ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028798 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◣ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Cldn34d
Rtn3
Gnai2
Inip
Flcn
Uqcrh
Lrrc41
Tjp3
Pip5k1c
Fam53c
Cln8
Gipc1
Aldh4a1
T2
Eed
Arntl
Cmc2
Cenpn
Phrf1
Cdk12
Nphp4
Kcnab2
Uchl3
Rita1
Ddx54
Ptcd3
Polr1a
Ptov1
Cenpe
Eif3b
Tcp11l2
Lrpprc
Nmral1
Med30
Rpl19
Cacnb1
Ephb2
Calm3
Taf15
Septin11
Madd
Wdr77
Atp5pb
Trir
Get3
Denr
Cnot6
Cwc27
Mrps11
Mrpl46
Tardbp
Por
Cdiptos
Cdipt
Arid4a
Samd4b
Gmfg
Robo1
Ppp1r13l
Cd3eap
Tbck
Aimp1
Rab28
Mlst8
Tst
Mpst
BC005537
Top2a
C1d
Sh3glb2
Miga2
Bzw2
Ankmy2
Nr6a1
Tada3
Arpc4
Lsg1
Prkdc
Mcm4
Aspn
Rpl22
Hyal2
Gnb2
Myh14
Gpsm1
Dgat2
Eif2ak3
Sash1
Pfdn4
Ift27
Arrdc4
Prkci
Ttll7
Slbp
Cdca7l
Galnt10
Ott
Gm15107
Gm15085
Mia2
Pkia
Tigd5
Eef1d
Tbc1d17
Akt1s1
Asah1
Qrich1
Limch1
Fam227a
Cby1
Smc3
Zfp821
Mapk8ip1
Tmem260
Uros
Bccip
Camta1
Utp18
Mbtd1
Zfp383
Zfp27
Ndufb1
Cpsf2
Apobec2
Psip1
Pawr
Rnasek
0610010K14Rik
Zfp687
Git2
Ankrd13a
A330070K13Rik
Fus
Cnot11
Paxip1
Atg12
Ap3s1
Dpp9
Cdt1
Sos2
Wasf1
Cdc40
Sema4d
Otogl
Sharpin
Maf1
Gm35339
Abhd2
Rhbdd3
Ewsr1
Mblac1
Rarg
Srpk2
Fsbp
Slc41a3
Ankrd54
Ptcd2
Mrps27
Frat2
Tmem198b
Dnajc14
Krt80
Nol6
Pabpc4
Uchl1
Cct5
Atpsckmt
Prrt1
Ppt2
Hrc
Frat1
Hap1
Oxr1
Cryge
Fgd4
Selenow
Zswim4
Psma8
Mat2a
Slc36a4
Dohh
Mbnl2
Cibar2
Rmnd5a
Atg101
Noct
Atrnl1
Pknox1
Gripap1
Iqch
Aagab
Atp8a1
Pik3r3
Mgrn1
Raly
Tspan4
Polr2l
Jun
Junb
Rlim
Hs3st3a1
Pias2
Prr19
Pafah1b3
Them6
Ces2a
Myo18a
Ilf2
Uqcrq
Gdf9
Tcerg1
Smg8
Tll1
Cnot1
Hexim1
Fanci
Tnrc6b
Aicda
Dut
Zfp526
Dedd2
Hdac2
Oxgr1
Prdm10
Dnmt1
Uba1
Lrch4
Fbxo24
Bzw1
6030468B19Rik
Sele
Paip2b
Map3k7
Ptdss1
Mterf3
Rel
Atp5b
Map7d1
Cfap77
Ttf1
Mis12
Derl2
Inava
Papss2
Spsb3
Nubp2
Trip10
Gpr108
Nectin3
Kctd14
Siah3
Stip1
Ube2c
Ltbp4
Kctd2
Atp5h
Cd164
Mtch2
Cdca8
9930104L06Rik
Hnrnpc
Rtkn
Cdc25c
Slc35g3
Polr2a
Sp2
Pcdhgc3
Pcdhgc4
Dnm2
Rbbp9
Zfp94
Avpi1
Traf2
Tepsin
Ndufaf8
Eif4a3
Ppm1l
Ly6g6f
Abhd16a
Rbm39
Arhgef1
Papln
H2-DMa
Brd2
Cenpp
Wasl
Xrcc1
Pinlyp
Slc35e3
Myl12a
Sspn
Smim4
Nt5dc2
Wrap53
Trp53
Nasp
Sdcbp
Mynn
Actrt3
Timeless
Ccp110
Fchsd2
Nfe2l3
Fam53b
Tpbg
Sp1
Fos
Flad1
Rnf5
Agpat1
Col9a1
Cd69
Rfx1
Cap1
Lamp5
Fbln2
Smim38
Mfsd13b
