ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4554102 | 3T3-L1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◣ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Cldn34d
Kmt2a
Slc39a10
Nup107
Denr
Dagla
Hnrnpa2b1
Cbx3
Haspin
Cenpu
Ddx17
Aldh18a1
Wwox
Gpr137
Bad
Baz2a
Cwc22
Speer4e
Zfp646
Zfp668
Snx12
Qrich1
Tmem125
Kansl3
Fer1l5
Cdk12
Ints10
Psmd5
Cutal
Slc25a25
Naif1
Zfp523
Styxl1
Mdh2
Vmn1r2
Fut10
Atg101
Eapp
Polq
Afg3l1
Ube2d3
Cipc
Rbm39
Tex14
Ncbp3
Eps15
Spdl1
Atxn7l2
Bzw1
Adgrl1
Gm51573
Mettl18
BC055324
Eif4a3
Mapk14
Slc26a8
Speer4d
Pradc1
Cct7
Stxbp4
Cox11
Zfp41
Nudt3
Arl14ep
Wdr77
Atp5pb
Poldip3
Arf3
Coq9
Ciapin1
Septin7
Rps19
Ube2z
Tcam1
Smarcd2
Ube2i
Zzz3
AW549877
Gm4981
Prpsap1
Hjurp
A730008H23Rik
Epc2
Lamp1
Tab1
H3c15
H3c14
H2ac19
H2ac18
Rnf115
Polr3c
Capn15
Pcbp2
Mob1a
Dnajb4
Fubp1
B4galt7
Gpx8
Rad1
Brix1
Gins3
Trim41
Hspa4
Mrpl12
Mdm2
Gm21190
Proser1
Nhlrc3
Arhgef1
Dffb
Cep104
Zfp142
Bcs1l
Gins2
Mrnip
Hdgf
Yipf4
Fam53c
Cpsf1
Sirt4
4931408C20Rik
Znrd1as
Znrd1
Nfkbiz
Mtf2
Glce
Ift46
Arcn1
Ckap2
Cpsf6
Mcph1
Pfdn5
Gm3448
Gm3417
Cct8
Tcte3
Ermard
Ireb2
Ska2
Prr11
Atf7
Ptcd2
Mrps27
Ect2
Slc25a4
Tardbp
Smarcd1
Nudt1
Cops4
Eif1ad
Banf1
Adgrf2
Usp3
Tfb2m
Cnst
Mrpl21
Ighmbp2
Ahctf1
Cox7a2
Cnot8
Nsun3
Atf2
Insr
Rpl7l1
Prdm10
Washc1
Xpc
Lsm3
Ttc14
Dnajc7
Nkiras2
Tmem107
Exosc6
Smc2
Hps6
Armh3
Slc35e3
Yod1
Pfkfb2
Rps28
Ppil1
BC004004
Sgms1
Ncbp2
0610012G03Rik
Dck
Kazald1
Ssbp2
Lyz1
Flcn
Sfi1
Eif4enif1
Ddx20
Eif4g2
Dicer1
Mak16
Mettl1
Eef1akmt3
Slc39a9
Erh
Tbpl1
Tomm22
Ddhd2
Taf12
Gm13285
Gm13278
Ifnz
Gm13277
Gm13276
Myef2
Cdkn2aipnl
Arid1a
Gm17019
Cmc2
Cenpn
Rraga
Rubcn
Creld2
Alg12
Fyttd1
Rbm25
Rab33b
Cdc25c
Gtse1
Slc35g3
Polr2a
Rap2b
Phf23
Gabarap
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Rfwd3
Ppm1l
Srp68
Rpn2
Mroh8
Pdia5
Ssrp1
P2rx3
Ankrd17
Smim10l1
Lrpprc
Txnip
Wdr27
1600012H06Rik
Ankfy1
Stat1
Spring1
Rnft2
Lsm5
C1qbp
Myl12a
Lyz2
D16Ertd472e
Ddx42
Ccdc47
Calm3
Brpf1
Smg8
Gtf3c6
Kif20b
Nup35
Rgl2
Tut7
Sod2
Ints13
Fgfr1op2
Gm10354
Kdsr
Micu3
Dbr1
Ndufa5
Asb15
Akr1b3
Tigd5
Eef1d
Zcchc4
H4f16
H2aj
Zfp113
Ska3
Mrpl57
Pxmp2
Pole
Fam133b
Gga1
Scamp1
Gfm1
H2bc6
H1f4
Wdr90
Tln1
Creb3
Fbxl14
Kpna1
Tjp3
Pip5k1c
Iqch
Aagab
Phrf1
T2
Prkdc
Cnot6
Gipc1
