ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15046887 | MEF
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◣ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Oprd1
Aard
Cldn34d
Galnt9
Rtn2
Ppm1n
Gm3739
Dab1
Plekha7
Mmp15
Pde3a
Arrdc4
Adamts19
Ccdc85c
Galr3
Cnnm3
Ccdc3
Plvap
Dpysl4
Mad2l2
Draxin
Ubd
Olfr94
Adcyap1r1
P2ry1
Yif1b
Kcnk6
Reln
Ampd3
Igfbpl1
Lrrn4
Hr
Sema3f
Cnnm1
Ret
Btbd11
Rftn1
Lrrc3b
Sall4
Bmp7
Htra4
Gm2237
Cabp7
St6galnac2
Ier5l
Prkcz
Synm
Jph3
Nt5c2
Ina
Prkcq
Gm5165
Pm20d2
Bmp2
Srm
C2cd4b
Kcns2
Dock8
H3c15
H3c14
H2ac19
H2ac18
Kcnb2
Mroh5
Gm6569
Ffar4
Adcy8
Gcnt1
Tmem179
Efcc1
Fnbp1
Ephb1
Homer2
Fam189a1
Egr2
Paip2b
Gda
Bhlha9
Prtg
Adcy9
Rapgef5
Tpcn1
Iqcd
Ascl2
Pakap
Sox18
Tjp3
Pip5k1c
Phpt1
Ajm1
Plxnd1
C2cd4a
Gxylt2
Gm3752
Kcnk12
Ppp2r5a
Gjd3
Tarbp1
Tpbgl
Fdft1
Kctd1
Gatad2a
Dact2
Col27a1
Emb
Fgfbp3
Ntsr2
Unc5a
Syt10
Oxr1
Tbx20
Celsr1
Ak5
Kmt2a
Gja3
Dusp2
Astl
Nefl
N4bp2l1
Adrb3
Zfp143
Ptger3
Pax4
Kbtbd13
Calm3
Igfbp5
Adcy1
Plag1
Chchd7
Insyn1
Tmem200c
Gpr84
Tppp
Car7
St6gal2
Gabra5
Gm3411
Cdh4
Pygo1
Gfra4
Stum
Lrrc75b
Tmem132b
Ggt1
Sema5b
A830018L16Rik
Usp13
Wnt3a
Scn1b
Slc35f3
Reep1
Fzd10
Lysmd2
Dlgap2
Osbp
Sorcs1
Rhbdl3
Igdcc3
Eya2
Zbtb16
Car15
Gipc1
Prkaca
Rasef
Wnt3
S1pr5
Ankrd54
Dynlt1b
Lrrn2
Adamts15
Col19a1
Ap1b1
Nefh
Abhd2
Olfm1
Slit3
Gm5796
Adcy3
Gpr27
Sp1
Trappc6a
Bloc1s3
Jpt2
Rerg
Wnt7a
Pitpnm1
Cdk2ap2
Zfp869
Fgfr1
Tmem178
Grin3b
Tnrc6b
Prima1
Enox1
B3gnt7
Atp1b1
Gm10406
Gm3636
1700001C19Rik
Irx4
Mixl1
Gimap5
Gimap1
Fam53c
Shisa2
Grid1
Vax1
Pcdh1
Svep1
Shc2
Gbx2
Slc22a3
Rnf165
Sharpin
Maf1
Gm35339
Gng13
2810459M11Rik
Galnt10
Trnp1
Slc24a2
Prdm13
Abtb2
Gldn
Pax6
Ankrd34b
Zbtb7c
Mlxipl
Rrbp1
Kcnj12
Atp8b1
Kcnq3
Nmbr
Arid4a
Dlgap4
Klf11
Aph1c
Pdzrn3
Cby3
Kcna7
Susd1
Hhipl1
Ttc9
Dlk1
Ky
Pcbp3
Kcnip3
Shisa9
Gm3667
Kcnq4
Lingo2
Nptxr
Cnot3
Shisa8
G3bp1
Gm30191
Zfyve28
Cfap99
Grrp1
Ednrb
Atoh8
Cul2
Rab11b
Rab11fip4
Fbrsl1
Ush1g
Otop2
Tmem158
Mapt
Nkx1-2
H1f10
Ppic
Lama1
Kcnq2
Astn2
Mxd4
Slc6a17
Foxi3
Tmem30b
Prkg2
C130074G19Rik
Ptprt
Nkd2
Npc2
Isca2
Wnt4
Gm38538
Rasgrf2
Pmp22
Syt12
Cftr
Ebf4
Onecut3
Gsg1l
Pif1
Lurap1l
Tfdp1
Crhr2
Rnf144b
Dmrt2
Hs3st4
St8sia1
Lmo1
Colgalt2
Xpc
Lsm3
Spsb4
Fam43b
Lonrf2
Egfem1
Fam163b