Cdr2
Ccdc33
Mtmr14
Srxn1
Ttll10
Rhobtb3
Sgsm3
Xirp1
Muc3
Zpbp
Spata48
Krtap6-1
Cic
Akirin1
Katnb1
Cwc22
Paf1
Med29
Zfp869
Oat
Scamp5
Ccdc106
Smchd1
Zfp580
Hcn1
Rab11b
Krcc1
Fxyd3
Uhrf1bp1
Fbxo33
Prkaca
Rusc2
Slc39a3
Ska2
Prr11
Atp6v0c
Ensa
Psmd5
Cutal
Sel1l
Ccdc85c
Duxbl3
Duxbl2
Duxbl1
Alox5ap
Sod2
Dmxl1
Calml3
Fbxl14
Dbp
Car11
Gm7361
Nudt2
Kif24
Tacc1
Rps19
Tns2
Gzmm
Frem3
Srgap2
Fam72a
Spdl1
Lpar3
H2-T9
H2-T22
Gm6034
Kiss1
Mvk
Mmab
Lsm6
Rassf5
Cfap73
Olfr1419
Zfp219
Tmem253
Nlk
Nek6
Khsrp
Rps7
Tmem94
Anp32e
Pramel51
Rnf26
Mtf2
Dot1l
Nfatc2ip
Zfp637
Timm17b
Pqbp1
Ugp2
Atg16l2
Cspp1
Cops5
Smarcal1
Pcsk5
1110004F10Rik
Kctd9
Cdca2
Nfe2
Plekhf2
Usp1
Fam76a
Prickle1
Ccnj
Ss18
Per2
Rbm15
Glcci1
Gm11780
Ptch1
Il17rb
Chdh
Dgcr6
Ttc30b
Golph3l
Relch
Pign
Slc25a20
Cul2
Rap2a
Tmem102
Fgf11
Chrnb1
Rnpc3
Slit3
Ppm1k
Pnpo
Ss18l2
Abtb2
Wbp1
Ino80b
Xylt1
Arpc1b
Wdr62
Plod2
Acvr1b
Akt2
Zfp608
Mtss2
Tom1
Kmt5c
Hbp1
Myadm
Slc25a25
Naif1
Iqce
Brat1
Fgfrl1
Tppp2
Ndrg2
Inka1
Tmem218
Wasf2
Slc66a2
Prox2
Dlst
Tcf12
Dusp12
Mrps10
Tmprss3
Krt19
Nudcd2
Hmmr
Wipf1
Ift140
Cramp1l
Tctn2
Rnaseh2a
Prdx2
Dhrs3
Zfand3
Maco1
Kcns1
Ccdc187
Meis1
Kdm4a
Ubr3
Med25
Fuz
A930018P22Rik
Hnrnpr
Calcoco1
Ccer1
Fzd2
Pip4k2b
Gpr84
Evi5l
Polg
Magel2
Neo1
Sema3b
Ssrp1
P2rx3
Ezh2
Trim8
Pmpcb
Erbb3
3110082I17Rik
Tcf19
Cchcr1
Ivd
Arap1
Olfr812
Mag
Cct8l1
Ddx41
Nacc2
Immp1l
Elp4
Grm1
Rpn2
Mroh8
Tle3
Copz1
Bsdc1
Cdc23
Fhad1
Crtap
Dus1l
Spag9
Ctps
Ap2m1
Mycbpap
Stau2
Scnn1g
Zfp607b
Ireb2
Znhit3
Psma2
Mrpl32
Scyl3
Rp1
Map3k3
Snrpd3
Gucd1
Rspry1
Psme3ip1
Kmt2a
Ubald2
Zfp52
Hspa4
Mapk14
Slc26a8
Sgms1
Dap3
Syt8
Speer4d
Zbtb3
Polr2g
Pxmp4
Klhl26
Scamp2
Osbpl5
Nckap5
Maoa
Prkcb
Ankrd6
Zfp599
Fam24b
Ier5
Supt5
Prickle2
Dcc
G3bp1
Slc35e2
Hdac1
Elmo2
Tmx2
Med19
Tprn
Igsf8
Cep135
Tedc1
Crip1
Lars
Isoc2b
Ngdn
Spire1
Arl14epl
Anln
9530077C05Rik
Akap11
Zfp574
Grik5
Ankhd1
Zdhhc5
Spag8
Hint2
Erg
Lum
Tmigd1
Hexim2
Ppp6r3
Chd6
Wnt2b
Armc1
Wnt10b
Folr2
Card19
H2-DMb1
Lyzl1
Dhrs2
Adamts19
Srf
Arf4
Sptlc2
Prmt1
Shisa5
Lyrm7
Arhgef3
Col11a2
Ube2b
Cdkl3
Nvl
Sarnp
Ormdl2
C330007P06Rik
Gm3667
Rraga
Faap24
Lca5
Cemip
Kat6b
Tbcb
Polr2i
Ovol3
Ak1
Sorbs2
Nedd4
Phldb1
Pan2
Wdr27
1600012H06Rik
Poc5
Yipf2
Timm29
Slc14a1
Siah1b
