ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15046886 | MEF
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◣ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Aard
Oprd1
Gm3739
Galnt9
Rtn2
Ppm1n
Dab1
Cldn34d
Adamts19
Pde3a
Mmp15
Galr3
Gm5165
Adcyap1r1
Plvap
Hr
Dpysl4
Lrrc3b
Ccdc3
Tpbgl
C2cd4b
Prkcz
Rftn1
Arrdc4
Yif1b
Plekha7
Kcnk6
P2ry1
Ampd3
Bmp2
Gm2237
Nt5c2
Ina
Adcy8
Celsr1
Mad2l2
Draxin
Prtg
Bmp7
Cnnm3
Adamts15
Ccdc85c
Igfbpl1
Ier5l
A830018L16Rik
Lrrn4
Reln
Ascl2
Srm
Tjp3
Pip5k1c
Plxnd1
Cabp7
Bhlha9
Adcy9
Kcnk12
Cnnm1
Ubd
Olfr94
Ret
Synm
Efcc1
Pm20d2
Insyn1
St6galnac2
1700001C19Rik
Prkcq
G3bp1
Sharpin
Maf1
Gm35339
Sema3f
Gxylt2
Gjd3
Gatad2a
Gm3752
Syt10
Homer2
Emb
Gcnt1
Gm3411
C2cd4a
Rapgef5
Fgfbp3
Trnp1
Kcnq4
Kcns2
Gda
Sox18
Fam189a1
Shisa9
Mroh5
Gm6569
Adcy3
Slc22a3
Gfra4
Kbtbd13
H3c15
H3c14
H2ac19
H2ac18
Btbd11
Pakap
Prima1
Fdft1
Pax4
Egfem1
Zfp143
Plag1
Chchd7
Kctd1
Htra4
Ak5
Tmem179
Fnbp1
Gipc1
Usp13
Dact2
Jpt2
Tarbp1
Nkx1-2
Rhbdl3
Oxr1
Kcnh1
Zmiz1
Tpcn1
Iqcd
Zfyve28
Cfap99
Dock8
Igdcc3
Nkd2
Rnf165
Olig1
Igfbp5
Wnt3a
Gbx2
Fam53c
Mlxipl
Osbp
Fbn2
Irx4
Calm3
Zbtb16
Slit3
Kctd12
Prkaca
Dipk1c
Kmt2a
Sall4
Ptger3
Foxi3
Slc35f3
Adamts2
Nrg2
Spsb3
Nubp2
Slc24a2
Stum
Tmem132b
Car15
Fgfr1
Shisa8
Adrb1
Gm5796
Dusp2
Astl
Gm10406
Wnt3
Egr2
Ffar4
Tmem200c
Ap2a1
Lrrn2
Rerg
Unc5a
Car7
Kcnip3
Ephb1
Cdh4
Xpc
Lsm3
Eya2
Rgs9bp
Ankrd27
Ntsr2
Col27a1
Qrfpr
B3gat1
Rasef
Gm30191
Grrp1
Phpt1
Ajm1
Gm38538
Pcdh1
Jph3
Nefl
Gabra5
B3gnt7
Atp1a3
Slc6a17
Shc2
Adcy1
Enox1
Hs3st4
Misp3
Unc5b
Paip2b
Sorcs1
Dlk1
Scn1b
Tepsin
Ndufaf8
Tppp
Galnt13
Ppp2r5a
Stox1
St6gal2
Tcf19
Cchcr1
Gse1
Kcnma1
Fam43b
Zfp869
Pax6
Rasgrf2
Stip1
Ttc9
Ankrd54
Fzd10
Ednrb
Gm3696
N4bp2l1
B4galt6
Gldn
Gm3667
Dynlt1b
Foxe3
Col19a1
Ankrd34b
Cnot3
Rpn2
Mroh8
Kcnb2
Vangl1
Sp2
Gja3
Cby3
Tmie
Als2cl
Tmem158
Tbl1xr1
Atp1b1
Hmgn1
Lonrf2
Dhh
Traf2
Aktip
Wnt4
Flt3
Gsg1l
Reep1
Shisa2
Adamtsl3
Spint1
Abhd2
Dmrt2
Tmem121
Kcnq3
Qrfprl
Gng13
Dach1
Mafa
Adgrb1
Grid1
Insm2
Dock10
Samd4b
Gmfg
Irx2
Ush1g
Otop2
S1pr5
Hyou1
Nsg1
Atoh8
Pkp1
Adrb3
Fam78b
Ngf
Lrrc75b
Ggt1
Cul2
Cacnb2
Slc24a4
Acan
Gdf7
Aplp2
Lysmd2
Aph1c
Hhipl1
Adora1
Rrbp1
Ky
1190005I06Rik
Rab11fip4
Htra3
Gas1
Arid3c
Kndc1
Zfp385b
Trappc6a
