ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035119 | Embryonic nose
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◣ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Gnai2
Phrf1
Tjp3
Pip5k1c
Atg12
Ap3s1
Fam53c
Sp2
Cmc2
Cenpn
Arrdc4
Ndufb1
Cpsf2
Septin11
Taf15
Rita1
Ddx54
Lrpprc
Tigd5
Eef1d
Iqch
Aagab
Cnot6
Tardbp
Calml3
Rtn3
Arntl
Slc14a2
Cln8
Smim4
Nt5dc2
Hdac2
Flad1
T2
Flcn
Psip1
Rfx1
Prkdc
Mcm4
Arid4a
Myh14
Tst
Mpst
Asah1
Tmem260
Eed
Smc3
Cenpp
Galnt10
Calm3
Sod2
Fus
Osbp
Git2
Ankrd13a
Ptcd2
Mrps27
Sec14l1
Uchl3
Abhd2
Slbp
Sash1
Hyal2
Ska2
Prr11
Hnrnpc
Atrnl1
Ptov1
Prkci
Tada3
Arpc4
Mlst8
Bricd5
Dut
Gipc1
Cdiptos
Cdipt
Rpl22
Aldh4a1
Ankrd54
Pkia
Dohh
Ppm1l
Nphp4
Kcnab2
Rab5b
Ptdss1
Mterf3
Cenpu
Eif2ak3
Sharpin
Maf1
Gm35339
Pik3r3
Igsf8
Prdm10
Ttll7
Ptcd3
Polr1a
Rpn2
Mroh8
Ephb2
Ndst2
Por
Akirin1
Ift27
Rbm25
Rmnd5a
Tepsin
Ndufaf8
Cwc27
Zxdc
Ube2c
Atg101
Uros
Bccip
Fbxo33
Spty2d1
Pknox1
Dnmt1
Sgms1
Selenow
Uqcrh
Lrrc41
G3bp1
Bzw1
Noct
Diaph1
Robo1
Rnf5
Agpat1
Madd
Zfp219
Tmem253
Tmem218
Fkbp3
Fancm
Paxip1
Prox2
Dlst
Mblac1
Rnasek
0610010K14Rik
Ppp1r13l
Cd3eap
Arhgef1
Rel
Cnot1
Khsrp
Slc36a4
Map7d1
Them6
Nlk
Atp5b
Dpp9
Cspp1
Cops5
Adgrv1
Ankhd1
Cul2
Sp1
Nmral1
Ttll10
Cenpe
Trip10
Gpr108
Mrpl21
Ighmbp2
Tcerg1
Mapk8ip1
Fam227a
Cby1
Wasf1
Cdc40
H2-DMa
Brd2
Hrc
Top2a
Gm5165
Med23
Tcp11l2
Nt5c3
Mia2
Mtss2
Ccser2
Rab11b
Zfp869
Rpl27
Oxr1
Cltc
Tom1
Nfatc2ip
Rab21
Fam204a
Arhgap19
Mis12
Derl2
Cdk12
Ccdc85c
Slc39a3
Ap2m1
Ly6g6f
Abhd16a
Slc35e2
Sh3kbp1
Rbbp6
Ss18
Nudt2
Kif24
Cd164
Eif3b
Bcl6
Mat2a
Wwox
Armc1
Kctd2
Atp5h
Jun
Myl12a
Raly
Palb2
Dctn5
Frat1
Myadm
Gnb2
Dnm2
Parpbp
Nup37
Kpna1
Per2
Dgat2
Frat2
Glo1
Klhl26
Bzw2
Ankmy2
Cytl1
Cdca7l
Paip2b
Oacyl
Smim14
Zfp821
Cyth1
Ist1
Rin2
Srgap2
Fam72a
Nufip1
Gpalpp1
Qrich1
Zfp24
Prkaca
Ube2b
Cdkl3
Fsbp
Cic
Tcp11
Mllt11
Cdc42se1
Fgd4
Tbc1d17
Akt1s1
Ttc41
Hsp90b1
Prr19
Pafah1b3
Cdca8
9930104L06Rik
Rhbdd3
Ewsr1
Sigmar1
3110082I17Rik
Lrch4
Fbxo24
Uba1
Syn1
Dhx32
Wasl
Akt2
Utp18
Mbtd1
Pnn
Jpt2
Mfsd8
Immp1l
Elp4
Gatad2a
Stt3a
Tmem9b
Hars2
Hars
Dhrs3
Kmt5c
Rnf26
Glrx5
Fanci
Rlbp1
Kdm4b
Zfp143
Katnb1
Stip1
Lsg1
Wasf2
Evi5l
Gas7
Tbck
Aimp1
Pin1
Nup54
Mrpl44
Pfdn4
BC005537
Fchsd2
Sh2d5
Psmb3
Pcgf2
Pan2
Il23a
Tnrc6b