Il31ra
Mia2
Cdiptos
Cdipt
Rita1
Por
Ddx54
Slbp
Ccdc85c
Abhd6
Mcm4
Git2
Ankrd13a
Jag2
Olfr806
Taf15
Sspn
Rpl22
Arrdc4
Septin11
Gnai2
Akirin1
Rmnd5a
Dut
Asah1
Sash1
Myh14
Fus
Ndufb1
Cpsf2
Aldh4a1
Prox2
Cln8
Atg12
Ap3s1
Ptov1
Kctd2
Atp5h
Ift27
Tmem260
Hdac2
Arntl
Arid4a
Ndst2
Hyal2
Uchl3
Uqcrh
Lrrc41
Psip1
Ptcd3
Polr1a
Tada3
Arpc4
Dohh
Prkci
Galnt10
Ptdss1
Mterf3
Noct
Madd
Mlst8
Eif3b
Cenpe
Cenpp
Eed
Ss18
Bcl6
BC005537
Dnmt1
Lsg1
Sp2
Atrnl1
Polg
Gnb2
Junb
Ube2b
Cdkl3
Itgb4
Cbr3
H2-DMa
Brd2
Paxip1
Rtn3
Pik3r3
Pknox1
Dlst
Zfp143
G3bp1
Raly
Wasl
Flad1
Mat2a
Fbxo33
Tst
Mpst
Uros
Bccip
Mtmr14
Cwc27
Vmn2r102
Diaph1
Cul2
Cltc
Smc3
Map7d1
Sharpin
Maf1
Gm35339
Robo1
Ajuba
Fam20b
Cd164
Rps27l
Rps29
Oxr1
Dot1l
Trir
Get3
Ankrd54
Ppp1r13l
Sec14l1
Ly6g6f
Abhd16a
Dgat2
Pa2g4
Rfx1
Zfp219
Tmem253
Pkia
Abhd2
Hexim2
Fgd4
Srxn1
Rhbdd3
Ewsr1
Dhrs3
Rpl19
Cacnb1
Slc35e2
Paip2b
Cd3eap
Smg9
Tspan4
Polr2l
Mfsd8
Nphp4
Kcnab2
Dpp9
Hnrnpc
Lrrc56
Hras
Znhit1
Plod3
Cdca7l
Spsb3
Nubp2
Rab5b
Akt2
Mtss2
Selenow
Ap2m1
Eif2ak3
Tmem41b
Zfp869
Calml3
Fanci
Rnasek
Pfdn4
0610010K14Rik
Tepsin
Ndufaf8
Osbp
Nemf
Inka1
Top2a
Atp6v0c
Bzw2
Ankmy2
Tmem250-ps
Gm5165
Phlda3
Cnot1
Atp5b
Per2
Fam227a
Cby1
Cdt1
Igsf8
Sp1
Tjp2
Tom1
Abhd18
Tcp11l2
Gtf2a1
Wasf1
Fam227b
Dtwd1
Cdc40
Frat2
Dnajc16
Casp9
Mmp15
Tbck
Aimp1
Mvk
Mmab
Traf2
Susd6
Pole3
Alad
4933430I17Rik
Slc39a3
Yif1b
Rab11b
Hrc
Cic
Trappc9
Tle3
Ctnnb1
Nme1
Stip1
Get4
Camta1
Ubr4
Slc35b1
Ap3m2
Rnf5
Agpat1
Bcl9l
Zfp821
Uvssa
Ccser2
Mblac1
Tnrc6b
Arl2
Pum3
Ephb2
Nmral1
Ilf2
Chmp7
Atg16l2
Slc14a2
Zxdc
Tbc1d17
Akt1s1
Cfap20
Slc30a5
Htra2
Dqx1
Aup1
Ankhd1
Ube2c
Dnm2
Rbbp6
Frmd6
Stat3
Nt5c3
Them6
Sema3b
9030025P20Rik
Rpl27
Bbs2
1700016H13Rik
Ints4
Prr19
Pafah1b3
Fkbp3
Fancm
Frat1
Mapkapk5
Gatad2a
Limch1
Taf9
Rad17
Ak6
Nuf2
Isy1
Fdft1
Utp3
Angptl4
Tmem218
Myadm
Smim17
Mtch2
Tob1
Spty2d1
Lfng
Birc2
Ddx41
Chordc1
Khsrp
Tpt1
Lrch4
Fbxo24
Wdfy2
Plekha1
Magi1
Get1
Mrpl30
Mitd1
Mapk8ip1
Prkaca
Trip10
Gpr108
Rgs3
Fchsd2
Tecpr1
Mis12
Derl2
Gfra4
Fnbp1
Tcerg1
Zscan25
Gm3435
Kremen1
Sncg
Mmrn2
Rusc2
Mrps11
Mrpl46
Ss18l2
Gramd1b
Hexim1
Cspp1
Cops5
Clic4
Nfatc2ip
Tubb4b
Pip4k2b
Fam149b
Ecd
Glrx5
Tcf3
Rarg
Frmd4b
Cnot3
Cct5
Atpsckmt
Rbbp8
Limk2
Oprd1
Faf1
Tomm40
Esyt2
Med6
Zswim4
Niban2
