ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4554102 | 3T3-L1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◣ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Kmt2a
Slc39a10
Denr
Dagla
Hnrnpa2b1
Cbx3
Haspin
Cenpu
Ddx17
Aldh18a1
Wwox
Gpr137
Bad
Cwc22
Zfp668
Snx12
Qrich1
Kansl3
Cdk12
Ints10
Psmd5
Slc25a25
Zfp523
Styxl1
Mdh2
Fut10
Atg101
Eapp
Polq
Ube2d3
Cipc
Rbm39
Ncbp3
Eps15
Spdl1
Atxn7l2
Bzw1
Adgrl1
Mettl18
BC055324
Eif4a3
Mapk14
Pradc1
Cct7
Stxbp4
Cox11
Zfp41
Nudt3
Arl14ep
Wdr77
Atp5pb
Poldip3
Arf3
Coq9
Ciapin1
Septin7
Rps19
Ube2z
Smarcd2
Ube2i
Zzz3
AW549877
Prpsap1
Hjurp
A730008H23Rik
Epc2
Lamp1
Tab1
H3c15
H3c14
H2ac19
H2ac18
Rnf115
Polr3c
Capn15
Pcbp2
Mob1a
Fubp1
Dnajb4
B4galt7
Gpx8
Rad1
Brix1
Gins3
Trim41
Hspa4
Mrpl12
Mdm2
Proser1
Nhlrc3
Dffb
Cep104
Zfp142
Bcs1l
Gins2
Mrnip
Arhgef1
Hdgf
Yipf4
Fam53c
Cpsf1
4931408C20Rik
Znrd1as
Znrd1
Nfkbiz
Mtf2
Glce
Ift46
Ckap2
Cpsf6
Mcph1
Pfdn5
Gm3448
Gm3417
Cct8
Tcte3
Ermard
Ireb2
Tex14
Ska2
Prr11
Atf7
Ptcd2
Mrps27
Ect2
Slc25a4
Tardbp
Smarcd1
Nudt1
Cops4
Eif1ad
Banf1
Usp3
Tfb2m
Cnst
Mrpl21
Ighmbp2
Ahctf1
Cox7a2
Cnot8
Nsun3
Atf2
Insr
Rpl7l1
Prdm10
Washc1
Xpc
Lsm3
Ttc14
Dnajc7
Exosc6
Smc2
Armh3
Yod1
Slc35e3
Rps28
BC004004
Sgms1
Ncbp2
0610012G03Rik
Dck
Kazald1
Ssbp2
Flcn
Sfi1
Ddx20
Eif4g2
Dicer1
Mak16
Mettl1
Eef1akmt3
Slc39a9
Erh
Tbpl1
Tomm22
Ddhd2
Gm13276
Myef2
Cdkn2aipnl
Arid1a
Cmc2
Cenpn
Rraga
Rubcn
Creld2
Alg12
Fyttd1
Rbm25
Rab33b
Cdc25c
Gtse1
Polr2a
Rap2b
Gabarap
H4c18
Rfwd3
Ppm1l
Srp68
Rpn2
Mroh8
Pdia5
Ssrp1
Ankrd17
Smim10l1
Lrpprc
Txnip
Wdr27
1600012H06Rik
Ankfy1
Stat1
Spring1
Rnft2
Lsm5
C1qbp
Myl12a
Lyz2
D16Ertd472e
Ddx42
Ccdc47
Calm3
Brpf1
Smg8
Gtf3c6
Kif20b
Nup35
Rgl2
Tut7
Sod2
Ints13
Fgfr1op2
Kdsr
Micu3
Dbr1
Ndufa5
Asb15
Akr1b3
Tigd5
Eef1d
Zcchc4
H4f16
Zfp113
Ska3
Mrpl57
Pxmp2
Pole
Fam133b
Gga1
Scamp1
Gfm1
H1f4
H2bc6
Wdr90
Tln1
Creb3
Fbxl14
Pip5k1c
Iqch
Aagab
Phrf1
T2
Cnot6
Gipc1
Mia2
Cdiptos
Cdipt
Rita1
Por
Ddx54
Slbp
Ccdc85c
Prkdc
Mcm4
Ankrd13a
Taf15
Rpl22
Arrdc4
Septin11
Gnai2
Akirin1
Rmnd5a
Dut
Jag2
Asah1
Sspn
Sash1
Fus
Ndufb1
Cpsf2
Aldh4a1
Cln8
Atg12
Ap3s1
Ptov1
Kctd2
Atp5h
Ift27
Tmem260
Hdac2
Arntl
Arid4a
Ndst2
Hyal2
Uchl3
Uqcrh
Lrrc41
Myh14
Psip1
Ptcd3
Polr1a
Tada3
Arpc4
Dohh
