ubr5
Pitx3
Slc12a4
Pacsin2
Faim
Notch2
Ints9
Hmbox1
Mkx
Ptprz1
Oga
Myo10
Car14
Slc16a9
Itm2b
Ndrg1
Arap2
Mreg
Ptpra
Slc37a3
Tagln3
Serpini1
Pdcd10
Ccdc30
Coq2
Marchf7
Mllt10
Cep70
Tmco4
Irgm1
Mbd3
Polg2
Mpped2
Ddx20
Ncdn
AU040320
Zfp9
Tbc1d9
Adgra2
Tmem62
H1f2
Glul
Ubtf
Terf2
Tmed7
Eif1a
Nkiras2
Mios
Rheb
E030030I06Rik
Flywch1
Prkag1
Cul5
Wipi2
Tmem131l
Ptch2
Adnp2
Kif17
Ddah2
Pdcd2
B3gnt7
Rif1
Pou2f1
Pde3a
Pou5f1
Asap2
Chrac1
Mapk14
Sh3rf1
Arid3c
Ppp2ca
Atxn3
Trim72
Zdhhc6
Vti1a
Pcif1
Slc12a2
Pxdc1
Rpp14
Htd2
Hcfc2
Dynll2
Plcxd1
Cuedc1
Arl2
Nudt1
Cdhr1
H3f3a
Fbxl7
Dhx32
G2e3
Sptb
Prelid3a
Lrrn2
Tprn
Golm2
Pvr
Mylpf
Rtcb
App
Agfg1
Nphp3
Kdm2b
Cep112
Tulp4
Tbc1d10b
Smad7
Coro2a
Gjc1
R3hdm2
Arhgap32
Tmc7
Abl2
Trim7
Zbtb25
Zbtb1
Tfeb
Stmn1
Ccn2
Slc35f2
Ppp2r5b
Klf5
Frzb
Mapk4
Lhx1
Sema6a
Slco5a1
Fam107a
Pdp2
Chid1
Shoc2
Bbip1
Slc15a1
Tsga10
Slc13a2
Tanc1
Pik3r3
Zfp36
Tgfbr1
Zfp64
Coil
H2az2
Mterf1b
Ralb
Ncoa1
Hnrnpa2b1
Cbx3
Garre1
Syne1
Usp13
AU022252
Stx11
Mllt1
Cacng2
Arhgap42
C1ql1
Fnta
Mterf1a
Neurog3
Fam227b
Dtwd1
Tada1
Zfp868
Snn
Kif5c
Mmp25
Shroom3
Med12l
D3Ertd751e
Gm10318
Fahd2a
Ccdc60
Tfpi
D5Ertd579e
Pnrc1
Slc39a4
Mapre2
Lrrc8d
Mib2
Casc3
Klhl1
Rab4a
Dcaf11
Pdia3
Catsper2
Ryr2
Trim36
Hif3a
Exd2
Msc
Tmem63b
Mrpl14
Ifitm1
Cdkl2
Slc14a1
Rtkn
Rassf8
Zfp976
Fcor
Cdkn2aip
Ssh1
Nacc1
Usp37
Cnot9
Snx17
Eif2b4
Rmi1
Hnrnpk
Gm9736
Stk32a
Snrnp70
Grid2ip
T2
Wdr61
Lifr
Slc25a22
Phf10
Cpsf4l
Parp6
Mllt6
Cd47
Ppp2r3a
Rnf8
Gsx1
Hdac1
Crocc
Lsm14b
Rgs12
Slc9a3
Smad4
Scd1
Loxl3
Dok1
Hipk2
Usp10
Set
Vrtn
Gdpgp1
Cib1
Prnp
Prn
Ypel1
H2-DMa
Brd2
Mt1
Zdhhc2
Gm19668
Kcnj4
Fstl1
Inafm2
Bcl10
Chst15
Phlpp2
Msh6
Dennd1a
Tapbp
B3gnt2
Gm3285
Zfand6
Ube2d1
Coq8b
Hsdl1
Dnaaf1
Tmeff1
Gne
Cds1
Lefty1
Zfp62
Fam118a
Umad1
Rpa3
Trip12
Fbxo36
Smarca1
Unc5b
Rest
Pik3cd
Lrrn4
Tdrd3
Tor4a
Mthfd2l
Timm44
Asap1
Zfp341
Trim25
Ost4
Tab1
Meaf6
Ust
Gpsm2
Slc9a3r1
Prkar1a
Togaram1
Klhl28
Actn1
B3gnt4
Spag4
Pgrmc2
Pelp1
Pdrg1
Lrrc8b
Ap1g2
Col13a1
Akip1
Usp36
Cst3
Klhdc8b
Ccdc71
Spg20
Prmt9
Mrpl49
Fau
Zhx1
Dmtn
Mturn
Castor1
Ttc21b
Enah
Tmem117
Trp53bp1
Tle4