Smim4
Nt5dc2
Armc1
Snrpc
Zfp687
Psmd3
Nabp1
Tfg
Palb2
Dctn5
Nudt2
Kif24
H4c3
H1f6
Opa1
Actr3
Rps12
Tsga10
Kpnb1
Sema3f
Usp20
Kifap3
BC005624
Gopc
Zfp607b
Calm1
Utp18
Mbtd1
Tmem262
Hes6
Gtf2f1
Plekhb1
Wdr92
Pno1
Fbxw7
Pan2
Zfp24
Stk32c
Zfand3
Rab4b
Mia
Ttll7
H3f3b
Aard
Kmt5c
Dgat1
Ttc41
Hsp90b1
Cactin
Rbbp9
Nectin3
Prpf40a
Arl6ip6
Ccnt2
Klhl21
Rps3a1
Plekha7
Rer1
Morn1
Crtc1
Srm
Iqcn
Zcchc14
Samd4b
Gmfg
Fitm2
Sigmar1
Egr2
Aig1
Ngdn
Zfp654
Cggbp1
Cyth1
Nup133
Zfp526
Dedd2
Spdye4b
Rbak
Inip
Bricd5
Gpn3
Fam216a
Kctd14
Grb2
Spink5
Bmf
Vta1
Evpl
2900026A02Rik
Ist1
Lig4
Abhd13
Pop7
Dapk3
Pip4p1
Pin1
Kpna3
Fstl3
Sde2
Tmco3
Rlbp1
Dcun1d2
Rab28
Gale
Hbp1
Nfat5
Ap2a1
Abcf2
Ifna13
Arhgef4
Nacc2
Supv3l1
Xrcc1
Pinlyp
Ltbp1
Zfp574
Zfp385b
Grik5
Bod1l
Map3k7
Arhgap11a
Poc5
Mef2a
Gpatch8
Rpl3
Ift140
Cramp1l
Mideas
3110082I17Rik
Anln
9530077C05Rik
Ttll5
Erg28
Rel
Dap3
Eif4e
Tmem198b
Dnajc14
Rps7
Rasip1
Malt1
Ubald2
Ier5
Fam3c
Arf2
Uqcrq
Gdf9
Oacyl
Aebp2
Rnf7
Hdac1
Zbtb40
Meis1
Lemd1
Copz1
Chchd2
Mettl25
Dhx32
Ccdc59
Tmcc3
Colgalt1
Rbbp5
Npc2
Isca2
Ensa
Cep63
Anapc13
Hr
Jund
Fdxr
Zfyve21
Xrcc3
Kcnn1
Sacm1l
Slc33a1
Spc25
G6pc2
Rap2a
Ltbp4
P4hb
Xpnpep3
St13
Adnp
Fam83b
Usp12
Zc3h18
Apobec2
Nr6a1
Cfap298
Dcp1a
Yars
S100pbp
Pdcd4
Pias4
Zfpl1
Nlk
Cdca5
Sun1
Sema4d
Slc2a9
Man1b1
Rab6a
Dab1
Ep400
Banp
Galnt9
Fra10ac1
Arl15
Birc5
Cdca8
9930104L06Rik
Wasf2
Usp1
Nrbf2
Pex3
Irf2bp2
Adat2
Ap1g1
Rps6ka5
Nup54
Med23
Cebpa
Rwdd1
Aph1b
Med17
Lsr
Fam187b
Mknk2
Myl12b
Srgap2
Fam72a
Ube2j2
Katnb1
Txnl4b
Kansl2
Dhx38
Rbx1
Pmepa1
Vps26c
Hspa5
Kifc5b
Nomo1
Abcc6
Rtkn
Rab21
Naa35
Kbtbd3
Klf7
Jpt2
Zmynd8
Smarcal1
Ss18l1
Psma7
Nol6
Ttll10
Rab40c
Clptm1
Srd5a1
Nsun2
Mafa
Arid3b
Jun
Vwa1
Smim14
Ube2f
Sh3gl1
Chaf1a
Snrnp200
1810024B03Rik
Ric8b
Timm13
Cirbp
Cbwd1
Cst6
Saysd1
Dhx33
Tubg1
Retreg3
Nlrp10
Eif3f
Stx16
Tex2
Thap12
Ier5l
Farsb
Rin2
Rad23b
Tmed2
Smim38
Mllt11
Gm3739
Cdc42se1
Calr
Vapa
Ppat
Paics
Tacc1
Gm51425
Eif5
Lancl2
Yipf2
Trib1
Timm29
Psmb2
Hdlbp
Ndufs7
Smc6
Gen1
Fem1b
Btbd11
Usp53
Unkl
Ptpn14
Clasp2
BC003965
Adamts19
Ubald1
Tram1
Cdk11b
Sh2d5
Otud6b
Mindy2
Atp10a
Ppp2r5a
Mrpl1
Cacybp
Supt4a
Setd3
Commd1
Ccnk
C1d
Ufl1
Nvl
Mrpl44
Gas1
Hnrnpl
Upf1
Stag1
Prmt1
Stt3a
Lsm14b
Chmp5
Ccdc126
Bag1
Kat6b
Epg5