ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

T2
Phrf1
Mia2
Dnmt1
Ptcd2
Mrps27
Prkdc
Mcm4
Cd164
Ift27
Pip5k1c
Rita1
Ddx54
Sod2
Uchl1
Brd2
Fam53c
Rpl22
Asah1
Ankrd13a
Taf15
Tacc1
Bzw2
Ankmy2
Ccdc85c
Gipc1
Akirin1
Ptov1
Wasl
Fam227a
Cby1
Sash1
Dbp
Tom1
Ptcd3
Polr1a
Ap2m1
Cnot6
Nphp4
Kcnab2
Mrps11
Mrpl46
Eif3b
Oasl1
Paxip1
Brat1
Cdiptos
Cdipt
Cmc2
Cenpn
Tigd5
Eef1d
Prdm10
Dlst
Cenpe
Atg12
Ap3s1
Vangl2
Rpn2
Mroh8
Pknox1
Slc39a3
Rusc2
Aldh4a1
Gpr108
Calm3
Septin11
Sspn
Dut
Them6
Atp6v0c
Dot1l
Spata17
Gpatch2
Cln8
Madd
Por
Arntl
Sp2
Lyrm1
Dcun1d3
Rab5b
Dpp9
Pfdn4
Fchsd2
Flcn
Diaph1
Pafah1b3
Rab28
Cspp1
Cops5
F830045P16Rik
Iqch
Aagab
Galnt10
Akt2
Prkci
Myh14
Uros
Bccip
Slc35e2
Sharpin
Maf1
Eed
Raly
Timeless
Zfp24
Tepsin
Ndufaf8
Zfp27
Rbbp6
Rfx1
Pcdh9
Rpl19
Ak1
Atrnl1
Tcp11
Tmem267
Ptdss1
Mterf3
Rnasek
Uchl3
Fbxo33
Celsr3
Ppt2
Rbbp9
Dedd2
Dohh
Sri
Hdac2
Inava
Arrdc4
Atg101
Oxr1
Chmp3
Paip2b
Get3
Smarcal1
Dgat2
Fanci
Arid4a
Rps29
Ndufb1
Cpsf2
Mlst8
G3bp1
Gnb2
Cd3eap
Dnm2
Mblac1
Hyal2
Abhd2
Prmt1
Col9a1
Hap1
Cfap77
Sp1
Frat1
Hdac1
Mat2a
Srxn1
Slbp
Cnot1
Tsc22d1
Polg
Arl2
Tmem260
Nmral1
Traf2
Zfp748
Phldb1
Frat2
Abhd16a
Kctd2
Atp5h
Cwc27
Stx16
Fgd4
Wasf1
Cdc40
Uqcrq
Flad1
Tbc1d17
Akt1s1
Map7d1
Pkia
Atg16l2
2310039H08Rik
Atp8a1
Tpbg
Apela
Uqcrh
Lrrc41
Tada3
Arpc4
Ppm1l
Sigmar1
Ska2
Prr11
Vmn2r4
Mtmr14
Cenpp
Ndst2
Tardbp
Lrpprc
Bzw1
Hexim1
Fzd2
Ablim1
Fbh1
Ankrd16
Prkag2
Mrpl21
Ighmbp2
Smg8
Uba1
Utp18
Mbtd1
BC005537
Limch1
Tst
Mpst
Myl12a
Tcp11l2
Osbp
Dffb
Cep104
Syn1
Sox5
Pik3r3
Cnot3
Atp5b
Stt3a
Polr2a
Wasf2
Eif2ak3
Zdhhc5
Selenow
Elmo2
Ogfod1
Nudt21
Plekhf2
Rtkn
Psip1
Lsg1
Dcps
Nfatc2ip
Ttll7
Mgrn1
Frmd6
Chchd2
Ppp6r3
Cic
Top2a
Ankrd54
Adpgk
Mocs3
Dpm1
Tle3
Ube2b
Pip4k2b
Selenop
Cdt1
Proser1
Nhlrc3
Rara
Fus
Cct5
Atpsckmt
Ngdn
Rmnd5a
Zfp574
Rab34
Tnrc6b
Zfp691
Opa3
Noct
Ephb2
Cobll1
Slc4a2
Cul2
Rptor
Ncbp2
0610012G03Rik
Cyp2u1
Fkbp8
Rtkn2
Rhobtb3
Col9a3
Rab4b
Trp53
Wrap53
Rcc2
Prdx2
Myl12b
Robo1
Tmem198b
Dnajc14
Prickle1
Fdft1
Ndufs7
Ube2a
Arvcf
Chrm1
Tom1l2
Drc3
Atf7
Phldb2
Gpsm2
Ppdpf
Smc3
Camta1
Pabpn1
Stip1
Nudt2
Kif24
Bscl2
Gng3
Zfyve21
Xrcc3
Ss18
Hnrnpc
Lars
Glrx5
Ss18l1
Psma7
Fos
Nf2
Zmat2
