ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035108 | Chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◣ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Sec14l1
T2
Klk10
Mtss2
Gnai2
Myh14
Aig1
Rbm25
Nt5c3
Nacc2
Ap2m1
Rpl27
Ccser2
Sppl2a
Sh3kbp1
Slc29a1
Brd2
Dhrs13
Tut4
Tanc1
Fgd4
Mrps31
Mast2
Lsg1
Fam53c
Rpl22
Phrf1
Ttll10
Emp1
Arf2
Denr
Dohh
Ss18l2
Prf1
Arntl
Arhgap19
Ankrd54
Ptger1
Gm973
Zfp24
Sgms2
Gramd1b
Uqcrh
Lrrc41
Ltbp1
Tmem144
Abhd1
Tjp2
Dhx33
Slc25a45
Lama4
Prss53
Ddx56
Echdc3
Cgref1
Sulf1
Rnase10
Sec14l2
Ppil3
Nif3l1
Arrdc4
Prkdc
Mcm4
Top2a
Cdyl
Cenpu
Wdr36
Uvssa
Tiam2
Slc39a14
Il18
Bco2
Aox1
Dok5
Ibtk
Pkn3
Nvl
Gfpt2
Zfp386
Inf2
Fem1b
Dtx1
Chordc1
Eif3f
Polg
Krr1
Utp3
Fam107b
Mrpl1
Mrpl21
Ighmbp2
Isy1
Mad1l1
Aldh4a1
Sox6
Spty2d1
Vta1
Zfp748
Tfg
Taf15
Mest
Ift27
Znhit1
Plod3
Rtn4
Nfatc2ip
Sp2
Tmem218
Adamtsl4
Slc39a3
Ppp2ca
Tmem41b
Gm829
Hnrnpc
Adgra1
Med23
C77080
Tcerg1
Cic
Pdzrn4
Dcp1a
Vps28
Exosc4
Drg2
Ngef
Mrpl30
Mitd1
Ska2
Prr11
Arid4a
Ptcd2
Mrps27
Rnf5
Lrpprc
Rita1
Ddx54
Ints1
Hdac10
Tardbp
Flad1
Sun1
Timm10
Anapc5
Hyal2
Aadacl2
Khsrp
Cstf2t
Madd
Ube2f
Psmd3
Eed
Tut1
Dusp12
Ppp6c
B4galt7
Dhx32
Prcc
Rbbp9
Ints10
Snrnp200
1810024B03Rik
Ndufv1
Wwox
St6galnac6
Nedd4
Nkd1
Kdsr
Rfx1
Fam149b
Ecd
Slc35d1
Rab11b
Mat2a
Rps7
Calm3
Ric8b
Smg8
Pou2af1
Zfp869
Gnb4
Gm5165
Tmem101
Ap4e1
Marcksl1
Panx3
Cln8
Slc35e4
Glo1
Mideas
Galk2
Cops2
Atg101
Ddx20
Wdfy2
Trub2
Rab21
Trib1
Zbtb40
Gucy2g
Mrpl44
Mdc1
Fdxr
Gtf2h4
Htra2
Aup1
Knl1
Hexim2
Mcm3
Snrpc
Nelfa
Dhx8
Ing4
Rptor
Creb5
Mgp
Fam180a
Rgs3
Mia
Zfp738
Ist1
Iqch
Aagab
Cct8
Zbtb2
Srp19
S100a10
Cdt1
Ppp1r11
Pole2
Atg12
Ap3s1
Slc33a1
Rhoq
Dad1
Abhd4
Dhx16
Hdac2
Get1
Dnajc16
Socs1
Proser2
Gcnt2
Krt13
Atp5b
Nuf2
Sertad4
BC049762
Bms1
Rtn3
B3gnt5
Gjb4
Prkci
Armc1
Txnl4b
Dhx38
Ndufv2
Acp2
Wdr92
Pno1
Sphk2
Rpl18
Col9a1
Mtmr2
Rab5b
Osbp
Cldn10
Ube2j2
Yipf2
Timm29
Map9
Tmem260
Dffb
Cep104
Nop14
Grk4
G3bp1
Diaph1
Kifc5b
Rbm34
Mtmr6
Ptov1
Ing3
Postn
Krtap1-5
Cltc
Hal
Eif3b
Ugdh
Mmachc
Ccdc163
Por
Katnb1
Banp
Prrg2
Nosip
Xpo7
Dpp9
Acot7
Ssbp1
Lrriq3
Fpgt
Alg14
Btbd9
Arid1a
Rcan1
Ints4
Sgcd
C2cd5
Krt16
Ubxn10
Arhgap11a
Nufip2
Dhrs9
Tulp4
Txndc2
Nup54
Ruvbl1
Lzts2
Filip1
Stard13
Ahcyl2
Slc39a2
Trp53rkb
Gipc1