Insyn2a
Cdca7l
Nt5e
Asap1
Galnt16
Mafa
Soga1
Kit
Cnr1
Skor1
Mxd1
Kpnb1
Unc5b
Bhlhe23
P2rx5
Hrc
Zfp960
Dipk1c
Ubald2
Ube2ql1
Rgs9bp
Ankrd27
Slc22a23
Neurod2
Pdxp
Foxe3
Ap2a1
Fam83d
Rims4
Tepsin
Ndufaf8
Ap3m2
Gas1
Kcnma1
Vps26b
Ncapd3
Ube2b
Cdkl3
Gse1
Ccdc177
Frmd4b
Pym1
Dgka
Ripply2
Cmc2
Cenpn
Adamts2
Hmx1
Fam78b
Fndc10
Ngdn
Olig1
Egr3
B3gat1
Tgfa
Atp1a3
Zfp654
Cggbp1
Spint1
Pdzrn4
Man1c1
Fzd2
Rbp4
Fbn2
Spns2
Efnb2
Col15a1
Camk2b
Ebf1
Plekhd1
Grm6
Wnk2
Rpn2
Mroh8
Map3k5
Dock10
1110032F04Rik
Col23a1
Tmem210
Lrrc26
Klhl40
Stox1
Adgrb1
Clip4
Maneal
Sertm1
Mme
Mvk
Mmab
Tdrkh
Islr2
Chst3
Cbln4
Wnt11
Sstr1
Pdik1l
Tmie
Als2cl
Wscd1
Rnf125
Vangl1
Crhr1
Sp2
Ngf
Slc24a4
Kank4
Lrrfip1
Cpm
Flt3
Abhd17a
Ube2c
Ensa
Myh10
Qrfprl
Gm51425
Nav2
Galnt13
Sstr2
Atp10a
Drd5
Slc30a10
Foxb1
Kmt5a
Dcaf11
Rassf10
Chd5
Rbx1
Ppm1b
Lingo1
Recql
Golt1b
Mex3c
Ptbp1
Kcna6
Gm3383
Ss18
Pkp1
Stac2
Apba2
Ankhd1
Per1
Lrrc10b
Clec2l
En2
Ctnnbip1
Qrfpr
Glrx5
Rpusd1
Chtf18
Slc43a1
Lhx3
Stip1
Aplp2
Misp3
Kcns1
Cck
Slc16a14
Gpr25
Dgcr8
Pcsk5
Tle4
Wnt5b
Zmiz1
Tmem215
Ppm1l
Sap130
Adamtsl3
Tmem121
Nsg1
Samd4b
Gmfg
Sun1
Vav3
Flt4
Pdlim1
Wnt2
Tbx21
Ttc41
Hsp90b1
Gdf7
Ksr2
Dtna
Sdk2
Irx2
B4galt6
Cd83
Ptpn14
Srpr
Foxred1
Pde1b
Mtch1
Rcor2
Egr4
Acot3
Cgas
Cyth1
Isl1
Cnpy1
Nudt17
Twist2
Srgap2
Fam72a
Gdpgp1
Cib1
Endod1
Gpr88
Col13a1
Nrp1
Kmt5c
Pias4
Insig1
Adrb1
Pou3f1
Rnf144a
Pced1b
Amigo2
Mpv17l
A930017K11Rik
Htr1b
Fgf3
Rab40c
Tle1
Megf11
Cebpd
Shisal1
Dach1
Wnt1
Ska2
Prr11
Sp4
Fam20b
1190005I06Rik
Tbl1xr1
Eva1a
Dsg2
Clmp
Nudt2
Kif24
Rnf7
P4hb
Sqle
Kcnq1
Map6d1
Kcnh1
Tafa5
Acot1
Colgalt1
Gm3488
Rab5b
Bsdc1
Tcf19
Cchcr1
Greb1l
Ppp2r2c
C1ql1
Gnal
Tom1l2
Drc3
Kctd12
Cacnb2
Prmt8
Cnot1
Gramd1b
Stk32c
Npnt
Popdc3
Helt
Prex2
Rgs7bp
Grk6
Plxnc1
Gdf10
Calhm6
Cpsf1
Dock9
Lsamp
Abcc8
Marchf11
Cpne5
Atrnl1
Aktip
Hsd11b2
Itga4
Trim62
Bmper
Fam163a
Ift140
Cramp1l
Cep192
Ptpdc1
Nalcn
Tm6sf1
Gm45623
Dnpep
Epb41l3
Fam76a
Syngap1
Cuta
Sfxn2
Arl3
Ube2d1
Smtnl2
C2cd2
Arid3c
Nlgn1
Wasf2
Ggct
Gm3500
Pde8b
Aldh1a3
Ryr3
Tom1
Klf10
Fem1a
Sost
Dhh
Megf6
Nfatc1
Ttbk2
Nipal2
H60b
Atp5g1
Vgll2
Tomm40
Prdm6
Cntn5
Ntn1
Zfp800
Cacna2d2
Rax
Dll1
Kndc1
Nppc
Trim47
Snrpd2
Qpctl
Lpar3
Hdac2
Nmral1
Mmd
Hcn4
Kdm4b
Xylt1
Acvr2b
Efcab1