Pou2af1
Gm51425
Mvk
Mmab
Cct8
Cnot3
Abhd18
Mrpl30
Mitd1
Pitx3
Gbf1
Pdk2
Ddx56
Hexim2
Mtmr14
Traf2
Nuf2
Myh10
Mtch2
Zcchc14
Polg
Baz2a
Tctn2
Wdr77
Atp5pb
Wdr36
Atg16l2
Slc14a1
Mrps31
Lars
Srxn1
Hbp1
Cfap298
Luc7l2
Zfp654
Cggbp1
Hnrnpa2b1
Cbx3
Rab40c
Kdm4a
Prrt1
Ppt2
Slc43a3
Lemd1
Fbh1
Ankrd16
Mrpl1
Spns2
Dcps
Zfp386
Zfp961
Clca3a2
Zfp687
Actr3
Cdc25c
Smim17
Dmxl1
Gm6712
Prpf40a
Arl6ip6
Slc25a20
Cyth2
Prnp
Prn
Frmd6
Arl2
Cul1
Sphk2
Rpl18
Fam83e
Canx
Rbm39
Tmem94
Ngdn
Klhl21
Spata17
Gpatch2
Zswim4
Ube2j2
Copz1
Spring1
Rnft2
Wdr25
Wars
Fyn
Aig1
Tedc1
Crip1
Znhit1
Plod3
Ttc14
Lrriq3
Fpgt
Tle3
C1qtnf6
Wdr27
1600012H06Rik
Tex14
Kpnb1
Camta1
Timm17b
Pqbp1
Zfyve21
Xrcc3
Tut1
Hdac1
Cgref1
Abhd1
Proser1
Nhlrc3
Rpl19
Cacnb1
Ap2a1
Itgb4
Calm1
Ss18l1
Psma7
Tdrkh
Cstf2t
Srp19
Ift140
Cramp1l
Snrnp200
1810024B03Rik
Knl1
Opa1
Nucb2
Uvssa
Dcp1a
Fut10
Scamp1
Med30
Dnajc16
Casp9
Sema3b
Utp3
Rusc2
Tmcc3
Tube1
Fam229b
Trib1
Isy1
Sel1l
Flywch1
Anapc5
Pex3
Adat2
Ilf2
Rab28
F13a1
Mettl25
Ccdc59
Slc33a1
Opa3
Chordc1
Pip4k2b
Kat6b
Ddost
Mgrn1
Kansl2
Gstp2
Lnpep
Pcyox1l
Nap1l4
Styxl1
Mdh2
Tfcp2
Zbtb3
Polr2g
Hexa
Dap3
Mphosph10
Mcee
Anp32e
Rab33b
Tom1l2
Drc3
Clasp2
Got1
Pip4p1
Spdl1
Mocs3
Dpm1
Txnip
Zfp748
Ergic1
Nol6
Denr
Tspan4
Polr2l
C330007P06Rik
Fam20b
Kctd9
Cdca2
Mtf2
Ap1g1
Ifna13
Meis1
Zfp101
Fdxr
Npc2
Isca2
Lancl2
Bms1
Cnot10
Grk5
Mcm3
Klhdc10
Cnot11
Gtpbp3
Ano8
Trir
Get3
Nbr1
Brca1
Rrp15
Zbtb40
Gnas
Olfr806
Haspin
Dbp
Car11
Slc29a1
Mymx
Ctnnd1
Syt7
Sgms2
Tbl1x
Lig4
Abhd13
Tubb4b
Fosl1
C1d
Zfp526
Dedd2
Gm33887
Psmb2
Ppp6r3
Rps6ka5
Gprc5b
Get1
Ddx41
Nedd4
Galk2
Cops2
Hnrnpr
Ints10
Mthfd1l
Hsd17b12
Rbm27
Nlrp10
Eif3f
Aff1
Ufsp2
1700029J07Rik
Pabpn1
Ssbp1
Zfp180
Zfp574
Grik5
Dhx33
Nudcd2
Hmmr
Ints4
Uchl1
Fam149b
Ecd
Hinfp
Hnrnph2
Gla
Smim38
Leng8
Znrd1as
Znrd1
Ndufb3
Fam126b
Sh3glb2
Miga2
Timm22
Mtfp1
Krr1
Ciart
Tob2
Qtrt2
Ccdc191
Adnp
Trip4
Ift22
Wdfy2
Mob1a
Chchd2
Drg2
Dcaf7
Stat3
Zbtb5
Tmem101
Elk3
Gpaa1
Exosc4
Retsat
Elmod3
Gpn3
Fam216a
Zfp513
Mfsd13b
Cdr2
Trim45
Esyt2
Srsf1
Atp6v0c
AW549877
Ccdc88a
Cnot8
Gatad2b
Ube2f
Ubiad1
Mtor
Tmem107
Nvl
Gjc3
B3gntl1
Rpp38
Acbd7
Clic4
Anln
9530077C05Rik
Fdft1
Xab2
Pet100
Pcp2
Chd6
Sptlc2
Mtg1
Sugct
Mplkip
Zdhhc5
Rogdi
Spsb3
Nubp2
Tmx2