Prkci
Galnt10
Ptdss1
Mterf3
Noct
Madd
Eif3b
Cenpe
Cenpp
Eed
Mlst8
Ss18
Bcl6
BC005537
Dnmt1
Lsg1
Sp2
Atrnl1
Polg
Gnb2
Ube2b
Paxip1
Rtn3
Pik3r3
Pknox1
Dlst
G3bp1
Raly
Wasl
Flad1
Mat2a
Tst
Mpst
Uros
Bccip
Mtmr14
Cwc27
Diaph1
Cul2
Cltc
Smc3
Sharpin
Maf1
Fbxo33
Robo1
Map7d1
Fam20b
Cd164
Rps27l
Rps29
Oxr1
Ankrd54
Sec14l1
Abhd16a
Dgat2
Pa2g4
Rfx1
Zfp219
Pkia
Abhd2
Hexim2
Fgd4
Rhbdd3
Ewsr1
Rpl19
Slc35e2
Paip2b
Tspan4
Mfsd8
Nphp4
Kcnab2
Dpp9
Hnrnpc
Lrrc56
Hras
Cdca7l
Spsb3
Nubp2
Rab5b
Akt2
Cd3eap
Mtss2
Selenow
Polr2l
Ap2m1
Eif2ak3
Tmem41b
Zfp869
Pfdn4
Srxn1
Tepsin
Ndufaf8
Osbp
Top2a
Rnasek
Bzw2
Ankmy2
Gm5165
Zfp143
Cnot1
Atp5b
Per2
Fam227a
Cby1
Cdt1
Atp6v0c
Sp1
Tjp2
Tom1
Brd2
Dot1l
Abhd18
Tcp11l2
Gtf2a1
Wasf1
Cdc40
Frat2
Tbck
Aimp1
Mvk
Mmab
Get3
Susd6
Phlda3
Pole3
4933430I17Rik
Slc39a3
Rab11b
Trappc9
Ctnnb1
Nme1
Dnajc16
Stip1
Get4
Camta1
Ubr4
Slc35b1
Uvssa
Ccser2
Mblac1
Tnrc6b
Arl2
Pum3
Ephb2
Nmral1
Ilf2
Rnf5
Chmp7
Atg16l2
Zxdc
Cbr3
Tbc1d17
Akt1s1
Slc30a5
Htra2
Aup1
Ankhd1
Ube2c
Dnm2
Rbbp6
Frmd6
Stat3
Nt5c3
Them6
9030025P20Rik
Rpl27
Bbs2
Ints4
Pafah1b3
Fkbp3
Frat1
Mapkapk5
Limch1
Taf9
Rad17
Ak6
Nuf2
Isy1
Fdft1
Cic
Tmem218
Mtch2
Tob1
Cfap20
Spty2d1
Birc2
Ddx41
Fanci
Chordc1
Traf2
Khsrp
Gatad2a
Tpt1
Lrch4
Wdfy2
Magi1
Get1
Mrpl30
Mitd1
1700016H13Rik
Prkaca
Fchsd2
Tecpr1
Mis12
Derl2
Tcerg1
Zscan25
Gm3435
Plekha1
Mrps11
Mrpl46
Gramd1b
Rusc2
Hexim1
Gpr108
Cspp1
Cops5
Nfatc2ip
Tubb4b
Pip4k2b
Fam149b
Ecd
Glrx5
Cnot3
Cct5
Atpsckmt
Rbbp8
Oprd1
Faf1
Tomm40
Esyt2
Med6
Zswim4
Armc1
Snrpc
Zfp687
Psmd3
Nabp1
Tfg
Palb2
Dctn5
Nudt2
Kif24
H4c3
Opa1
Actr3
Rps12
Tsga10
Kpnb1
Usp20
BC005624
Zfp607b
Calm1
Utp18
Mbtd1
Hes6
Gtf2f1
Pan2
Zfp24
Zfand3
Ttll7
H3f3b
Aard
Tcf3
Kmt5c
Dgat1
Smim4
Ttc41
Hsp90b1
Cactin
Itgb4
Prpf40a
Arl6ip6
Ccnt2
Rps3a1
Rer1
Morn1
Crtc1
Srm
Zcchc14
Samd4b
Gmfg
Fitm2
Sigmar1
Egr2
Aig1
Ngdn
Zfp654
Cggbp1
Nup133
Spdye4b
Rbak
Inip
Gpn3
Fam216a
Wdr92
Pno1
Grb2
Vta1
Inka1
Evpl
Ist1
Lig4
Pop7
Utp3
Pip4p1
Pin1
Kpna3
Sde2
Rab28
Gale
Hbp1
Nfat5
Ap2a1
Abcf2
Arhgef4
Stk32c
Nacc2
Supv3l1
Ltbp1
Zfp574
Bod1l
Map3k7
Arhgap11a
Poc5
Mef2a
Gpatch8
Rpl3
Ift140
Cramp1l
3110082I17Rik
Ttll5
Erg28
Rel
Dap3
Eif4e
Tmem198b
Dnajc14
Rps7
Kifap3
Fam3c
Arf2
Uqcrq
Rnf7
Hdac1
Zbtb40
Mettl25
