ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX450830 | Epidermis
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◣ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Jag2
Lrrc56
Hras
Cbr3
Mia2
Akirin1
Inka1
Cnot6
Rps27l
Pip5k1c
Dlst
Pa2g4
Iqch
Aagab
Kctd2
Atp5h
Phlda3
Denr
Scn4b
1700016H13Rik
Evpl
Por
Dut
Kmt2a
Ndst2
Pmaip1
Tecpr1
Abhd16a
Ptcd2
Mrps27
Asah1
Arl2
Hes2
Fam20b
Zscan25
Wasl
Itgb4
Ankrd13a
Plekha1
Flcn
Srxn1
Met
Ptdss1
Mterf3
Prdm10
Ube2b
Rpn2
Mroh8
Rmnd5a
Atp6v0c
Map7d1
Sash1
Cmc2
Cenpn
Psip1
Noct
Cilk1
Fam83b
Tpt1
Arhgef4
Diaph1
Ss18
Cdt1
Eea1
Cdca7l
Ccdc85c
Fbxo33
Bcl6
Dot1l
Zfp277
Dock4
Gipc1
Cenpp
Zfp219
Raly
2900026A02Rik
Sod2
Polg
Per2
Slc30a5
Fam3c
Atrnl1
Myl12a
Fermt1
Madd
Polr3g
Mblac2
Yrdc
1110065P20Rik
Fbxl14
Myo6
Slbp
Tmem41b
Ireb2
Letm1
Gramd2
Agap1
Prdx2
Fzd6
Agpat5
C030006K11Rik
Fer
Tjp2
Ss18l1
Psma7
Dock11
Mtmr14
Cd47
Rnf14
Akt2
Myl12b
Mindy2
Rita1
Ddx54
Cd164
Dnmt1
Tacc1
Atg101
Dap3
Prr3
Gnl1
Vwa1
Phrf1
Ppm1l
Ube2a
Aff1
Aph1b
Ei24
Cul2
Col16a1
Nup50
Eif4a3
Akap11
Tspan4
Polr2l
Bzw1
Prpf40a
Arl6ip6
Calm3
Slc35e2
Adnp
Fam149b
Ecd
Tardbp
Rhbdd3
Ewsr1
Mmp15
Hsf1
Bop1
Crtc1
Taf15
Ndrg1
Sri
2610507B11Rik
Ttc14
Bcl9l
Rpl36al
Mgat2
Arhgef19
Ssrp1
Susd6
Ptov1
Set
Micall1
Pip4k2b
Ephb2
Serpinb5
Pkia
Spc25
Spsb3
Nubp2
Tigd5
Eef1d
Tcp11
Rlf
Rusc2
Lsr
Fam187b
Marchf7
Mrs2
Tmem260
Supt4a
Hdac2
Uhrf2
Syvn1
Pard6g
B230219D22Rik
Epm2a
Prkci
Mdm2
Carhsp1
Apol8
Pank1
Tmco1
Cep63
Anapc13
Vwa2
Mfsd4b4
Zcchc2
Cenpe
Dst
Cln8
Mtch2
Unk
Gnb2
Glce
Sigmar1
Hsd11b2
Tmem175
Gak
Ndufb1
Cpsf2
Birc2
Plxna3
Fkbp3
Pdik1l
Rab21
Gtf3a
Smc3
Sec24a
Nprl3
Slc25a42
Fus
Tipin
Zfp385a
Mark4
Acp5
Zcchc14
Fam160a2
Plekhg1
Zmynd8
Fosl2
Fam227a
Cby1
Map4k2
Pygo2
Btg3
Eif4a1
Dhrs3
Bzw2
Ankmy2
Chst15
Prepl
Camkmt
Mef2a
Map7
Tas1r1
Nol9
Banp
Zfand3
2810021J22Rik
Lrp1
Iqank1
Fam83h
Esrp2
Dsc3
Flnb
Plekhh3
Zzz3
Cd151
Pgs1
Prkdc
Mcm4
BC005537
Eid1
Krt15
Cwc22
Msmo1
Usp34
Xpc
Lsm3
Usp20
BC005624
Ppp3cb
Fam162a
Ccdc58
Popdc3
Brd3
Cspp1
Cops5
Ak4
Dop1a
Rgs12
Smarcd3
Usp2
Arrdc2
Ankrd11
Fosl1
Ano6
Tst
Mpst
Bod1l
Puf60
Rraga
Timm23
Parg
Pik3c2b
Ddr1
Rpl35
Bnc1
Pacs1
Paxip1
Vwa7
Mapk14
Gna15
Lsm14a
Dedd2
Perp
Saysd1
Fzd10
Ap5b1
Dgat2
Cdiptos
Cdipt
