ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15441805 | Unclassified
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◣ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Polr2a
Eapp
Cenpu
Rbbp8
Cdiptos
Cdipt
Gtf2a1
Lrpprc
Pole3
4933430I17Rik
Gtf2f1
Slc35b1
Dnajc16
Ppm1l
Ctnnb1
H3f3b
Pum3
Tob1
Kmt2a
Fus
Eif1
Arl15
Nme1
Hexim2
Trappc9
Gm3448
Gm3417
Gm3435
Farsb
Vapa
Tram1
Tcte3
Ermard
Tbck
Aimp1
Birc5
Rpl22
Ubr4
Htra2
Aup1
H4c3
Cactin
Faf1
9030025P20Rik
Klf7
Hjurp
A730008H23Rik
Chmp7
Mapkapk5
Dgat1
Lsm14b
Rad51ap1
D6Wsu163e
Jund
Parp6
Hsp90aa1
Sde2
Nudt9
Get4
Mknk2
Magi1
Proser1
Nhlrc3
Cdk11b
Gpn3
Fam216a
Rpl3
Ubb
Taf4b
Spa17
Siae
Cfap20
Tsga10
Ccnt2
Cirbp
Smc6
Gen1
Hadhb
Hadha
P4ha1
Nabp1
Taf9
Rad17
Ak6
Cltc
Cdc34
Ddx41
Dnaja1
Uvssa
Tubg1
Retreg3
Irf8
Errfi1
Dnajb9
Cct8
Eif4e
Nup133
Tex14
Hint3
Mtmr14
Clptm1
Ier5
Klf4
Wdr77
Atp5pb
Gale
Usp12
Znfx1
Ptcd1
Cpsf4
Surf6
Nfat5
Pop7
Tardbp
Crp
Steap4
Xpnpep3
St13
Timm13
Runx1
Rps12
Eftud2
Ccdc103
Prdm15
Mtf2
Mat2a
Hes6
Carmil3
Tcf3
2410002F23Rik
Ptpn2
Birc2
Ndufaf5
Esf1
Get1
Med6
Vps26c
Hspa9
Abhd10
Robo1
Stk32c
Lrrc27
Mmaa
N4bp2l2
Mpp7
Tigd5
Eef1d
Slc3a2
Irf7
Tspan4
Polr2l
Calm1
Tnpo2
H4f16
Rer1
Morn1
Gtf3c2
Hnrnph1
Tmem147
Spen
Ints4
Psmd3
Tmtc3
Cep290
Map3k7
Esyt2
Rhob
Gmfb
Nomo1
Spg11
Bzw1
H3c15
H3c14
H2ac19
H2ac18
Anapc10
Abce1
Tnfaip3
Haus6
Picalm
Ifnar1
Atp6v0d1
Usp53
Rab33b
Kpna3
Pxk
Ahcyl1
H2-L
H2-D1
Ppp1cb
Ifrd1
Zfp868
Paxip1
Clptm1l
Ctnna1
Dnaja4
Man1b1
Polr3f
Dzank1
Hnrnpab
Borcs7
Slbp
Bbs2
Spdye4b
Rbak
Otud6b
Rapgef6
Bdp1
Zc3h15
Trappc8
Casc3
Poc5
Megf8
Fbxw7
Mob4
Nav3
Zbtb37
Ythdc1
Tmem41b
Taf6
Cnpy4
Mrpl10
Lrrc46
Ppp1r12a
Ssbp2
Setx
Srsf9
Oaz1
Amd2
Amd1
H2ax
Med17
Peli1
Eef2
Tut7
Ywhag
Ftl1
Dnajb12
Plpp3
Srsf1
Gtf2h3
Eif2b1
Emc7
Ppp1r8
Txnl1
Chordc1
Exosc5
Bckdha
Rab15
Prdx1
1810037I17Rik
Cox7a2l
Alpk1
Gbp10
Wdfy2
Saysd1
Rnf216
Birc3
Cyrib
Pabpc4
Sec61b
Alg2
Taf4
Chrac1
Serpina3i
Snrpc
Atg5
Zfp143
Actr3
Ufl1
Septin7
Ndufa10
Lig4
Abhd13
Tpt1
Ccni
2010109A12Rik
Virma
Eef1g
Wfikkn2
Akap10
Fam241a
Mis18bp1
Sf3b1
Grb2
Arf6
Btg1
Ddx5
Cep95
Colgalt1
Tcp1
Mrpl18
Rps2
Klhl18
Kif9
Riok1
Cage1
B2m
Bclaf1
Nuf2
Ric8b
Thap12
H2-K1
Med18
Elf3
Wdr43
Trmt2a
Ranbp1
H4c18
Stam
Matr3
Kansl3
Cebpa
Cdkn2aip
Ext1
