ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Sox9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◣ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Pip5k1c
Kmt2a
Iqch
Aagab
Cmc2
Cenpn
Lrpprc
Phrf1
T2
Fam53c
Calm3
Flcn
Cnot6
Gipc1
Ptcd2
Mrps27
Mia2
Cdiptos
Cdipt
Tardbp
Rita1
Por
Ddx54
Ppm1l
Slbp
Ccdc85c
Denr
Prkdc
Mcm4
Ankrd13a
Taf15
Rpl22
Arrdc4
Tigd5
Eef1d
Septin11
Gnai2
Akirin1
Rmnd5a
Dut
Jag2
Asah1
Prdm10
Cenpu
Sspn
Atg101
Sash1
Fus
Ndufb1
Cpsf2
Aldh4a1
Cln8
Atg12
Ap3s1
Ptov1
Kctd2
Atp5h
Ift27
Tmem260
Hdac2
Arntl
Arid4a
Ndst2
Hyal2
Uchl3
Uqcrh
Lrrc41
Myh14
Psip1
Ptcd3
Polr1a
Tada3
Arpc4
Dohh
Prkci
Eapp
Galnt10
Ptdss1
Mterf3
Noct
Madd
Eif3b
Cenpe
Cenpp
Eed
Mlst8
Rpn2
Mroh8
Polr2a
Ss18
Bcl6
BC005537
Dnmt1
Lsg1
Wdr77
Atp5pb
Sp2
Atrnl1
Sod2
Polg
Gnb2
Ube2b
Paxip1
Rtn3
Myl12a
Pik3r3
Pknox1
Dlst
G3bp1
Raly
Mtf2
Wasl
Flad1
Mat2a
Tst
Mpst
Uros
Bccip
Mtmr14
Cwc27
Diaph1
Cul2
Cltc
Smc3
Bzw1
Sharpin
Maf1
Fbxo33
Robo1
Map7d1
Fam20b
Cd164
Rps27l
Rps29
Oxr1
Ankrd54
Sec14l1
Qrich1
Xpc
Lsm3
Abhd16a
Dgat2
Pa2g4
Ska2
Prr11
Rfx1
Zfp219
Pkia
Abhd2
Hexim2
Fgd4
Cdk12
Rhbdd3
Ewsr1
Rpl19
Slc35e2
Rbm25
Paip2b
Hjurp
A730008H23Rik
Proser1
Nhlrc3
Tspan4
Mfsd8
Nphp4
Kcnab2
Dpp9
Hnrnpc
Lrrc56
Hras
Cdca7l
Spsb3
Nubp2
Rab5b
Akt2
Cd3eap
Mtss2
Selenow
Polr2l
Ap2m1
Eif2ak3
Tmem41b
Zfp869
Pfdn4
Fbxl14
Srxn1
Tepsin
Ndufaf8
Osbp
Top2a
Rnasek
Bzw2
Ankmy2
Gm5165
Zfp143
Cnot1
Atp5b
Per2
Fam227a
Cby1
Cdt1
Rab33b
Atp6v0c
Sp1
Tjp2
Wwox
Tom1
Brd2
Dot1l
Abhd18
Tcp11l2
Gtf2a1
Wasf1
Cdc40
H3c15
H3c14
Frat2
Tbck
Aimp1
Mvk
Mmab
Gm3448
Gm3417
Get3
Susd6
Phlda3
Pole3
4933430I17Rik
Slc39a3
Rab11b
Trappc9
Ctnnb1
Nme1
Dnajc16
Stip1
Get4
Camta1
Ubr4
Slc35b1
Cct8
Uvssa
Ccser2
Mblac1
Tnrc6b
Arl2
Pum3
Ephb2
Nmral1
Ilf2
Rnf5
Chmp7
Atg16l2
Zxdc
Cbr3
Tbc1d17
Akt1s1
Ints10
Slc30a5
Mrpl21
Ighmbp2
Htra2
Aup1
Ankhd1
Ube2c
Dnm2
Rbbp6
Frmd6
Stat3
Nt5c3
Rbm39
Them6
9030025P20Rik
Rpl27
Bbs2
Ints4
Pafah1b3
Fkbp3
Tcte3
Ermard
Styxl1
Mdh2
Frat1
Mapkapk5
Limch1
Taf9
Rad17
Ak6
Nuf2
Isy1
Fdft1
Cic
Tmem218
Mtch2
Tob1
Cfap20
Spty2d1
Birc2
Ddx41
Fanci
Chordc1
Traf2
Khsrp
Gatad2a
Tpt1
Lrch4
Wdfy2
Magi1
Get1
Mrpl30
Mitd1
1700016H13Rik
Prkaca
Fchsd2
Tecpr1
Mis12
Derl2
Tcerg1
Zscan25
Gm3435
Plekha1