Tpbg
Mcts2
Tbca
Zbtb2
Coro2a
Dis3l
Parp6
Mysm1
Ptpn4
Galnt10
Slc39a9
Erh
Cstb
Jade2
Calhm2
Nptn
Septin11
Tmem19
Ezr
Srsf5
Micos10
Tmpo
Bcl2l11
Irf6
Selenow
Man2a2
Top1mt
Ptprj
Mob2
Ift27
Vopp1
Frat1
Nphp4
Kcnab2
Frat2
Prep
Frmd6
Nr3c1
Aldh4a1
Epb41
Nktr
Rap1gap
Rbbp6
Gne
Scamp5
Map2k6
Bbs2
Zfp692
Kpnb1
Edem1
Usp15
Slc35e1
Zdhhc1
Crebrf
Lamp1
Fam53c
Fra10ac1
Stxbp4
Cox11
Casp2
Ppm1d
Exo5
Golim4
Tspan3
Hmgcll1
Atf7
Pfdn4
Laptm4a
Tnks2
Bbc3
Fam241a
Imp3
Arf3
Lancl2
Eif3b
Fmnl3
Lims1
Hdac1
Cars2
Smarcc2
Satb2
Zmym3
Fanci
Rps3a1
Rnasek
Atl2
Fam53a
Drg1
Lrpprc
Awat2
Rab40c
Birc6
Uchl3
Ets1
Ccdc71
Tex264
Fxn
Cd3eap
Myo5a
Haspin
Zfp513
Tpst1
Abcg2
Pknox1
Rtn3
Nmral1
Ttll5
Erg28
Mob3a
Izumo4
Gabpb1
Mrpl40
Hira
Actr3b
H3c15
H3c14
Dkk3
P4ha1
Septin7
Inava
Vamp4
Fbxo34
Ahdc1
Taf9
Rad17
Ak6
Commd1
Pdia3
Catsper2
Cdkl3
Dazap2
Inka2
Etfa
Ostf1
Nmrk1
Zfyve21
Xrcc3
Tpp1
Rgl2
Uap1
Zranb1
Dennd4b
Mprip
Smyd4
Rpa1
Srp9
Ankrd26
Abhd18
Gan
Mcc
Lrp5
Suv39h1
Kdf1
Gm42323
Smg9
Wasf1
Cdc40
Pnn
Nyx
Atrip
Ndufb6
Rb1
Pak6
Efnb2
Mgrn1
Znfx1
Atg12
Ap3s1
Hmg20b
Meis1
Cfap77
Clasp2
Cldn34c1
Mat2a
Get4
Rapgefl1
Ttc32
Gpr19
Krt5
Epb41l1
Mlst8
Xpo1
Raver1
Micu2
Sf3a2
Plekhj1
Crem
Sec62
Zfp563
Gpi1
Tbc1d17
Akt1s1
Atg16l1
Celf1
Ppp1r14c
Fam117b
Tada3
Arpc4
Lrp11
Slc20a1
Ttk
Abcg1
Map3k7
Xxylt1
Anapc11
Alyref
Cltc
Elmod2
Recql4
Lrrc14
Ctnna1
Emd
Fdx1
Spata5l1
Rnf38
Cacnb2
Zbtb7a
Lama3
Pidd1
Ung
Them6
Slc15a4
Galt
Lsm1
Bag4
Dcaf4
Atg16l2
Rel
Cmtr1
Mrps7
Gga3
Proser1
Nhlrc3
Gbe1
Phldb2
Phka2
Scamp1
Gpr108
Sdhaf1
Gnas
Fbxw4
Dohh
Rpl19
Nt5c3
Ccnl1
Rnf7
Vgll4
Ralgps1
Slc2a6
Prrt2
Srm
Wdr45b
Mlec
Cep128
Mbtps1
Chuk
Lactb
Picalm
Zfp382
P2ry1
Phc2
Ccpg1os
Ccpg1
Got1
Matr3
Dicer1
Disp3
Gm10037
Nectin3
Rhobtb1
A930033H14Rik
Atp10a
Fabp5
Bcl2l1
Tada2b
Ccdc96
Wnt7b
Znrf1
Ykt6
Kif2a
Mfsd8
Socs5
Spint2
Nipal4
Nsmce4a
Isy1
Sik2
Aip
Tmem134
Srsf10
Tcf25
Wrap73
Cotl1
Cdk12
Hspa4
Rap2b
Dhrs13
Nrbp2
Prkag2
Stard4
Elavl1
Bahd1
Yod1
Abr
Fam104a
D11Wsu47e
Stau1
Cep170b
Fam204a
Wdr4
Ppfia3
Ptcd3
Polr1a
Vps26c
Adpgk
Fbxl15
Mrps15
Rpl10a
Zfp961
Cebpg
Mydgf
Tle6
Qrich1
Ttll7
Wdr5
Mon2
Ubac1
Herc2
Tmem198
Chpf
Cds1
Ube2d2a
Gpbp1
Ppib
Trim24
Alox12
Yars2
Zfp617
Tmem165
Slc34a1
Mapkapk5
Pradc1
Cct7
Stag1