Ccdc59
Mideas
Colgalt1
Rbbp5
Npc2
Isca2
Ensa
Cep63
Anapc13
Hr
Mmp15
Fdxr
Zfyve21
Xrcc3
Nectin3
Sacm1l
Slc33a1
Spc25
Rap2a
P4hb
Adnp
Abhd13
Fam227b
Dtwd1
Usp12
Zc3h18
Nr6a1
Cfap298
Dcp1a
Yars
S100pbp
Pias4
Zfpl1
Nlk
Cdca5
Man1b1
Rab6a
Ep400
Banp
Fra10ac1
Arl15
Birc5
Cdca8
9930104L06Rik
Wasf2
Usp1
Pex3
Adat2
Ap1g1
Rps6ka5
Nup54
Med23
Cebpa
Rwdd1
Aph1b
Med17
Lsr
Fam187b
Cyth1
Mknk2
Srgap2
Fam72a
Ube2j2
Katnb1
Txnl4b
Kansl2
Dhx38
Vps26c
Hspa5
2900026A02Rik
Kifc5b
Nomo1
Rab21
Naa35
Kbtbd3
Jpt2
Smarcal1
Ubald2
Ss18l1
Psma7
Nol6
Ttll10
Rab40c
Clptm1
Srd5a1
Nsun2
Mafa
Rbbp9
Jun
Smim14
Ube2f
Sh3gl1
Snrnp200
1810024B03Rik
Ric8b
Timm13
Chchd2
Cbwd1
Saysd1
Dhx33
Tubg1
Retreg3
Eif3f
Tex2
Farsb
Rad23b
Tmed2
Gm3739
Calr
Vapa
Tacc1
Gm51425
Lancl2
Yipf2
Trib1
Timm29
Psmb2
Ndufs7
Bcl9l
Smc6
Gen1
Fem1b
Usp53
Ubald1
Tram1
Myl12b
Cdk11b
Otud6b
Fam83b
Mindy2
Ppp2r5a
Mrpl1
Cacybp
Xrcc1
Pinlyp
Supt4a
Setd3
Commd1
Ccnk
C1d
Copz1
Nvl
Mrpl44
Gas1
Hnrnpl
Stag1
Prmt1
Stt3a
Lsm14b
Chmp5
Ccdc126
Bag1
Epg5
Atg2a
Ggct
Ppwd1
Phf12
Cenpk
Atp5g1
Plag1
Chchd7
Btbd11
Atp8a1
Herc2
Mfsd4b4
Eea1
Aff1
Nudt9
Oasl1
Clptm1l
Parp6
P4ha1
Ddost
Sel1l
Megf8
Cnot11
Polr3g
Mblac2
Ppp3cb
Mtres1
Uspl1
Slc3a2
Myh10
Mtmr2
Galk2
Cops2
Krr1
Mrps31
Dbp
Meis1
Fam76a
Cnnm3
Xpnpep3
St13
Tmem19
Pxk
Rab5if
Wdr36
Agpat5
Ifnar1
Spa17
Siae
Dnajb1
Sphk2
Rpl18
Serpinb5
Dhx8
Slc25a32
Dcaf13
Yif1b
Thap12
Dedd2
Dab1
Csnk1g2
Cops8
Tars
Pdik1l
Ampd3
Nufip1
Gpalpp1
Slc39a13
Prcc
Fbxw7
Sun1
Pnn
Dynll1
Ss18l2
Gmfb
Wdr43
Srsf1
Oaz1
Nup50
Dnajb9
Eif1
Cyth2
Xab2
Pet100
Socs1
Ppp1cb
Taf4b
Stx16
Zfp513
Mtmr6
Zbtb5
Setx
Pdap1
Bud31
Mmaa
Rad51ap1
D6Wsu163e
Fer
Polr3f
Dzank1
Tsc22d1
Jund
Pabpc4
Nudcd2
Hmmr
Fam204a
Ctnna1
Timeless
Flywch1
Git2
Fzd2
Evi5l
Cilk1
Ddx18
Exosc5
Bckdha
Tedc1
Srp19
Ccni
2010109A12Rik
Slc25a42
Mgrn1
Errfi1
Ppm1b
Gtf2b
Galnt9
Alpk1
Narf
Rptor
Letm1
Itgb1bp1
Cpsf3
Sgms2
Kat6b
Dgcr8
Bsdc1
Kdm4b
Rfxank
Gm45929
Borcs8
Atg16l1
Leng8
Virma
Polr2e
Cpped1
Sugp2
Armc6
Naa40
Rbm15
Traf7
Nudt15
Dcaf11
Ahcyl1
Zfp27
Miga2
Ddx56
Chd6
Cdc34
Zfp317
Dad1
Abhd4
Rbx1
Nt5c2
Gtf3c2
Agap1
Npm1
Cox7a2l
Rpl36al
Mgat2
Mcm7
Ap4m1
Tbccd1
Dnajb11
Arhgap19
Ufl1
Tmtc3
Lrrc27
Cep290
Opa3
Eif2s1
Atp6v1d
Glo1
Pigm
Mtg1
Canx
Psmb3
Ulk2
Ccng2