Scrt2
Hmga1b
Hmga1
P3h1
Glra1
Mov10
Sbk2
Mafg
Phc2
Alg13
Mamstr
Prrc2b
Gngt2
Abi3
Tmem42
Srd5a3
Pygo2
Ppp1r36
Zyg11a
Nefh
Ap1b1
Obsl1
Inha
Ptch1
Naa16
Cfap300
Prex1
Phldb1
Ttc28
Mapk8
Mapk3
AI413582
Spred1
Syde2
Foxf1
Mtap
Abca8b
Pdpr
Ndrg4
Ptk7
Pald1
B4galt2
Cd24a
Tle6
Smarce1
Atg5
Ift140
Cramp1l
Foxp1
Fam136a
Mnx1
Sec22b
Cep63
Anapc13
Unkl
Spint1
Adam22
Pum1
2300009A05Rik
Ptpdc1
Ropn1l
Napepld
Kcnn2
Cd55
Plcb4
Abi2
Rnf220
Slc4a2
Rasgef1a
Oplah
Stk38
Il17rd
Aktip
Klf6
C2cd2
Cep55
Vrk1
Kank2
Nid2
Mmp15
Mrps15
Tvp23a
Timm9
2700049A03Rik
Dnttip2
Cd63
Apoe
Parp12
Gab1
Bcl7b
Bag3
Prickle1
Vdac3
Suz12
Rasgrp2
Kcnc2
Akt2
Ptpn14
Nup85
Clip4
Skil
Hmgxb4
Trim68
Mpc1
Gja4
Ttc9b
Utp14b
Acsl3
Spink2
Col27a1
Rbm24
Prom1
Mtfr1l
Sec22c
Gm9508
Baz1b
Slc17a5
Fn1
Pdxdc1
Mpv17l
Picalm
Sulf1
Syne2
Trmt1
Fgfr2
2210016F16Rik
Hivep2
Adamts7
Gab2
Gm3233
Tent5c
Efemp1
Tafa3
Ednrb
Nfix
Foxd2
Tpd52
H3c13
H2bc18
Tfg
Tbl1xr1
Neil1
Chn1
Plaat3
Immp2l
Setdb2
Nsrp1
Gm45935
Cab39l
Got2
4930402H24Rik
Tsc22d3
Has3
Dhrs7b
Fbrsl1
Poll
Dpcd
Tmem161a
Rybp
Pcbp2
Recql4
Lrrc14
Dctn4
Rbpjl
Fads1
Proser2
Atp11b
Per3
Camkk1
Kcnq3
Hinfp
Lpgat1
Reep2
Slc30a10
Steap3
Coa4
Cox5a
Smad6
Rcsd1
Gabrb3
Slco4c1
Cmas
Slc31a1
Fkbp15
Ccdc9
2510009E07Rik
Slc66a2
Rbm45
Lgmn
Pdha1
Tcirg1
Ptdss1
Mterf3
Nbea
Ppp1ccb
Ppp1cc
Cand2
Jade3
Krtap10-4
Tmem229a
Hectd1
Rprd2
Scaf11
Kctd9
Cdca2
Tef
Stc2
Numa1
Mad2l2
Plin3
Zfp687
Slc46a3
Csnk2a1
Camk1d
Zfat
Phyhipl
Nadk2
Dyrk4
Klhl34
Ctif
Appl2
Yod1
Ptdss2
Pms1
Ormdl1
Acot11
Col26a1
Snx15
Phf20
Fam241b
Dgkd
Bcl7c
Trip10
Slc30a9
Fbxl15
Ppat
Paics
Gtf3c4
Ddx31
Csrp2
Rrbp1
1700008O03Rik
Cluh
Wnt11
Gm19402
Fndc3b
Trmt61a
Mnt
Dnajc10
Trim33
Ksr2
Chrna9
Tusc1
Srpr
Foxred1
Cdk6
Etv6
Mkrn2
Smim1
H3c15
H3c14
Slc9a9
Mettl14
Rab37
Tbx1
Klhl13
Gna13
Dsn1
Maz
Hmgb3
Tmem121b
Nmnat3
Gm2696
Gadd45g
Tdh
Hr
Socs5
Socs2
Alg9
Pdpk1
C1ql3
Utp15
Ankra2
Rnf122
Krtap10-10
Tmem104
Nat9
Nlgn2
Slc25a24
Hspb1
Zscan10
Cenpb
Kcng3
Slc25a1
Tiparp
Clasp1
Fam169b
Caprin1
Ppp1r14a
Hnrnpr
Tlr2
Mob4
Dpf3
Frg2f1
Foxj3
Mrc1
Wbp4
Elf1
Tpm1
Zfp319
Usb1
Dmap1
Ndufa6
Sugt1