Med19
Acp2
Ensa
Yars
S100pbp
Slc35g3
Polr2a
Tfg
Traf7
Ccdc89
Lamp1
Zfp646
Zfp668
Cluap1
1700037C18Rik
Rpa2
Tcf3
Cst6
Hnrnpl
Plekhb1
Kansl3
Fer1l5
Recql
Golt1b
Ap3s2
Nme1
Pum3
Zfp560
Mre11a
Ankrd49
Dffb
Cep104
Rpl26
Rtraf
Postn
Ddx19b
Aars
Angpt2
Yipf2
Timm29
Tcam1
Smarcd2
Tspyl1
Rab4b
Mia
Tmem198b
Dnajc14
Atp5g1
Tmem262
Chic2
Bcas3
Vps51
Herc2
Kifbp
Aspn
Smarcal1
Tulp4
Nop14
Grk4
Faap24
Htra2
Dqx1
Aup1
Fam76b
Cep57
Ubald2
Adcy4
Tomm40
Polr3b
Snrpc
Klhl20
Ap3m2
Yju2
Znhit3
Mxd1
Mrpl39
Trappc9
Smg8
Zdhhc24
Actn3
Rasgef1c
Cipc
Ube2s
Cct5
Atpsckmt
Kifap3
Ogfod1
Nudt21
Trp53rkb
Atf7
Ndufs7
Zfp691
Zfp472
Ggct
Pigm
Eipr1
Sacm1l
Fem1b
Tma16
Orai3
Nasp
Cox7a2l
Alkbh3
Rrbp1
P4hb
Cacybp
Ift46
Arcn1
Trp53rka
Psph
Cct6a
Usp22
Ablim1
Mlf2
St6galnac6
Drosha
6030458C11Rik
Wdr92
Pno1
Ticrr
Zswim3
Acot8
Gid8
Dido1
Lama4
Cyp2u1
Il31ra
Rheb
Fos
Zfp648
Akap8l
Cfap20
Atp8a1
Septin7
Uvrag
Map3k3
Emp1
Mcoln3
Ercc6l2
Kifc5b
Taco1
Lima1
Mon1b
Sf3b2
Gal3st3
Slc25a25
Naif1
Dcun1d4
Calcoco1
Gabpb2
Cebpa
Myl12b
Ppip5k2
Gin1
Smg9
Pitpnm1
Cdk2ap2
Ptrhd1
Cenpo
Dad1
Abhd4
Ncam1
Dnajb5
Nsfl1c
Creb5
Cnpy3
Chmp5
Bag1
Ect2
Rbm15b
Manf
Spag7
Dnajc24
Kif1b
Ccdc57
Nqo1
Med6
Nup133
Mcoln1
Gnai3
Cabin1
Zbed5
Slc4a2
Cdk5
Creld2
Alg12
Wdr90
Fam89a
Espn
Arid1a
Siah1b
Klhdc4
Ttc26
Man1b1
Rab5if
Ppp1r11
Fra10ac1
Tmem167b
Ppox
Rer1
Morn1
Ivd
Rbbp5
Mtmr6
Ttbk2
Zdhhc16
Exosc1
Gpsm1
Aacs
Col9a2
Rwdd1
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Itgb3bp
Efcab7
Kdsr
Umad1
Rpa3
Rgs2
Rraga
Rbbp9
Fitm2
Mideas
Chadl
Hip1
Tbp
Psmb1
Os9
Tbccd1
Dnajb11
Tmem198
Chpf
Adgra3
Gcnt2
Rplp0
Lyrm1
Dcun1d3
Ahcyl2
Wtap
Btbd8
Oip5
Nusap1
Gpr173
Fam227b
Dtwd1
Hspg2
Gsk3b
Hspa4
Egr2
Vamp4
Cdyl
Pxmp4
Ttc4
Zkscan1
Inava
Cnnm2
Fam53b
Atf6
Fbxo5
Ppwd1
Cenpk
Rbm15
Fam110b
Rpl9
Lias
Phb
Swsap1
Cox7a2
Mbd3
Cep135
Fbxw5
C8g
Txnl4b
Dhx38
Cacng2
Polq
Insr
Tjp2
Rtkn
Rptor
Rrm1
Eapp
Limch1
Tbcb
Polr2i
Ovol3
S1pr4
Msantd4
Ncln
Ylpm1
Zfp866
Ankrd39
Gpatch8
Tox4
Rab2b
Micu2
Snx17
Eif2b4
Golph3l
Snx12
1700034J05Rik
Gm3448
Gm3417
Tcte3
Ermard
Psd
Fbxl15
Sec22b
Arpc1b
Kdm6b
Mnt
Capn2
Prmt5
Cstf1
Aurka
Rnase4
Ang
Dync1li1
Gnaz
Xylb
Tmem41b
Crem
Ap3d1
Vcp
Neil3
Ccdc130
Taf9
Rad17
Ak6
Nudt15
Ube2a
Anxa1
Tatdn3
Nsl1
Dixdc1
Psmd5
Cutal
Cfap77