Vta1
Rnf7
Hspa4
Ttll5
Erg28
Wipi2
Slc46a2
Tfg
Naa40
Mafb
Smg9
Pdap1
Bud31
Cops8
Ep400
Gadd45b
Agfg1
Atg2a
Cherp
Atad3a
Tuba1c
Yif1b
Ccna2
Ppp6r1
Actn4
Ankrd22
Ankrd65
Uchl3
Map2k7
Rbm47
Kbtbd3
Ikzf5
Acadsb
Fasn
Txnip
Ifrd2
Ilkap
Zfp213
H3c7
H2bc9
Nup107
Rab6a
Arl8b
Nsun6
Arl5b
Ppox
Rsrp1
Arih1
Dohh
Brpf1
Gtf2b
Sbk1
Rbpj
Rexo1
Tomt
Lamtor1
Mageb3
Ctdspl2
Fitm2
Mapk14
Cfap298
Pa2g4
Zxdc
Zfpl1
Cdca5
Phb2
Emg1
Nupl1
Rhbdd3
Ewsr1
Gpatch8
Jmjd1c
Cabyr
Utp15
Ankra2
Tmem176b
Tmem176a
Tubb4b
Eps15
Socs1
Cluh
Tmx3
Cbr2
Eif2s1
Atp6v1d
Csnk1a1
Prkn
Pacrg
Slc2a9
Slc35e2
Prr14l
Prcc
Polr2e
Sugp2
Armc6
Wdr41
Ndufv2
Tnc
Srd5a1
Nsun2
Ubxn1
Rbm8a
Eif4b
Mphosph9
2810006K23Rik
Trip11
Atg14
Ube2n
Serinc3
Ctsl
Arl6ip1
Kmt2d
Zfp12
Atxn2l
Eif4a2
Pitpnb
Harbi1
Atg13
Upf2
Atf4
9930021J03Rik
Gnb2
Usp16
Vdac2
Rb1cc1
Rps27l
Arhgap11a
BC003965
Cdc42se2
Ptp4a1
Zfyve16
Hnrnpa2b1
Cbx3
Kifap3
Pura
Xpo5
Polh
Usp32
Mknk1
Nepro
Phf14
Ndufa4
Mtrex
Dhx29
Clpx
Zfp148
Tmem39a
Tmf1
Sptan1
Txnl4a
Gm16286
Rnf19b
Id4
Hyal2
Itgb1bp1
Cpsf3
Fntb
Zfand5
Rps3
Fbxl14
Nectin3
Uspl1
Marf1
Sqstm1
Rgl2
Ccdc126
Atp5l
2300009A05Rik
Smap1
Trrap
Polr3a
Rab35
Mrpl30
Mitd1
Poldip3
Psmb2
Notch2
U2surp
Pcmtd1
Gtf2e2
Cep120
Rfesd
Herpud2
Mideas
Dnajb1
Gatb
Zmiz1
Sap18b
Sap18
Osbpl9
Yeats4
Calm3
Zfp628
Ier3
Ints10
Epg5
Kntc1
Stat3
Rwdd1
Tmem104
Nat9
Dbi
3110009E18Rik
Btbd7
Tjap1
Tomm40
Galk2
Cops2
Thumpd3
Rad23b
Tsc22d1
Npm1
Fdxacb1
1110032A03Rik
Atxn7l2
Arf4
Rps28
Ercc6l2
Phlda1
Sik2
Xpc
Lsm3
Hspa5
Ttc32
Setd3
Ccnk
Prepl
Camkmt
Macrod2
Hif1a
Scrn3
Cir1
Srsf2
Mfsd11
Srr
Smg6
Gmcl1
Orc4
Mbd5
Atr
1700065D16Rik
H2ac21
H2ac20
H2bc21
Slc18a1
Atp6v1b2
Yars
S100pbp
Ulk2
Slc9a1
Mylip
Psmb6
Kmt2e
Zc3h18
Golga7
Nbeal1
Tcf4
Sipa1l3
Zfp963
Blnk
Fam53c
Ccdc85c
Bod1l
Tmem19
Ift22
Napg
Ufm1
Olfr536
Sub1
Rps17
Naa35
Tex2
Tnrc18
Tdp2
Acot13
Tspan14
Otud1
Tank
Cop1
Sspn
Nup50
Slc20a1
Adam17
Gls
Atg10
Utp3
Ubald1
Mycbp
Psmd1
Cdk20
Herc4
Uchl5
Ro60
Ranbp2
Nop58
Odc1
Kdelr2
Tmem53
Armh1
Ss18
Klf6
Coa8
Bag5
Tmem250-ps
Ythdf2
Rhot1
Cmc2
Cenpn
Mtmr6
Nfkbiz
Rps20
Ptcd3
Polr1a
Tmed2
Sgo1
Psma2
Mrpl32
Rps15a
Pdk4
Hdlbp
Rps23
Mfsd8
Myl6b
Srsf5
Ppil4
Palld
Rita1
Ddx54
Opa1
C87436
H4c14
Aebp2
Jak3
Abcf2
Rbx1
Ccnt1
Ascc3
Mrpl12
Eif2s3x
Ppp4r3a
Oxnad1
