ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028798 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◣ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Rtn3
Gnai2
Inip
Flcn
Uqcrh
Lrrc41
Pip5k1c
Fam53c
Cln8
Gipc1
Aldh4a1
T2
Eed
Arntl
Cmc2
Cenpn
Phrf1
Cdk12
Nphp4
Kcnab2
Uchl3
Rita1
Ddx54
Ptcd3
Polr1a
Ptov1
Cenpe
Eif3b
Tcp11l2
Lrpprc
Nmral1
Med30
Rpl19
Ephb2
Calm3
Taf15
Septin11
Madd
Wdr77
Atp5pb
Get3
Denr
Cnot6
Cwc27
Mrps11
Mrpl46
Tardbp
Por
Cdiptos
Cdipt
Arid4a
Samd4b
Gmfg
Robo1
Cd3eap
Tbck
Aimp1
Rab28
Mlst8
Tst
Mpst
BC005537
Top2a
C1d
Miga2
Bzw2
Ankmy2
Nr6a1
Tada3
Arpc4
Lsg1
Prkdc
Mcm4
Rpl22
Hyal2
Gnb2
Myh14
Dgat2
Eif2ak3
Sash1
Pfdn4
Ift27
Arrdc4
Prkci
Ttll7
Slbp
Cdca7l
Galnt10
Ott
Gm15107
Gm15085
Mia2
Pkia
Tigd5
Eef1d
Tbc1d17
Akt1s1
Asah1
Qrich1
Limch1
Fam227a
Cby1
Smc3
Zfp821
Tmem260
Uros
Bccip
Camta1
Utp18
Mbtd1
Zfp27
Ndufb1
Cpsf2
Psip1
Rnasek
Zfp687
Ankrd13a
Git2
Fus
Cnot11
Paxip1
Atg12
Ap3s1
Dpp9
Cdt1
Wasf1
Cdc40
Sharpin
Maf1
Abhd2
Rhbdd3
Ewsr1
Mblac1
Srpk2
Fsbp
Ankrd54
Ptcd2
Mrps27
Frat2
Tmem198b
Dnajc14
Nol6
Pabpc4
Uchl1
Cct5
Atpsckmt
Ppt2
Frat1
Hap1
Oxr1
Fgd4
Selenow
Zswim4
Psma8
Mat2a
Slc36a4
Dohh
Mbnl2
Rmnd5a
Atg101
Noct
Atrnl1
Pknox1
Gripap1
Iqch
Aagab
Atp8a1
Pik3r3
Mgrn1
Raly
Tspan4
Polr2l
Jun
Rlim
Pias2
Pafah1b3
Them6
Ces2a
Ilf2
Uqcrq
Tcerg1
Smg8
Tll1
Cnot1
Hexim1
Fanci
Tnrc6b
Dut
Dedd2
Hdac2
Oxgr1
Prdm10
Dnmt1
Uba1
Lrch4
Bzw1
Paip2b
Map3k7
Ptdss1
Mterf3
Rel
Atp5b
Map7d1
Cfap77
Mis12
Derl2
Inava
Spsb3
Nubp2
Gpr108
Nectin3
Siah3
Stip1
Ube2c
Ltbp4
Kctd2
Atp5h
Cd164
Mtch2
Cdca8
9930104L06Rik
Hnrnpc
Cdc25c
Polr2a
Sp2
Dnm2
Rbbp9
Zfp94
Traf2
Tepsin
Ndufaf8
Eif4a3
Ppm1l
Abhd16a
Rbm39
Papln
Brd2
Cenpp
Wasl
Xrcc1
Pinlyp
Myl12a
Sspn
Smim4
Trp53
Wrap53
Nasp
Sdcbp
Actrt3
Timeless
Ccp110
Fchsd2
Tpbg
Sp1
Fos
Flad1
Rnf5
Col9a1
Rfx1
Fbln2
Mfsd13b
Cdr2
Mtmr14
Srxn1
Ttll10
Rhobtb3
Sgsm3
Zpbp
Krtap6-1
Cic
Akirin1
Katnb1
Cwc22
Paf1
Med29
Zfp869
Scamp5
Zfp580
Hcn1
Rab11b
Krcc1
Fxyd3
Fbxo33
Prkaca
Rusc2
Slc39a3
Ska2
Prr11
Atp6v0c
Ensa
Psmd5
Sel1l
Ccdc85c
Alox5ap
Sod2
Dmxl1
Fbxl14
Dbp
Nudt2
Kif24
Tacc1
Rps19
Frem3
Srgap2
Fam72a
Spdl1
H2-T9
H2-T22
Gm6034
Mvk
Mmab
Lsm6
Zfp219
Nlk
Khsrp
Rps7
Tmem94
Anp32e
Pramel51
Rnf26
Mtf2