Eif2ak3
Zbtb5
Znhit3
Atp5g2
Ndufs2
Xab2
Pet100
Rps12
Micalcl
Dnajc24
F13a1
Alx1
Dut
Ndufb1
Cpsf2
BC005537
Opa1
Egr2
Gm13285
Gm13290
Gm13289
Gm13288
Tnfaip6
Cdc25c
Sirt2
Nfkbib
Mfsd8
Ddost
Dnm2
Tma16
Megf8
Cela1
Top3b
Dars2
Rdm1
Ngdn
Kctd5
Hip1
Rpl38
Timm22
Cacng2
Bdkrb2
Uchl3
Nfe2l1
Ost4
Rangap1
Cdk12
Dus1l
Xylt1
Rrp15
Timm21
Fbxo15
Mlst8
Zfp317
Tmem94
Cmc2
Cenpn
Cops4
Ifnz
Hsd17b12
1110051M20Rik
Rab11fip3
Cxcl2
Cops8
Cbx5
Mt2
Gkn3
Fut10
Med4
Sh2d1b1
Stat3
Rbbp5
Yap1
Gbf1
Cetn4
Bbs12
Pde12
Zscan22
Evi5l
Colgalt2
Taco1
1600014C23Rik
Ttc1
Sec22b
Chchd2
Vps51
Sf3a3
Cdca8
9930104L06Rik
Clcn3
Rrm1
Sf3b2
Klhl20
Tox4
Rab2b
Spata13
Kifap3
Haus6
Pafah2
Rmc1
Dnmt1
Get3
Cct5
Atpsckmt
Kmt5c
Smarcal1
Slc41a1
Cd3eap
Lrrfip1
Ndufs7
Hk2
H1f8
Sfxn3
Loxl1
Nol6
Sh3gl1
Daam1
Psmb3
Ruvbl2
Gys1
Aplf
Kifc1
Prkcsh
Ccdc151
Hars2
Hars
Mrpl34
Abhd8
Galnt10
Esyt2
Cacybp
Tti2
Gpsm2
Spata1
Gng5
Pin1
Rpl3
Tbc1d10b
Mylpf
Lrrc51
Pafah1b3
Slc45a4
Brwd3
Nme1
Rmnd5a
Ddx18
Gosr1
Glrx5
Tcf3
Trp53rka
Npc1
Cradd
Gm3776
Slc6a12
Cdiptos
Cdipt
Glce
Plekhf2
Prmt5
Polq
Rpl19
Dtnb
Rsbn1
Nfkbil1
Atp6v1g2
Zfp747
Ylpm1
Bmf
Dusp22
Ncmap
Cipc
Chchd3
Zfp35
Cenpp
Poglut2
Bivm
Bod1l
Lars
Lrig2
Prdm10
Xrn1
Slc39a13
Frg1
Diras2
Gale
Hoxa5
Zfp385b
Tepsin
Ndufaf8
Tcea1
Tm9sf4
Zfp408
Tsc22d3
Tigd5
Eef1d
Uqcrc1
Kcnn4
Zfp719
Jmjd1c
Retsat
Elmod3
Cox14
Pate1
Irgq
Srp68
Emsy
Paip2b
Riok2
Cast
Mdm4
Hspg2
Atp5g3
Gcnt4
BC003965
Zfp180
Wdr24
Pxmp4
Cnpy2
Tpm2
Lgals2
Selenok
Gtpbp3
Shb
Arid4b
Pcnx3
Map3k11
Zfp472
Smim4
Cyth2
Mapre2
Abhd2
Limch1
Herpud2
Ddx24
Pigu
Sharpin
Maf1
Uqcrq
Yars
S100pbp
Pigm
Fubp3
Ccn3
Cd2bp2
Iftap
Wdr77
Atp5pb
Pex3
Adat2
Ppme1
C2cd3
Ints12
Gstcd
Txn2
Mob1a
Nudt15
Ilf3
Ciao3
Crybg1
Nsfl1c
Ndufaf1
Cmtm3
Abhd18
Fyco1
Phb
Pigc
4930558K02Rik
Ilf2
Pafah1b2
Glrx
Clcf1
Mblac1
Abcf2
Ap3s2
Rint1
Sigmar1
Mtg1
Cox7a2
Fam168a
Rtkn
Msantd4
Pik3r3
Copz1
Chchd5
Ints9
Hmbox1
Zxdc
Cwc22
Trim41
Zfp729a
Rab27b
Rpl26
Pmepa1
Elp5
Ctdnep1
Tspan9
Fam227a
Cby1
Poldip3
Exoc5
Ap5m1
M6pr
Rab3gap2
Tesk2
Itih5l-ps
Slc35b1
Rpa2
Gm51425
Tmem160
Gtpbp8
Gpatch3
Ankrd13a
Tmem242
Bbs5
Proser1
Nhlrc3
Lrch4
Ctnnd1
Nudt2
Kif24
Exosc5
Bckdha
Zfp560
Zfp607b
Ttll7
Ptrhd1
Cenpo
Sult2b1
Rbm15
Ddit4l
Pabpn1
Pcbp2
Ubald2
Fbxo11
Ttc14
Ap2a1
Ccdc174
Ccz1