Mrps11
Mrpl46
Gramd1b
Rusc2
Hexim1
Gpr108
Cspp1
Cops5
Nfatc2ip
Tubb4b
Pip4k2b
Fam149b
Ecd
Ttc14
Glrx5
Txnip
Cnot3
Cct5
Atpsckmt
Rbbp8
Oprd1
Faf1
Tomm40
Esyt2
Med6
Zswim4
Armc1
Snrpc
Zfp687
Psmd3
Nabp1
Tfg
Palb2
Dctn5
Nudt2
Kif24
H4c3
Opa1
Actr3
Rps12
Tsga10
Kpnb1
Usp20
BC005624
Dffb
Cep104
Zfp607b
Calm1
Utp18
Mbtd1
Hes6
Gtf2f1
Pan2
Zfp24
Zfand3
Ttll7
H3f3b
Aard
Tcf3
Kmt5c
Dgat1
Smim4
Ttc41
Hsp90b1
Cactin
Itgb4
Prpf40a
Arl6ip6
Ccnt2
Rps3a1
Rer1
Morn1
Crtc1
Srm
AW549877
Zcchc14
Eps15
Samd4b
Gmfg
Fitm2
Sigmar1
Mapk14
Egr2
Lamp1
Aig1
Ngdn
Zfp654
Cggbp1
Nup133
Hspa4
Spdye4b
Rbak
Inip
Gpn3
Fam216a
Wdr92
Pno1
Grb2
Vta1
Inka1
Evpl
Ist1
Lig4
Eif4a3
Pop7
Utp3
Pip4p1
Pin1
Kpna3
Sde2
Rab28
Gale
Hbp1
Rgl2
Nfat5
Ap2a1
Abcf2
Kansl3
Arhgef4
Stk32c
Nacc2
Supv3l1
Cipc
Ltbp1
Zfp574
Glce
Bod1l
Map3k7
Arhgap11a
Poc5
Mef2a
Gpatch8
Rpl3
Ube2d3
Ift140
Cramp1l
3110082I17Rik
Ttll5
Erg28
Rel
Dap3
Eif4e
Tmem198b
Dnajc14
Rps7
Hnrnpa2b1
Cbx3
Kifap3
Fam3c
Arf2
Uqcrq
Mob1a
Rnf7
Hdac1
Zbtb40
Mettl25
Ccdc59
Mideas
Colgalt1
Rbbp5
Npc2
Mdm2
Isca2
Ensa
Cep63
Anapc13
Hr
Mmp15
Kdsr
Fdxr
Zfyve21
Xrcc3
Ssrp1
Nectin3
Sacm1l
Slc33a1
Spc25
Rap2a
Haspin
P4hb
Adnp
Abhd13
Fam227b
Dtwd1
Usp12
Zc3h18
Nr6a1
Cfap298
Dcp1a
Yars
S100pbp
Pias4
Zfpl1
Nlk
Cdca5
Tex14
Man1b1
Rab6a
Ep400
Banp
Fra10ac1
Arl15
Birc5
Cdca8
9930104L06Rik
Wasf2
Sfi1
Usp1
Pex3
Adat2
Atf7
Ap1g1
Rps6ka5
Nup54
Med23
Cebpa
Rwdd1
Aph1b
Med17
Lsr
Fam187b
Cyth1
Mknk2
Srgap2
Fam72a
Ube2j2
Katnb1
Txnl4b
Kansl2
Ireb2
Dhx38
Vps26c
Cdc25c
Psmd5
Hspa5
2900026A02Rik
Kifc5b
Nomo1
Rab21
Naa35
Cpsf1
Kbtbd3
Jpt2
Spring1
Rnft2
Wdr27
1600012H06Rik
Smarcal1
Ubald2
Ss18l1
Psma7
Nol6
Ttll10
Rab40c
Clptm1
Srd5a1
Nsun2
Mafa
Slc25a25
Rbbp9
Atf2
Jun
Smim14
Ube2f
Sh3gl1
Snrnp200
1810024B03Rik
Ric8b
Timm13
Ssbp2
Chchd2
Cbwd1
Saysd1
Dhx33
Tubg1
Retreg3
Pradc1
Cwc22
Cct7
Eif3f
Tex2
Tut7
Farsb
Rps19
Rad23b
Tmed2
Poldip3
Gm3739
Calr
Vapa
Tacc1
Gm51425
Lancl2
Yipf2
Trib1
Timm29
Psmb2
Ndufs7
Bcl9l
Smc6
Gen1
Fem1b
Usp53
Ubald1
Tram1
Myl12b
Cdk11b
Otud6b
Fam83b
Mindy2
Ppp2r5a
Mrpl1
Cacybp
Xrcc1
Pinlyp
Supt4a
Setd3
Commd1
Ccnk
C1d
Copz1
Nvl
Ddx20
Mrpl44
H2ac19
H2ac18
Gas1
Fubp1
Dnajb4
Hnrnpl
Stag1
Prmt1
Stt3a
Lsm14b
Chmp5
Ccdc126
Bag1
Epg5
Atg2a
Ggct
Ppwd1