Ninj1
Prmt8
Ppp3cb
Actr10
Atp1b2
Draxin
Lama5
Cds2
Fgfrl1
Fut4
Myo1e
Nectin2
Cnot2
Fam171a1
Ccpg1os
Ccpg1
Dusp10
Bcap31
Abcd1
1700056E22Rik
P2ry1
Map3k20
Sf3a1
Ccdc157
Cfap20dc
Tmcc1
Slc22a23
Ntng1
Erc1
Col5a1
Uhrf1bp1
Spast
Dennd2c
Caps2
Pm20d2
Fyn
Mgat1
Chd7
Fam90a1b
Apoo
Pdgfra
Avl9
Chrm4
Exosc6
2700081O15Rik
Rell1
Ube3c
Usp32
Retreg1
Rnf103
Mfap3l
Trim8
Cltc
Eif4e
Trerf1
Pcgf1
Ggps1
Arid4b
Galnt16
Brwd1
Ppara
Unk
Uhrf2
Fut10
Nyap1
Stx8
Slain2
Cfap52
Plekhh1
Cxcl11
Nadsyn1
Dhcr7
Dvl1
Abr
Itga9
Tha1
Lpar2
Zbtb12
Racgap1
Zeb2
Tmem170b
Arhgap19
Zkscan5
Afap1l2
Cdk19
Gcnt4
Iqgap2
Pld6
Mob1a
Sdc4
Adamts18
Adnp
Xpo6
Zfp286
Ipo8
Iars2
Clcn4
Clasp2
Pkm
P3h2
Tmtc4
Cdc16
Bloc1s5
Atp9a
Rrm2
Ap3b2
Usp48
Clk1
Wipf1
Ahdc1
Cand1
Crh
Malt1
Camk2n1
Sbno2
Ido1
Inf2
Amd2
Amd1
Ptpn3
Hhip
Hes3
Hapln4
Cfl1
Epm2a
Dab1
Zscan30
Msra
Mindy2
Susd2
Pcmt1
Lats1
Btf3l4
Pdzd2
Hs3st5
Epn3
Poc1b
BC107364
Plekha7
Dse
Fam102a
Cacng7
Cachd1
Cnn3
Epb41l4a
Adam12
Tor1b
Ddx3x
Jak2
Fam107b
Mink1
Lamb1
C77080
Setx
BC031181
Mn1
Trmt9b
Myadml2
Rnf216
Phactr2
Atp6v1c2
Tob1
Nfe2l2
Xbp1
Pyurf
AB010352
Upp2
Fbp1
Kcnab3
Midn
Fam161a
Stk32b
Vsx1
Impdh2
Hey1
Zfp787
Vgll3
Hcn1
Igf2bp3
Snap29
Pi4ka
Rhbdl3
Slc27a2
Phax
Aldh7a1
Fcho2
Adamts20
Triobp
Spry4
Ugp2
Utp23
Mettl9
Tmem119
Smyd2
Mpzl1
Sco2
Hmx3
Cbll1
Sh3gl3
Hoxd3
Gpbp1
Ripply1
Klf1
Pdp1
Jpt1
Rbms1
Chrd
Lingo1
Dab2ip
Krba1
Wbp11
Ccdc6
Pnkd
Pdik1l
Htr1d
Hs3st3a1
Ppm1n
Dner
Slc35g2
Mycl
Nrros
Lypd6b
Fubp3
Zyg11b
Hoxc13
Raph1
Axl
Mapkapk2
Wnt16
Slc22a17
Ap1g1
Tmem178
Ubtd1
Mms19
Dus2
Ddx28
Nt5c3
Coch
Cux2
Iqch
Aagab
Sap18b
Sap18
Hsp90ab1
Kcna2
Fbxo25
Txlng
Ccdc194
Pex11g
Rhbdf1
Prune1
Grap2
Mylip
Wiz
Trmt1l
Swt1
Kmt2c
Afg1l
Fam20b
G0s2
Klhl22
Rnaseh2b
Plekhg5
St6galnac2
Ghitm
Fignl1
Ago3
Zfp839
Zfp217
Klf4
Actl6b
Kctd12
Fitm2
Podn
Hip1
Cped1
Gabpb2
Pcdhgb6
Pcbp1
Ginm1
Trim66
Top3b
Elmod1
Aff4
Pus3
Ddx25
Tmem198
Chpf
BC049715
Herc6
Tmem189
Tdp2
Acot13
Tubb5
Fbxl19
Tmem200c
Tcf7l2
Speg
Rgl2
Ddb2
Rock2
Galk1
Mob1b
Cecr2
Skor1
Gse1
Rab11fip1
Gmeb2
Barx2
Ccdc66
Irx2
Sowahc
Septin10
Sh3bp2
Atp2b1
Prrc1
Gm9639
Fgf4
Il17d