Arhgef40
Stip1
Zfp574
Pdzd9
Rps19
Spns1
Fbxo30
Nqo1
Lgi3
Med6
Nudt5
Cdc123
Plekhb1
Fat3
Krt87
U2surp
Dapk3
Clpb
Polr1b
Zpr1
Anxa7
Zfp959
Sarnp
Ormdl2
Eloc
Leng8
Tle3
Zbtb10
Neil3
Yju2
Ambra1
Flcn
Spsb3
Nubp2
Gtf3c6
Ticam1
Sgms1
A130010J15Rik
Vps50
Cwc27
Sp1
Trim44
Zbtb3
Scaf11
Rpl36a
Commd2
Tacc2
Them6
Rel
Sacm1l
Tmed2
N4bp2l2
Kat7
Rab40c
Qtrt2
Ccdc191
Tmf1
Anxa5
1810062G17Rik
Sema6a
Tesk1
Gpn3
Fam216a
Map3k3
Mlf2
Sdhaf3
Uhrf1bp1l
Prpf18
Mettl25
Ccdc59
Ap1g1
Tmem167b
Mitf
Pknox1
Tst
Mpst
Snrpd3
Gucd1
Ncam1
Faap24
Nek4
Klhdc4
Sugct
Mplkip
Napg
Ifitm2
Stoml2
Gstp1
Zfp687
Gpatch8
Fra10ac1
Fbxl19
Psmg3
Clint1
Ptcd3
Polr1a
Camta1
Cdc42ep5
Cd38
Cbwd1
Slc35a1
Xpc
Lsm3
Ccdc107
Aars2
Robo1
Ino80b
S100b
Itga10
Ift140
Cramp1l
Cand1
Gfra1
Camk1d
Zfpl1
Cdca5
Eaf2
Mre11a
Ankrd49
Eapp
Spring1
Rnft2
Zfp595
Kdm4d
Cwc15
Prkaca
Trim45
Atf6
Zfp101
Tomm40
Eif4e
Srgap2
Fam72a
Wbp11
BC049715
Vim
Gins2
Clns1a
Gas7
Tpp2
Septin11
Dgat2
Phf12
Snx17
Eif2b4
Sipa1l1
Otud3
Bmpr1b
Acox2
Hbp1
Etfdh
4930579G24Rik
Ddx10
Mnat1
Fmn1
Nudcd1
Eny2
Tbc1d17
Akt1s1
Pex5
Pip4p1
Ufl1
Ube2q1
Rtraf
Strip1
Uckl1
Rab33b
Nudcd2
Hmmr
Mettl18
BC055324
Slc14a1
Cd109
Psmd1
Tfpt
Prpf31
Ttc4
Dusp23
Ankrd39
H4c6
Palb2
Dctn5
Rap2a
Lsm4
Ptbp1
Gm13287
Ndufaf7
Cebpz
Rab6a
Tax1bp1
Erv3
Tada3
Arpc4
Kbtbd7
Rps26
Josd2
Elp3
Dap
Got1
Wdpcp
Mdh1
Atp6v0a1
Gstm1
Dcstamp
Paxip1
Actr3
Thoc1
Ogt
Rnh1
Ptdss1
Mterf3
Rnf216
Zfp384
Fitm2
Znrd1as
Znrd1
Mrpl11
Agbl5
Pemt
Prpf40a
Arl6ip6
Afg1l
Ftsj1
Lgals3
Tssc4
Rbm28
Usp31
Soat2
Hjurp
A730008H23Rik
Cdk11b
Gatb
Fnbp4
Flrt3
Arhgap40
Zswim4
Slc25a25
Vrk1
Lsr
Fam187b
Ccar1
Snrpe
Fan1
Zfp444
Tgfb3
Cdk5rap1
Tlcd1
Evpl
Clu
Anp32e
Phb2
Emg1
Stx18
Ccar2
Angptl4
Mtf2
Pole3
4933430I17Rik
Fchsd2
Snd1
Gm13275
Ywhag
Ralgds
Poc5
Ppp1r37
Map4
Polr2m
Slc35b4
Hapln1
Spdye4b
Rbak
Leprot
Sirt4
Ncbp3
Xrcc5
Mrps10
Bpgm
Cnot1
Clptm1
Tctn2
Map3k4
Fbxo4
Ctnnal1
Paf1
Med29
Gne
Siah1b
Nsa2
Gfm2
Mrpl3
Tmem270
Mocs3
Dpm1
Srpk2
Lin52
Aldh6a1
H4c14
Mdh1b
Fastkd2
Rttn
Capg
Kpna3
Ppm1b
Zfp335
Gm13272
Sgsm3
Mrpl39
Usp5
Cdca3
Fam185a
Ccdc146
4930453N24Rik
Zfp422
Lypla2
Fkbp3
Mis12
Derl2
Cluap1
1700037C18Rik
Pan2
Rpl29
Med27
Vill
Nufip1
Gpalpp1
Kntc1
Tom1l2
Drc3
Apol7a
Gtf2a1
Amz2
Dcps
Cnot10
Uba3
Pla2g2e
Cpsf1
Eml6
Clcn5