Bloc1s3
Ebf4
Prex2
Efhd1
Zfp654
Cggbp1
Lrrc10b
Gm3500
Colgalt2
Kank4
Smoc2
Fut9
Sost
2810459M11Rik
Chst3
Ube2c
Gm3636
Cacna2d2
St8sia1
Pde1b
Xylt1
Grin3b
Ube2b
Cdkl3
C130074G19Rik
Onecut3
Skor1
Kit
Igfbp3
Rnf144b
Sema5b
Fam163b
Lurap1l
Pmp22
Tmem30b
Zbtb7c
Kank1
Tbx20
Islr2
Atp5g1
Gpr27
Wnt5b
Sdk2
Kcns1
Fzd2
Prph
Pym1
Dgka
Pygo1
Pdlim1
Vax1
Cnnm2
Rnf125
Ctnnd2
Drd5
Rims4
Olig2
Gpr84
Svep1
Plxnc1
Fbln7
Dlgap2
H1f10
Ghsr
Syndig1
Arid4a
Atp8b1
Ttc41
Hsp90b1
Kcna7
Tbx21
Pdik1l
Nol4l
Ripply2
Insyn2a
Zdhhc20
Sstr1
Prdm13
Cnr1
Cwc27
Clip4
Pif1
Dgcr8
Wscd1
Wnt1
Col13a1
Sertm1
Klf10
Tnfrsf21
Tgfa
Neurod2
Fyco1
Galnt16
Npas1
Nfatc2ip
Recql
Golt1b
Pdzrn3
Trim71
Abtb2
Deptor
A930017K11Rik
Rap1gap2
Tmem178
Itga4
Lama1
Sap130
Cftr
Susd1
Ensa
Vps26a
Dennd5b
Cdkn3
Cpm
Camk2b
Man1c1
Ptprt
Ncapd2
Mrpl51
Smtnl2
Tfdp1
Gm20346
Anp32a
Helt
Ppic
Nmbr
Htr1b
Hmx1
Arpp21
Ska2
Prr11
Sun1
Slc22a23
Ppp2r2c
Mvk
Mmab
Gm51425
Mxd4
Tmem210
Lrrc26
Slc43a1
Sptbn2
Bves
Lrrfip1
Bhlhe23
Map3k5
Mmd
Bmper
Zfp853
Ift27
Ankhd1
Cpsf1
Mei1
Chadl
Soga1
Wnt7a
Prtn3
Plppr3
Kl
Mxd1
Pla2g6
Snrpd2
Qpctl
Stx16
Efnb2
Dpf3
Rassf10
Hrc
Cbln4
Cdca7l
Setx
Nav2
Grm6
Tmem215
Eva1a
Kcnq1
H60b
Flcn
Nptxr
Rfx2
Kpnb1
Hsd11b2
Zfp960
Nemp1
Fam83d
Ccdc177
Gabbr2
Ubald2
Maea
Npc2
Isca2
Trim47
Tmtc4
Pde8b
Egr4
Nt5e
Cgas
Plxna2
Calhm6
Ap3m2
Rps6ka5
Baiap2
Far1
Rai1
Wnt2
Tnrc6b
Pitpnm1
Cdk2ap2
Klf11
Ascl4
Slc30a10
C2cd2
Fbrsl1
Kcnk15
Wasf1
Cdc40
Vav3
Plekhd1
P2rx5
Ptbp1
Mapt
Sst
Ube2ql1
Lhx3
Adamts18
Vps26b
Ncapd3
Pou3f1
Iqsec3
Dsg2
Creb3l2
Mreg
Slbp
Prdm10
Slc2a13
Ednra
Clec2l
Fgf3
Gimap5
Gimap1
Clmp
Kbtbd11
Ppm1b
Sertad2
Spry1
Proser2
E2f1
Dtna
Kcnq2
Plcb1
Rcor2
Klhl40
Herc2
Dcaf11
Pcbp3
Fcgr3
Asap1
Panx1
Rgs7bp
Dll1
Neurod6
Dlgap4
Rtn4rl1
Dph1
Lingo1
Tril
Gm3488
Mex3c
Spsb4
Gm10499
Limk1
1110032F04Rik
Rab22a
Ebf1
Megf11
C1ql1
Sfrp5
Atoh7
Kdm4b
Atxn3
Zbtb46
Myo1b
Aldh1a3
Tjp2
Nrp1
Htr6
Hdac2
Fam163a
Egr3
Ltbp4
Astn2
Hcn4
Col15a1
Nkpd1
Usp12
Atg9b
Ptov1
Gpr88
Adra2c
Wasf2
Dynll1
Mpv17l
Myh9
Zfand1
Akap8l
Mtch1
Gm3383
Lingo2
Ppp1r26
Rnf207
Pou3f2
Stat3
Rab4b
Mia
Cebpd
Abcc8
Gdnf
Fam76a
Dnpep
Chn2
Pdzd2
Kcnj12
Sgk3
Cspg5
Psip1
Ptpn14
Tfcp2
Iffo2
Kcnk3
Rab31
Nkx1-1
Rax
Hes3
Acot3
Nlk
Grk6
Cep192
Btbd17
Alx4
Hnrnpc
Tom1