Dot1l
Nfatc2ip
Timm17b
Pqbp1
Ugp2
Atg16l2
Cspp1
Cops5
Smarcal1
Kctd9
Cdca2
Nfe2
Plekhf2
Usp1
Fam76a
Prickle1
Ccnj
Ss18
Per2
Rbm15
Dgcr6
Golph3l
Relch
Pign
Slc25a20
Cul2
Rap2a
Rnpc3
Slit3
Pnpo
Abtb2
Wbp1
Wdr62
Plod2
Akt2
Zfp608
Mtss2
Tom1
Kmt5c
Hbp1
Slc25a25
Brat1
Ndrg2
Tmem218
Wasf2
Slc66a2
Dlst
Tcf12
Dusp12
Mrps10
Krt19
Nudcd2
Hmmr
Ift140
Cramp1l
Tctn2
Prdx2
Zfand3
Maco1
Kdm4a
Fuz
A930018P22Rik
Hnrnpr
Fzd2
Pip4k2b
Evi5l
Polg
Magel2
Ssrp1
Ezh2
Trim8
3110082I17Rik
Tcf19
Cchcr1
Ivd
Arap1
Ddx41
Nacc2
Immp1l
Elp4
Rpn2
Mroh8
Copz1
Tle3
Bsdc1
Cdc23
Dus1l
Ctps
Ap2m1
Stau2
Zfp607b
Ireb2
Znhit3
Psma2
Mrpl32
Map3k3
Snrpd3
Gucd1
Rspry1
Psme3ip1
Kmt2a
Ubald2
Zfp52
Hspa4
Mapk14
Dap3
Sgms1
Pxmp4
Zbtb3
Nckap5
Zfp599
Fam24b
Supt5
Prickle2
Dcc
G3bp1
Slc35e2
Hdac1
Elmo2
Tmx2
Med19
Tprn
Cep135
Tedc1
Lars
Isoc2b
Ngdn
Akap11
Zfp574
Ankhd1
Zdhhc5
Hint2
Erg
Lum
Hexim2
Ppp6r3
Chd6
Armc1
H2-DMb1
Wnt10b
Lyzl1
Folr2
Arf4
Rtkn
Sptlc2
Prmt1
Lyrm7
Shisa5
Ube2b
Nvl
Sarnp
Ormdl2
C330007P06Rik
Gm3667
Pmpcb
Rraga
Faap24
Lca5
Cemip
Kat6b
Tbcb
Polr2i
Ak1
Sorbs2
Phldb1
Pan2
Poc5
Wdr27
1600012H06Rik
Yipf2
Timm29
Siah1b
Ankfy1
Diaph1
Arl2
Rnf181
Osbp
Stat3
Ints4
Xab2
Pet100
Lratd1
Apc2
Rbm25
Cct8
Fdft1
Stt3a
Rcl1
Gpsm2
Cdc45
Heatr1
Gtpbp3
Trim45
Fdxr
Mxd4
Dcaf15
Trappc11
Rwdd4a
Mterf2
Psat1
Rbbp6
Atf7
Msantd4
Cd1d1
Ctla4
Wwox
Dapk3
Rpl27
Gtf2b
Got1
Tars
Ticrr
P4hb
Mon1b
Hip1
Tomm40
Gcdh
Timm10
Pum3
Glrx5
Srp68
Ric8b
Mfsd8
Rpp38
Traf7
Arhgap11a
Psmb3
Nmt1
Mospd3
Chgb
Npm1
Ppm1b
Zfp317
Arf2
Islr
Pin1
Ap2a1
Acaa1a
Zfyve21
Xrcc3
Chmp3
Fam76b
Cep57
Abhd18
Rab40c
Mest
Alyref2
Zbtb40
Jag2
Cenpu
Ndst2
Eapp
Bcl6
Cltc
Fam20b
Rps27l
Rps29
Sec14l1
Xpc
Lsm3
Pa2g4
Hjurp
A730008H23Rik
Proser1
Nhlrc3
Lrrc56
Hras
Rab5b
Tmem41b
Gm5165
Zfp143
Rab33b
Tjp2
Gtf2a1
H3c15
H3c14
Gm3448
Gm3417
Susd6
Phlda3
Pole3
4933430I17Rik
Trappc9
Ctnnb1
Nme1
Dnajc16
Get4
Ubr4
Slc35b1
Uvssa
Ccser2
Chmp7
Zxdc
Cbr3
Ints10
Slc30a5
Mrpl21
Ighmbp2
Htra2
Aup1
Frmd6
Nt5c3
9030025P20Rik
Bbs2
Fkbp3
Tcte3
Ermard
Styxl1
Mdh2
Mapkapk5
Taf9
Rad17
Ak6
Nuf2
Isy1
Tob1
Cfap20
Spty2d1
Birc2
Chordc1
Gatad2a
Tpt1
Wdfy2
Magi1
Get1
Mrpl30
Mitd1
1700016H13Rik
Tecpr1
Zscan25
Gm3435
Plekha1
Gramd1b
Tubb4b
Fam149b
Ecd
Ttc14
Txnip