Cldnd1
Plpp2
Rnf5
Zfp654
Cggbp1
Kif1b
Swsap1
Rab11b
Tnrc18
Zfp219
Ung
Magi1
Cdc25c
C1d
Tmem242
Crebrf
Ivd
Cdk2ap2
Npas4
Rhbdd3
Ewsr1
Lrch4
Bcl9
Mon1b
Dcaf7
Fuz
Zfp580
Slc25a25
Nlk
Evi5l
Akap8l
Rcl1
Ankhd1
Gfra1
Map3k3
Prpf40a
Arl6ip6
Syvn1
Ppfia3
Bcl6
Mapre3
Ypel4
Abhd18
Mrpl44
Tedc1
Got1
Wdr70
B4galt7
Pcx
Trub2
Atp5e
Maneal
Pmvk
Zfp687
Mis12
Derl2
Nectin3
Tomm40
Rhoj
S1pr2
Khsrp
Dap3
Kpnb1
Hnrnpl
Rgmb
Ube2c
Sin3a
Sorbs2
Enah
Gatad2a
Mdm2
Cdca8
9930104L06Rik
Nol6
Mrpl1
Copz1
Sel1l
Fbxw7
Rplp0
Znhit3
Gripap1
Hint2
Tpcn1
Iqcd
Pdk2
Zfp180
Ndufs4
Zfp101
Pcid2
Cul4a
Dhx30
Igsf9b
Vdr
Hmgcll1
Ugdh
Creb3l2
Agpat4
Psma8
Erg
Spag7
Mapk6
Tcf12
Anp32e
Pygo2
Scamp1
Ift140
Cramp1l
Arhgef40
Nynrin
Mtss2
Mvk
Mmab
Get4
Ccser2
Prkaca
Kdsr
Atp5g1
Meis1
Tbcb
Polr2i
Nap1l4
Tmem160
Sox6
Slc46a3
Selenoh
Frmd5
Cmtm5
Magel2
Katnb1
Per2
Fam110a
Kcnk2
Myh10
Rab40c
Pnn
Tspan4
Polr2l
Fbxl14
Cdca7l
Tmem218
Mrpl30
Mitd1
Zswim4
Opa1
Med23
Lsr
Fam187b
Ggct
Bcas3
Tfcp2
Timm17b
Pqbp1
Fbxl15
Wfikkn2
Calcoco1
Vps50
Chadl
Tgfb3
Pgd
Olfml1
Kmt5c
Ttc41
Hsp90b1
Tex14
Kansl2
Tmx2
Med19
Pan2
Rgs3
Lancl2
Arid1a
Dynll1
Cdo1
Mfsd8
Nup93
Leprot
Zfp869
Nup133
Pin1
3110082I17Rik
Gm51425
Yipf2
Timm29
Zfp513
Ufsp2
1700029J07Rik
Tctn2
Zswim3
Acot8
Vps51
Gins2
Drg2
Phb
Tmem198
Chpf
Aars
Pwwp2a
Syne1
Otub2
Plxna3
Tspan33
Gm5165
Ssrp1
Eapp
Ensa
Nr6a1
Kat6b
Bbx
Phf12
Dcaf11
Tjp2
Sptlc2
D16Ertd472e
Enpp2
Qrich1
Tcerg1
Hbp1
Ap2a1
Cyth2
Eif5
Srp68
Tomm22
Phka2
Mlec
Tomm70a
Srpk2
Pradc1
Cct7
Uvssa
Fkbp3
Palb2
Dctn5
Tma16
Rnf26
Tdrkh
Ankzf1
Dnttip2
Slc35a3
Mrps10
Bckdk
Gid4
Fxyd3
Dgcr8
Chd6
Atxn7l2
Tatdn3
Nsl1
Yif1a
Acsf3
Saxo1
Elavl2
Pnpla6
Ibtk
Nfe2l1
Cep192
Neurl2
Ctsa
Zfp668
Kmt2a
Denr
Gnai2
Jag2
Cenpu
Wdr77
Atp5pb
Rtn3
Mtf2
Cltc
Fam20b
Rps27l
Sec14l1
Xpc
Lsm3
Pa2g4
Hexim2
Cdk12
Rbm25
Hjurp
A730008H23Rik
Lrrc56
Hras
Spsb3
Nubp2
Tmem41b
Zfp143
Rab33b
Wwox
Gtf2a1
H3c15
H3c14
Tbck
Aimp1
Gm3448
Gm3417
Susd6
Phlda3
Pole3
4933430I17Rik
Trappc9
Ctnnb1
Nme1
Dnajc16
Ubr4
Slc35b1
Cct8
Pum3
Ilf2
Chmp7
Zxdc
Cbr3
Ints10
Slc30a5
Htra2
Aup1
Stat3
Nt5c3
Rbm39
9030025P20Rik
Rpl27
Bbs2
Ints4
Tcte3
Ermard
Styxl1
Mdh2
Mapkapk5
Taf9
Rad17
Ak6
Nuf2
Isy1
Mtch2
Tob1
Cfap20