Olfm1
Kcnk10
Pard3
Cntn5
Zfyve21
Xrcc3
Adamts9
Zfp800
Dact1
Slc26a4
Efna2
Phyhipl
Atp10a
Rnf144a
Fam43a
Ap1b1
Nefh
Nes
Foxb1
Tuft1
Slc16a14
Arsi
Lingo3
Man2a1
Mme
Eya1
Lamb1
Wnt9b
Lsg1
Trim45
Dok7
Maneal
Klf14
Cyp26a1
Prrt4
Sp1
Mtch2
Sorbs1
Shisal1
Lmo1
D430041D05Rik
Dnajb1
Per1
Srpr
Foxred1
Lbr
Ebag9
Crhr2
Tfap2c
Bcl10
Wnk2
Piezo2
Megf6
Foxf1
Gfra2
Sash1
Top2a
Nmral1
Ticrr
Nkx3-2
Rbm27
Endod1
Prmt8
Kcnn2
Ica1l
Syt12
Cck
Slc47a1
Msx3
Cd34
Rnf5
Agpat1
Prkg2
Svbp
Gpr25
Map6d1
Ndst2
Sema4d
Prmt1
Atxn7l3
Lypd1
Alkal2
Kmt5a
Sema6d
Tmem51
Grin2c
Ift140
Cramp1l
Pdzrn4
Rpusd1
Chtf18
Paqr9
Fam76b
Cep57
Tpst2
Septin11
Tef
Slc4a11
Hcn2
Tafa5
Ism1
Pou3f3
Sv2c
Amz2
Nucb2
Fem1a
Popdc3
Rbms1
Klhl23
Ece2
Cnot1
Frmd4b
Pkd1
Tet2
St8sia2
Mtmr14
Mrpl21
Ighmbp2
Ggct
Clmn
Lrif1
Gpr155
Ss18
Nabp1
Cap1
Dhodh
Ivd
Sstr2
Adcy2
Pced1b
Amigo2
Bhlhe22
Lhx2
She
Myh10
Zbtb5
Sh3bp5
Mfhas1
Adamts8
Tle1
Msc
Dmrta1
C2cd4d
Pdgfb
Myrip
Ppm1l
Lrch4
Fbxo24
Dffb
Cep104
Pias4
Tfap2a
Cxxc5
Shroom3
Abcc9
Shh
Csmd1
Hgs
Arl16
Tpmt
Kdm1b
Cdk5rap3
Tacstd2
Pwwp3a
Polr3h
Cited1
Jakmip3
Slc1a2
Gsx1
Pip4p1
Rab40c
Fzd5
Mrpl38
Rmnd5a
Slc35e2
Frat2
Fzr1
Dipk2a
Ryr3
Grm5
Il1rapl2
Cyp2u1
Pdxp
Qdpr
Clrn2
Ryr2
Fmnl1
Kcnc1
Bcl6
Fmnl3
Mboat2
Ntn1
Tom1l2
Drc3
Acvr2b
Slc35f2
Kcnc4
Adap1
Cenpu
Rab11b
Stk32c
Ccne1
Wscd2
Ksr2
Slc47a2
Rab5b
Insig1
Gpc1
Twist2
Tcf15
Camk2n1
Rusc2
Cyld
Sqle
Ubr5
Rtn4r
Vgll2
Ppp1r16b
Arf2
Sfxn2
Arl3
Tmem260
G3bp2
Uso1
Natd1
Fgfr2
Cnpy1
Col18a1
Tmtc1
B4galnt3
Atp2b3
Nell2
Camta1
Usp20
BC005624
Katnb1
Gins2
Ctnnbip1
Dock9
Isl1
Dusp1
Crhr1
Akt2
Glrx5
Tmem131l
Foxk2
Hnrnpl
Flt4
Esyt3
Grin3a
Eps15
Colgalt1
Ranbp3
Igsf21
Reep6
Pcsk4
Synpr
Rbx1
Dcun1d4
Slc11a2
Cdh7
Nup93
Acap2
Vegfa
Strip2
Git2
Ankrd13a
Arntl
Zc3h18
Spag7
Cnpy3
Capzb
Spsb1
Hs3st3b1
En2
Clic4
Nfatc1
Dact3
Camsap1
Sulf2
Rras2
Nalcn
Ngfr
Six3
Chst12
Ptges2
Nupr1l
Prodh
Raver2
Tmem218
Zdhhc12
Pgbd5
Ube2d1
Chd5
Atg101
Limch1
Ltbp1
Spns2
Sstr4
3110082I17Rik
Actn1
Mprip
Prpf40b
Chaf1b
Htr1d
Stag1
Tedc1
Crip1
Ap3d1
Dop1b
Stxbp6
Rtn1
Marchf11
Plpp4
Emilin3
Adgre5
Ngdn
Oaz1
Bsdc1
Ciart
Hnrnpul1
Six1
Cdca7
Dlx1
Apcdd1
Igf2
Gm2897
Sh3gl3
Sox1
Cep85
Espn
Thop1
Gnaz
Atp1b2
Notum
Grk3
Adam22
Mgat5b
Abcb9
Rpp25
Dll3
Chmp5
Bag1
Avpi1
Nebl
Nkain1