Phf12
Cenpk
Atp5g1
Plag1
Chchd7
Btbd11
Atp8a1
Herc2
Mfsd4b4
Eea1
Aff1
Nudt9
Oasl1
Clptm1l
Parp6
P4ha1
Ddost
Arid1a
Sel1l
Megf8
Sgms1
Cnot11
Polr3g
Mblac2
Ppp3cb
Mtres1
Ahctf1
Uspl1
Slc3a2
Myh10
Scamp1
Mtmr2
Galk2
Cops2
Brpf1
Krr1
Septin7
Mrps31
Dbp
Meis1
Fam76a
Cnnm3
Xpnpep3
St13
Tmem19
Pxk
Rab5if
Wdr36
Agpat5
Ifnar1
Spa17
Siae
Dnajb1
Sphk2
Rpl18
Serpinb5
Dhx8
Slc25a32
Dcaf13
Yif1b
Thap12
Dedd2
Dab1
Csnk1g2
Cops8
Tars
Pdik1l
Ampd3
Nufip1
Gpalpp1
Slc39a13
Prcc
Fbxw7
Sun1
Pnn
Dynll1
Ss18l2
Gmfb
Wdr43
Srsf1
Oaz1
Nup50
Dnajb9
Eif1
Cyth2
Xab2
Pet100
Socs1
Smg8
Ppp1cb
Taf4b
Stx16
Zfp513
Mtmr6
Zbtb5
Setx
Pdap1
Bud31
Mmaa
Rad51ap1
D6Wsu163e
Fer
Polr3f
Dzank1
Tsc22d1
Jund
Pabpc4
Nudcd2
Hmmr
Fam204a
Ctnna1
Timeless
Smarcd2
Flywch1
Git2
Stxbp4
Fzd2
Cox11
Zfp668
Evi5l
Cilk1
Ddx18
Exosc5
Bckdha
Tedc1
Srp19
Ccni
2010109A12Rik
Slc25a42
Mgrn1
Errfi1
Ppm1b
Gtf2b
Galnt9
Alpk1
Narf
Rptor
Letm1
Itgb1bp1
Cpsf3
Sgms2
Kat6b
Dgcr8
Bsdc1
Kdm4b
Rfxank
Gm45929
Borcs8
Atg16l1
Leng8
Virma
Polr2e
Cpped1
Sugp2
Armc6
Spdl1
Naa40
Rbm15
Ect2
Traf7
Nudt15
Dcaf11
Ahcyl1
Zfp27
Miga2
Snx12
Ddx56
Chd6
Cdc34
Zfp317
Dad1
Abhd4
Rbx1
Nt5c2
Gtf3c2
Agap1
Npm1
Cox7a2l
Rpl36al
Mgat2
Fut10
Mcm7
Ap4m1
Tbccd1
Dnajb11
Arhgap19
Ufl1
Tmtc3
Rraga
Lrrc27
Cep290
Opa3
Eif2s1
Atp6v1d
Glo1
Pigm
Mtg1
Canx
Psmb3
Mrpl12
Ulk2
Ccng2
Arl6ip1
Uchl5
Ro60
Ppm1n
Nsfl1c
Ncbp2
N4bp2l2
0610012G03Rik
Ubb
Anapc10
Abce1
Ube2d2a
Cops4
Rnf14
Notch2
Birc6
Ube2i
Ttc32
Map2k7
Atg5
Abcf3
Ssbp1
Sh3kbp1
Hinfp
Nudt5
Cdc123
Slc35e1
Hadhb
Hadha
Recql
Mad2l2
Golt1b
Etfrf1
Cherp
Casc1
Tcp1
Mrpl18
Mob4
Mcoln1
Klf10
Trmt2a
Ranbp1
Tnfaip3
Nat10
Fam76b
Cep57
Atxn7l2
Prepl
Camkmt
Dhrs13
Amz2
Kctd9
Cdca2
Bms1
Lrig1
Ifrd1
Plekha7
Knl1
Akap11
Luc7l2
Hint3
Ubxn1
Mis18bp1
Eif4a1
Mxd4
Gcdh
Znhit1
Plod3
Ap4e1
Zfp748
Sugct
Rpl26
Mplkip
Arrdc2
Ptcd1
Cpsf4
Met
Zzz3
Tbc1d10b
Rheb
Mylpf
Gtf2h3
Eif2b1
Pdzrn4
Uhrf2
Fam160a2
Klf7
Phb2
Emg1
Cirbp
Sec61b
Alg2
Tbcb
Polr2i
Vamp4
U2surp
Kntc1
Clcn4
Wipi2
Zfp719
Pde12
Usp2
Tmem242
Kctd5
Trappc8
Taf4
Esco1
Med18
Zdhhc5
H2ax
Ppp6r3
Csnk1a1
Ift22
Lars
Mphosph10
Mcee
B3gntl1
Nup107
Zbtb37
Tom1l2
Drc3
Timm22
Plekhf2
Med30
Dst
Ddx50
Gatb
Rplp0
Cox7a2
Mycbp
Aaas
Ufsp2
Ccdc88a
1700029J07Rik
Nop14
Grk4
Ndufaf5