Cnot3
Rbbp8
Oprd1
Faf1
Esyt2
Med6
Snrpc
Psmd3
Nabp1
Tfg
Palb2
Dctn5
H4c3
Opa1
Actr3
Rps12
Tsga10
Kpnb1
Usp20
BC005624
Dffb
Cep104
Calm1
Hes6
Gtf2f1
Zfp24
H3f3b
Aard
Tcf3
Dgat1
Ttc41
Hsp90b1
Cactin
Itgb4
Prpf40a
Arl6ip6
Ccnt2
Rps3a1
Rer1
Morn1
Crtc1
Srm
AW549877
Zcchc14
Eps15
Fitm2
Sigmar1
Egr2
Lamp1
Aig1
Zfp654
Cggbp1
Nup133
Spdye4b
Rbak
Gpn3
Fam216a
Wdr92
Pno1
Grb2
Vta1
Inka1
Evpl
Ist1
Lig4
Pop7
Utp3
Pip4p1
Kpna3
Sde2
Gale
Rgl2
Nfat5
Abcf2
Kansl3
Arhgef4
Stk32c
Supv3l1
Cipc
Ltbp1
Glce
Bod1l
Mef2a
Gpatch8
Rpl3
Ube2d3
Ttll5
Erg28
Eif4e
Hnrnpa2b1
Cbx3
Kifap3
Fam3c
Mob1a
Rnf7
Mettl25
Ccdc59
Mideas
Colgalt1
Rbbp5
Npc2
Mdm2
Isca2
Cep63
Anapc13
Hr
Mmp15
Kdsr
Sacm1l
Slc33a1
Spc25
Haspin
Adnp
Abhd13
Fam227b
Dtwd1
Usp12
Zc3h18
Cfap298
Dcp1a
Yars
S100pbp
Pias4
Zfpl1
Cdca5
Tex14
Man1b1
Rab6a
Ep400
Banp
Fra10ac1
Arl15
Birc5
Sfi1
Pex3
Adat2
Ap1g1
Rps6ka5
Nup54
Med23
Cebpa
Rwdd1
Aph1b
Med17
Lsr
Fam187b
Cyth1
Mknk2
Ube2j2
Txnl4b
Kansl2
Dhx38
Vps26c
Hspa5
2900026A02Rik
Kifc5b
Nomo1
Rab21
Naa35
Cpsf1
Kbtbd3
Jpt2
Spring1
Rnft2
Ss18l1
Psma7
Clptm1
Srd5a1
Nsun2
Mafa
Atf2
Smim14
Ube2f
Sh3gl1
Snrnp200
1810024B03Rik
Timm13
Ssbp2
Chchd2
Cbwd1
Saysd1
Dhx33
Tubg1
Retreg3
Pradc1
Cct7
Eif3f
Tex2
Tut7
Farsb
Rad23b
Tmed2
Poldip3
Gm3739
Calr
Vapa
Gm51425
Lancl2
Trib1
Psmb2
Ndufs7
Bcl9l
Smc6
Gen1
Fem1b
Usp53
Ubald1
Tram1
Myl12b
Cdk11b
Otud6b
Fam83b
Mindy2
Ppp2r5a
Mrpl1
Cacybp
Supt4a
Setd3
Commd1
Ccnk
Ddx20
Mrpl44
H2ac19
H2ac18
Gas1
Fubp1
Dnajb4
Hnrnpl
Stag1
Lsm14b
Chmp5
Ccdc126
Bag1
Epg5
Atg2a
Ggct
Ppwd1
Phf12
Cenpk
Atp5g1
Plag1
Chchd7
Btbd11
Herc2
Mfsd4b4
Eea1
Aff1
Nudt9
Oasl1
Clptm1l
Parp6
P4ha1
Ddost
Arid1a
Megf8
Polr3g
Mblac2
Ppp3cb
Mtres1
Ahctf1
Uspl1
Slc3a2
Myh10
Scamp1
Mtmr2
Galk2
Cops2
Brpf1
Krr1
Septin7
Mrps31
Meis1
Cnnm3
Xpnpep3
St13
Tmem19
Pxk
Rab5if
Wdr36
Agpat5
Ifnar1
Spa17
Siae
Dnajb1
Sphk2
Rpl18
Serpinb5
Dhx8
Slc25a32
Dcaf13
Yif1b
Thap12
Dab1
Csnk1g2
Cops8
Pdik1l
Ampd3
Nufip1
Gpalpp1
Slc39a13
Prcc
Fbxw7
Sun1
Pnn
Dynll1
Ss18l2
Gmfb
Wdr43
Srsf1
Oaz1
Nup50
Dnajb9
Eif1
Cyth2
Socs1
Ppp1cb
Taf4b
Stx16
Zfp513
Mtmr6
Zbtb5
Setx
Pdap1
Bud31
Mmaa
Rad51ap1
D6Wsu163e
Fer
Polr3f
Dzank1
Tsc22d1
Jund
Fam204a
Ctnna1
Smarcd2
Flywch1
Stxbp4
Cox11
Zfp668
Cilk1
Ddx18