Ahctf1
Map4
Rab14
Ccnj
Cul3
Zpbp2
Fam167a
Sun1
Atf3
Coq2
Elmo3
Ruvbl2
Gys1
Shisa5
Phc3
Tec
Prrc1
Ltb4r2
Tnk1
Uros
Bccip
Ypel5
Hp1bp3
Faf1
Ddhd2
Uggt1
Eri3
Pebp1
Zfp516
Lage3
Ppp2r5e
Urah
Gtf2a1
Nfyc
Rmi1
Hnrnpk
Tubgcp3
Vmac
Ndufa11
Cenpb
Zdhhc5
Hr
Ttbk2
Sfrp1
Tmem230
Fam219b
Tsga10
Sdk1
Chd8
Ppm1g
Ccdc71l
Rnase4
Ang
9530077C05Rik
Anln
Slc46a3
Zfp428
Lrrc20
Gid4
Cse1l
Dram1
Dnajc27
Plxna1
Mtf2
Ube2d3
Secisbp2
Clcn3
Mtdh
Ggt6
Arhgap39
Rab33b
Tubb4b
Rps19
Atg5
Edrf1
Ptges3
Casp14
Irf8
Suco
Zfp358
Ctnnb1
Tmem183a
Entpd7
Tmco4
Ldb1
Shld2
Glud1
Frg2f1
Foxj3
Coq9
Ciapin1
Usp42
Eed
Nfat5
Zbtb21
Mest
Snx21
Cmip
Wdr77
Atp5pb
Gmcl1
Nucks1
Rexo2
Cct5
Atpsckmt
Spdye4b
Rbak
Map3k5
Tpm1
Xylb
Ahcy
Prdm11
Brf1
Mblac1
Cfap20
Cnot3
Arhgap11a
Rrbp1
Celsr3
Npc2
Isca2
Smarcal1
Dnaja1
Phf20
Syn1
E2f7
Smpd2
Ppil6
Smdt1
Thap12
Osbpl9
Dennd2c
Lrrfip2
Dbp
Stk11
Mt1
Poldip3
Large1
Polr2a
Trp53
Tmem104
Nat9
Wrap53
Nup93
Atxn7l3
Higd1a
Mcph1
Phf12
Btg2
Cyp20a1
Il1rl2
Clptm1l
Dynll1
Prkcz
Txnl4a
Gm16286
Me2
Slc39a7
Rxrb
Rev3l
Bcar1
Sez6l2
Asphd1
Pik3r3
Birc5
Lpar3
Fbxl2
Ezh2
Pim3
Cdkn1a
Ncbp2
0610012G03Rik
Lbr
Zmym5
Stk38
Fam110a
Acvr1b
Dzip1
Samd4b
Gmfg
Sptan1
Upf3a
Det1
Dnajb3
Dcps
Ptp4a1
Sugp2
Armc6
Sf1
Ascl2
Flvcr1
Megf9
Ppp1r36
Uqcrh
Lrrc41
Srf
Lsg1
Serf2
Pafah1b3
Traf2
Mfap3l
Pbld2
Hnrnph3
Morc2a
Zfp784
Derl3
Nupl1
Adam10
Slc11a2
Cnnm3
Msh6
Aktip
Pkp3
Eef2
Ogdh
Spata33
Chmp1a
Gga1
Pdcd6ip
Prpf40b
Acer2
Lrrc8b
Fchsd2
Mtres1
Adrm1
Dnajb1
Arf6
Slc25a4
Taf11
Anks1
Far1
E2f1
P4hb
Dgcr8
Ifrd1
Cc2d1b
Sprtn
Exoc8
Ltbr
Pgp
Abcf2
Ttll12
Hyal1
Tmem245
Ccng2
Sdf4
B3galt6
Acap2
Rabggta
Slc35a5
Atg3
Etv5
AI661453
1700001C19Rik
Ssbp1
Pithd1
Zfp821
Agfg1
Ncoa5
Tut7
Adss
Snx13
Grb2
Ttc7
Wdfy2
Pabpc1
Schip1
Zbtb8os
Rbbp4
Rmnd5b
Naa40
1110008P14Rik
Nomo1
Ttc9c
Hnrnpul2
Anks3
4930451G09Rik
Pank2
Gtf2a2
Arf2
Wdr91
Cltb
T2
Rpl22
Arrdc4
Gnai2
Cenpu
Sspn
Arntl
Arid4a
Hyal2
Myh14
Eapp
Sp2
G3bp1
Flad1
Cwc27
Sharpin
Maf1
Robo1
Rps29
Oxr1
Ankrd54
Sec14l1
Ska2
Prr11
Rfx1
Abhd2
Hexim2
Fgd4
Rbm25
Paip2b
Hjurp
A730008H23Rik
Dpp9
Hnrnpc
Rab5b
Mtss2
Ap2m1
Eif2ak3
Zfp869
Tepsin
Ndufaf8
Osbp
Top2a
Gm5165
Zfp143
Cnot1
Atp5b
Sp1
Wwox
Tom1
Brd2
Tcp11l2
Tbck
Aimp1
Mvk
Mmab
Gm3448
Gm3417
Get3
Pole3