Kank1
Prph
Gpr135
Mrtfa
Gm3696
Dlx5
Zswim4
Hnrnpl
Gsc2
Ess2
Dusp28
Rnpepl1
Slc2a13
Cyp26a1
Htr1d
Mis12
Derl2
Tesk2
Zfp853
Dlc1
Tnfrsf21
Ctnnd2
Esyt3
Nabp1
Insm2
Asic2
Atp5b
Mtmr4
Grm5
Hmcn2
Dnajb1
Pim1
Gpam
Zfp385b
Slc4a11
Tpmt
Kdm1b
Polr3h
Msc
Olig2
Prtn3
Plppr3
Sfrp5
Wdr25
Wars
St8sia2
Slbp
Camta1
Mpzl1
Dok7
Hs3st3b1
Panx1
Sptbn2
Cwc27
Zfyve21
Xrcc3
Esco1
Pla2g6
Ebag9
Ugt8a
Traf2
Lrch4
Fbxo24
Lrif1
Ankrd50
Slc26a4
Tbc1d30
Kcnk15
Nol4l
Adra2c
Rnf207
Zxdc
Rab8a
Grin2c
Npas1
Acot5
Adamts9
Cep131
Sgk3
Add2
Kcnn2
Spry1
Gm10499
Nkpd1
Hspa1b
Cecr2
Nacc2
Vegfa
Arhgef7
Tril
Sh2b2
Npas2
Kcnc1
Bcl6
Tob1
Tedc1
Crip1
Amz2
Tmem60
Phtf2
Shroom3
Has2
Eya1
Igfbp2
Gnaz
Deptor
Gsr
Sertad2
Dop1b
Dpf3
Ghsr
Atoh7
Mlst8
AW549877
Sh3bp5
Foxk2
Dgkg
Foxf1
Adamts20
Mrpl21
Ighmbp2
Map3k3
Olig3
Slc25a42
Chadl
Actn1
Fbln7
Wscd2
Lingo3
Dynlt1a
Klhl35
Efhd1
Grik1
3110082I17Rik
Hmgn1
Kcnk9
Susd5
Ryr2
Ephx4
Baiap2
Cyp46a1
Kl
Cdkn3
Man2a1
Nrg2
Prrt4
Smim43
Ptov1
Cyp2u1
Rai1
Paqr9
Igsf21
Arpp21
Sv2c
Adam22
Prdm10
Hnrnpc
Tcf15
Tsga10
Trim45
Bcl10
Chn2
Arhgap33
Clic4
Cyld
Mei1
Sdf2l1
Notum
Arhgap6
Cdk5rap3
Fjx1
Ascl4
Artn
Gm5784
Cic
Pkd1
Myh9
Mrpl38
Chaf1b
Dact1
Plxna2
Rusc2
Gm20346
Anp32a
Plcb1
Rab3d
Slc35f2
Hyou1
Proser2
Osbpl2
Prss56
Nes
Chrnd
Cited1
Btbd17
Irf4
Hey2
Sptbn4
Mdm1
Blvrb
Camsap3
B4galnt3
Flcn
Tjp2
Ngfr
Pdpk1
Wdr20
Fzd8
Hspa5
Cyth2
Trim71
Ndst2
Dffb
Cep104
Ltbp4
Prmt1
Ticrr
Rtn4rl1
Dph1
Myrip
Nkx2-5
Fam43a
Atg9b
Acy1
Bhlhe22
Jakmip3
Kcnc4
Zfp687
Fdxr
Tmem123
Kcnk3
Sulf2
Dnajc3
Pdgfb
Fzd9
D430041D05Rik
Hcn2
Slc1a2
Syk
Rras2
Plaat1
Lamb1
Smoc2
Htra3
Htr7
Efna2
Kcng2
Cenpu
Pin1
Gins2
E2f1
Dlx1
Tnfrsf1b
Scrt1
Sox9
Ppp6r3
Hip1
Paqr3
Stxbp6
Cxcl14
Tspan17
Psip1
Elmo2
Zfp469
Klhl23
Dscam
Nlrp10
Eif3f
Hspa1l
Hspa1a
Ncapd2
Mrpl51
Atp2b3
Ap3d1
Limk1
Ank1
Sort1
Mboat2
Wnt9b
Gm3173
Gpr155
Ntmt1
Lypd1
Ocln
Top2a
Gatd1
Hmgcr
D16Ertd472e
Prkab2
Egln3
Map3k21
Phyhipl
Smim17
Cebpa
Fyco1
Fzr1
Vkorc1l1
Natd1
Atg4d
Vps4a
Obsl1
Inha
Rap1gap2
Fut9
Lepr
Sst
Mgat5b
Lrp3
Tmem51
Cdca7
Adcy2
Bean1
Lbx1
Gm2102
Cltc
Creb3l2
Afg3l2
Iqsec3
Insm1
Angptl4
Bricd5
Cnnm2
Pgp
Emilin3
A4galt
Fmnl1
Pip4p1
Sgtb
Nln
Agap1
Fam76b
Cep57
Mtmr7
Ets2
Zfp341
Dennd5b
Fam210b
Igfbp3
Kbtbd11
Igf2
Abcb9
Col18a1
Alkal2
Gm2897