Ankfy1
Akap7
Nbdy
Diaph1
Arl2
Rnf181
Osbp
Stat3
Ints4
Xab2
Pet100
Pcp2
Apc2
Lratd1
Zfp660
Rbm25
Cct8
Fdft1
Stt3a
Rcl1
Gpsm2
Cdc45
Heatr1
Gtpbp3
Ano8
Gm17019
Trim45
Fdxr
Mxd4
Dcaf15
Gjc3
Speer4e
Trappc11
Rwdd4a
Mterf2
Psat1
Rbbp6
Atf7
Msantd4
Cemip2
Cd1d1
Ctla4
Wwox
Dapk3
Rpl27
Gtf2b
Got1
Tars
Ticrr
P4hb
Mon1b
Hip1
Tomm40
Gcdh
Timm10
Smtnl1
Veph1
Lrrc71
Pum3
Glrx5
Srp68
Ric8b
Fut4
Mfsd8
Rpp38
Acbd7
Traf7
Cthrc1
Arhgap11a
Psmb3
Pcgf2
Nmt1
Mospd3
Chgb
Npm1
Ppm1b
Zfp317
Arf2
Islr
Pin1
Ap2a1
Tex14
Myd88
Acaa1a
Zfyve21
Xrcc3
Chmp3
Fam76b
Cep57
Abhd18
Rab40c
Mest
Limd1
Alyref2
Zbtb40
Kpna1
Tmem125
Il31ra
Abhd6
Jag2
Olfr806
Cenpu
Ndst2
Eapp
Bcl6
Itgb4
Cbr3
Zfp143
Vmn2r102
Cltc
Ajuba
Fam20b
Rps27l
Rps29
Sec14l1
Xpc
Lsm3
Pa2g4
Hjurp
A730008H23Rik
Proser1
Nhlrc3
Smg9
Lrrc56
Hras
Znhit1
Plod3
Rab5b
Tmem41b
Taf12
Nemf
Tmem250-ps
Gm5165
Phlda3
H3c15
H3c14
H2ac19
H2ac18
Rab33b
Tjp2
Gtf2a1
Fam227b
Dtwd1
Dnajc16
Casp9
Mmp15
Gm3448
Gm3417
Susd6
Pole3
Alad
4933430I17Rik
Yif1b
Trappc9
Ctnnb1
Nme1
Get4
Ubr4
Slc35b1
Ap3m2
Bcl9l
Uvssa
Ccser2
Chmp7
Slc14a2
Zxdc
Ints10
Cfap20
Slc30a5
Mrpl21
Ighmbp2
Htra2
Dqx1
Aup1
Frmd6
Nt5c3
9030025P20Rik
Bbs2
1700016H13Rik
Fkbp3
Fancm
Tcte3
Ermard
Styxl1
Mdh2
Mapkapk5
Gatad2a
Taf9
Rad17
Ak6
Nuf2
Isy1
Utp3
Angptl4
Smim17
Tob1
Spty2d1
Lfng
Birc2
Chordc1
Tpt1
Wdfy2
Plekha1
Magi1
Get1
Mrpl30
Mitd1
Rgs3
Tecpr1
Gfra4
Fnbp1
Zscan25
Gm3435
Kremen1
Sncg
Mmrn2
Tmem107
Gramd1b
Clic4
Tubb4b
Fam149b
Ecd
Ttc14
Tcf3
Sfi1
Txnip
Frmd4b
Cnot3
Rbbp8
Limk2
Oprd1
Faf1
Esyt2
Med6
Niban2
Snrpc
Psmd3
Nabp1
Tfg
Palb2
Dctn5
H4c3
H1f6
Opa1
Actr3
Rps12
Tsga10
Kpnb1
Sema3f
Usp20
Kifap3
BC005624
Gopc
Dffb
Cep104
Calm1
Trim41
Tmem262
Hes6
Gtf2f1
Plekhb1
Wdr92
Pno1
Fbxw7
Zfp24
Stk32c
Rab4b
Mia
H3f3b
Aard
Nup107
Dgat1
Ttc41
Hsp90b1
Cactin
Prpf40a
Arl6ip6
Ccnt2
Klhl21
Rps3a1
Plekha7
Rer1
Morn1
Crtc1
Srm
Iqcn
AW549877
Zcchc14
Eps15
Fitm2
Sigmar1
Egr2
Lamp1
Aig1
Zfp654
Cggbp1
Cyth1
Nup133
Spdye4b
Rbak
Bricd5
Gpn3
Fam216a
Grb2
Spink5
Bmf
Vta1
Evpl
2900026A02Rik
Ist1
Lig4
Abhd13
Pop7
Pip4p1
Baz2a
Kpna3
Fstl3
Sde2
Tmco3
Rlbp1
Dcun1d2
Gale
Rgl2
Nfat5
Abcf2
Ifna13
Kansl3
Fer1l5
Arhgef4
Supv3l1
Cipc
Ltbp1
Zfp385b
Glce
Bod1l
Mef2a
Gpatch8
Rpl3
Ube2d3
Mideas
Ttll5
Erg28
Eif4e
Rasip1