Dph3
Naca
BC005537
Glt28d2
Cfap97
Suclg1
Sh3gl1
Ppp1ccb
Ppp1cc
Ccnl1
Gbe1
Mccc1
Vps8
Rmnd5a
Srsf6
Btg2
Icam1
Pias4
Pomt1
Rpl24
Fastk
Raly
Wdr92
Pno1
Senp8
Myo9a
Hspa8
Eif5a
Gorab
Cited2
Gtf2f2
Nfkbia
Tor1aip2
Tor1aip1
Cd74
Cdkn2c
Tada3
Arpc4
Wwox
Tmem123
Ice1
Rmnd1
Armt1
Tnrc6c
Tomm20
Erc1
Ehmt1
Cbwd1
Rpl21
Nup153
Azin1
Casp4
Cog6
Mcoln1
Mycbp2
Gpr19
Pnrc1
Dclre1b
Ap4b1
H4c4
Spg7
H4c9
Taf15
Atg16l1
Mrpl45
Rpl22l1
Ctbp1
Cpeb2
Ddx20
Tars
Tmsb10
Tmem186
Pmm2
Por
Slc25a32
Dcaf13
Gcdh
Nfyc
Kdm4c
Kdm5a
Eif3a
Tapt1
Rbbp6
Fam227b
Dtwd1
Epc1
Zfp94
Efcab2
Srsf3
Gadd45g
Nup54
Etf1
Gss
Abhd18
Commd1
Snrnp70
Fam168a
Rsbn1
Upf1
Mcl1
Krcc1
Rpl35a
Iqcg
Slc30a5
Supv3l1
Calr
Bcl9l
Erlin2
Sec61a1
Ralgapb
Flcn
Snx15
Sepsecs
Rps27rt
Rps27
Rab13
Rhbdf1
Kat6a
Frat2
Zfand3
Adss
Cc2d1b
Hmgxb3
Crtc2
Suds3
Atg101
Myl12a
Rps3a1
Ppp3cb
Usp8
Rabggta
Fam177a2
Fam177a
Man1a
Sirt1
Tpm1
Zfp438
Mrto4
Emc1
Hps5
Gtf2h1
Txndc11
Parp2
Tbc1d2
Msl2
Tmx1
Hilpda
Ifi204
Bcl6
Pip4p1
Fra10ac1
Puf60
Serac1
Gtf2h5
Rab7
Tmem219
Noct
Armc1
Usp1
Dusp6
Arid3a
Baiap2
Slc25a51
Gins1
Crtc1
Rps7
Clcn4
Actb
Rabl6
Igsf9
Uros
Bccip
Rfxank
Gm45929
Borcs8
Abcf3
Tbc1d14
Usp48
Cdca4
Riok2
Smc4
Ift80
Tspear
Wbp4
Elf1
Eif3d
Agps
Gm5148
Csnk1g2
Prpf38a
Orc1
Clp1
Ddi2
Pik3r3
Lamp1
Lsm4
Avl9
Wdr18
Tnfaip1
Ift20
Pyroxd1
Bag6
Wsb1
Etfrf1
Casc1
Zfp719
Atl2
Mbd1
Ppp1r10
Mrps18b
Ppp2r5a
Them4
Rad9b
Homer1
Mrpl11
Gm4925
Arl1
Aftph
Trib1
Mtmr2
Psmd12
Eda2r
Spty2d1
Gramd1b
AW549877
Ppp1r37
Sfswap
Ddb1
Lrr1
Rpp14
Htd2
Sidt2
Atg12
Ap3s1
Fubp1
Dnajb4
Zzz3
Lins1
Mff
Serp1
Eif2a
Adam10
Zfp511
Tubgcp2
Mthfsl
Tbc1d15
Ptges3
Isy1
Xrcc1
Pinlyp
Ccng2
Tti2
Capn10
Mtmr10
Oard1
Nfya
Gid8
Dido1
Pten
Raf1
Eps15l1
Trmt44
Tubd1
Rps6kb1
Bcas2
Tsc22d2
BC049762
Pold3
Clk4
Akirin2
D5Ertd579e
Aldh4a1
Resf1
Ap1s1
Slu7
Cipc
Timeless
Zfp119a
Fnbp4
Glcci1
Nrbp2
Asxl2
Pdcd6ip
Ubxn4
Tmem29
Hsp90ab1
Mfsd4b4
Sec24c
Terf2
Sdc4
Styxl1
Mdh2
Kmt2b
Utp25
Calcrl
Ndst2
Chmp5
Bag1
Pde12
Map3k14
Myo9b
Haus8
Slc7a6os
Prmt7
Mrpl48
Mettl1
Eef1akmt3
Trim37
Mafa
Smc2
Fzd5
Heatr5a
Echdc1
Jak1
Lamtor5
H2-Q8
H2-Q6
Tmem260
Rab11b
Ints6
Oser1
Dennd4b
Cst3
Fchsd2
Ube2d3
Zbtb22
Ipo9
Trir
Atrn
Rfx3
Katna1
Lsg1
Hspa1b
Cct4
Socs3
Dnajc10
Mbtps1
Thg1l
Serpinb6a
Ripk1
Copg1
Rnf149
Zbed4
Sar1a