Spty2d1
Birc2
Ddx41
Chordc1
Tpt1
Wdfy2
Get1
1700016H13Rik
Tecpr1
Zscan25
Gm3435
Plekha1
Gramd1b
Tubb4b
Fam149b
Ecd
Ttc14
Txnip
Rbbp8
Oprd1
Faf1
Esyt2
Med6
Armc1
Snrpc
Psmd3
Nabp1
Tfg
H4c3
Actr3
Rps12
Tsga10
Usp20
BC005624
Zfp607b
Calm1
Hes6
Gtf2f1
Zfand3
H3f3b
Aard
Tcf3
Dgat1
Smim4
Cactin
Itgb4
Ccnt2
Rps3a1
Rer1
Morn1
Crtc1
Srm
AW549877
Zcchc14
Eps15
Samd4b
Gmfg
Fitm2
Mapk14
Egr2
Lamp1
Aig1
Hspa4
Spdye4b
Rbak
Inip
Gpn3
Fam216a
Wdr92
Pno1
Grb2
Vta1
Inka1
Evpl
Ist1
Lig4
Eif4a3
Pop7
Utp3
Pip4p1
Kpna3
Sde2
Gale
Rgl2
Nfat5
Abcf2
Kansl3
Arhgef4
Stk32c
Nacc2
Supv3l1
Cipc
Ltbp1
Glce
Bod1l
Map3k7
Arhgap11a
Poc5
Mef2a
Gpatch8
Rpl3
Ube2d3
Ttll5
Erg28
Rel
Eif4e
Rps7
Hnrnpa2b1
Cbx3
Kifap3
Fam3c
Arf2
Mob1a
Rnf7
Zbtb40
Mettl25
Ccdc59
Mideas
Colgalt1
Rbbp5
Npc2
Isca2
Cep63
Anapc13
Hr
Mmp15
Fdxr
Sacm1l
Slc33a1
Spc25
Rap2a
Haspin
P4hb
Adnp
Abhd13
Fam227b
Dtwd1
Usp12
Zc3h18
Cfap298
Dcp1a
Yars
S100pbp
Pias4
Zfpl1
Cdca5
Man1b1
Rab6a
Ep400
Banp
Fra10ac1
Arl15
Birc5
Sfi1
Usp1
Pex3
Adat2
Ap1g1
Rps6ka5
Nup54
Cebpa
Rwdd1
Aph1b
Med17
Cyth1
Mknk2
Srgap2
Fam72a
Ube2j2
Txnl4b
Ireb2
Dhx38
Vps26c
Psmd5
Hspa5
2900026A02Rik
Kifc5b
Nomo1
Rab21
Naa35
Cpsf1
Kbtbd3
Jpt2
Spring1
Rnft2
Wdr27
1600012H06Rik
Ubald2
Ttll10
Clptm1
Srd5a1
Nsun2
Mafa
Atf2
Jun
Smim14
Ube2f
Sh3gl1
Snrnp200
1810024B03Rik
Ric8b
Timm13
Ssbp2
Cbwd1
Saysd1
Dhx33
Tubg1
Retreg3
Cwc22
Eif3f
Tex2
Tut7
Farsb
Rps19
Rad23b
Tmed2
Poldip3
Gm3739
Calr
Vapa
Trib1
Psmb2
Bcl9l
Smc6
Gen1
Fem1b
Usp53
Ubald1
Tram1
Cdk11b
Otud6b
Fam83b
Mindy2
Ppp2r5a
Cacybp
Xrcc1
Pinlyp
Supt4a
Setd3
Commd1
Ccnk
Nvl
Ddx20
H2ac19
H2ac18
Gas1
Fubp1
Dnajb4
Stag1
Lsm14b
Chmp5
Ccdc126
Bag1
Epg5
Atg2a
Ppwd1
Cenpk
Plag1
Chchd7
Btbd11
Herc2
Mfsd4b4
Eea1
Aff1
Nudt9
Clptm1l
Parp6
P4ha1
Ddost
Megf8
Sgms1
Cnot11
Polr3g
Mblac2
Ppp3cb
Mtres1
Ahctf1
Uspl1
Slc3a2
Mtmr2
Galk2
Cops2
Brpf1
Krr1
Septin7
Mrps31
Fam76a
Cnnm3
Xpnpep3
St13
Tmem19
Pxk
Rab5if
Wdr36
Agpat5
Ifnar1
Spa17
Siae
Dnajb1
Sphk2
Rpl18
Serpinb5
Dhx8
Slc25a32
Dcaf13
Yif1b
Thap12
Dab1
Csnk1g2
Cops8
Tars
Pdik1l
Ampd3
Nufip1
Gpalpp1
Slc39a13
Prcc
Sun1
Ss18l2
Gmfb
Wdr43
Srsf1
Oaz1
Nup50
Dnajb9
Eif1
Xab2
Pet100
Socs1
Ppp1cb
Taf4b
Mtmr6
Zbtb5
Setx
Pdap1
Bud31
Mmaa