ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028800 | Embryonic gonad
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◣ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Wdr77
Atp5pb
Cldn34d
Ptcd3
Polr1a
Rpl19
Cacnb1
Calm3
Cdk12
Ift27
Pknox1
Qrich1
Pik3r3
Phrf1
Arntl
Arid4a
Sharpin
Maf1
Gm35339
Pfdn4
Septin11
Tcp11l2
Tada3
Arpc4
Fus
Lrpprc
Cmc2
Cenpn
Cdiptos
Cdipt
Trir
Get3
Prkdc
Mcm4
Gipc1
Uchl3
Mat2a
Top2a
Dgat2
Taf15
Denr
Flad1
BC005537
Tigd5
Eef1d
Inip
Cenpe
Uqcrh
Lrrc41
Hyal2
Mblac1
Dcun1d4
Tardbp
Mlst8
Dut
Mapk8ip1
Psmd5
Cutal
Eif3b
Ptcd2
Mrps27
Nr6a1
Dnm2
Cnot6
Por
Camta1
Rita1
Ddx54
Hexim1
Mgrn1
Srf
Dohh
Tepsin
Ndufaf8
Ap3m2
Mfsd13b
Cdr2
Prkci
Slc39a3
Wdr27
1600012H06Rik
Gnb2
Tctn2
Zswim4
Aldh4a1
Tmem218
Arrdc4
Mrps11
Mrpl46
Jun
Ppm1l
Lsg1
Atg101
Slbp
Tbc1d17
Akt1s1
Nphp4
Kcnab2
Cnot1
Sp2
Mia2
Dpp9
Dnmt1
Sash1
Styxl1
Mdh2
Tom1
Rhbdd3
Ewsr1
Ube2d3
Uros
Bccip
Fam227a
Cby1
Smim10l1
Hnrnpc
Cln8
Hs3st3a1
Eif2ak3
Abhd2
Ube2c
Tmem260
Atp5b
Mapk14
Slc26a8
Asah1
Eed
Ptdss1
Mterf3
Wasf1
Cdc40
Ankrd54
Prmt1
Rmnd5a
Atrnl1
Noct
Zfp383
Zfp27
Rbm39
Uhrf2
Gm12258
Trip10
Gpr108
Traf2
Arap1
Prkaca
Hrc
Ttll7
Psip1
Ankhd1
Pkia
Oxr1
Tmem102
Fgf11
Chrnb1
Elavl2
Eif4a3
Rpl22
Ttc41
Hsp90b1
Cdc25c
Fam76a
Ndufb1
Cpsf2
Ptov1
Tst
Mpst
Selenop
Rnf5
Agpat1
Samd4b
Gmfg
Nucb2
Cep135
Ncoa2
Map7d1
Naa35
Slc25a4
Hydin
Smc3
Frat1
Nudt2
Kif24
Rtn3
Nectin3
Ankfy1
Mvk
Mmab
Prr19
Pafah1b3
C1d
Selenow
Rps6ka5
Fbxo33
Ddx19b
Aars
Rtkn
Bcl6
Pin1
Siah1b
Nsun3
Lrch4
Fbxo24
Fanci
Rps7
Tspyl1
Pias2
Glrx5
Tmem198b
Dnajc14
Hdac2
Kmt5c
Chd6
Ccdc85c
Raly
Tmbim6
Per2
Tcerg1
Paip2b
Kctd2
Atp5h
Usp1
Pawr
Rpl12
Lrsam1
Robo1
Pxmp4
Cwc27
Hspa4
Polg
Tnrc6b
Pan2
Med30
Nol6
Cd164
Wnt3
Srpk2
Rab28
Zbtb40
Rab5b
Timm17b
Pqbp1
Tipin
Fchsd2
Dnajb4
Fubp1
Atf7
Sel1l
Zswim1
Mtmr14
Gm5165
Atp8a1
Khsrp
Eif5
Mob1a
Ift22
Sufu
Actr1a
2310022A10Rik
Madd
Cenpp
Cic
Sos2
Rnpc3
Oscp1
Fam204a
Stip1
Timeless
Cfap77
Ttf1
Tmem209
Ssmem1
Utp18
Mbtd1
Pip4k2b
Calcoco1
2610008E11Rik
Kat6b
Fdft1
Kansl2
Rpp38
Acbd7
Iqch
Aagab
Zfp687
Lamp1
Sipa1l1
Canx
Sarnp
Ormdl2
Add1
Isoc2b
Sec23ip
Mcmbp
Hdac1
P2ry2
Gripap1
Spsb3
Nubp2
Nudt1
Ly6g6f
Abhd16a
Ska2
Prr11
Mis12
Derl2
Kdm4b
Wrap53
Trp53
Zfp691
Myl12a
Pycr2
Micos10
Srgap2
Fam72a
Ephb2
Cct5
Atpsckmt
Psmb2
Mucl3
Sh3glb2
Miga2
Wdr6
Paxip1
Prpf40a
Arl6ip6
Rraga
Uba1
Immp1l
Elp4
Tle2
Rlim
Uqcrq
Gdf9
Supt5
Scamp5
Zfp574
Grik5
Meis1
Spag8
Hint2
Gm20346
Anp32a
Srarp
Stxbp4
Cox11
Hnrnpr
Edrf1
Maco1
Tjp3
Pip5k1c
Uchl1
Uhrf1bp1
Galnt10
Wbp1
Ino80b
Rbm15
Bpgm
Acat2
Git2
Ankrd13a
Zfyve21
Xrcc3
Bub1
Pold4
Ptch1
Frem3
Ttbk2
Tmprss3
Prdm10
Smarcal1
Dcaf11
Ss18
Nudcd2
Hmmr
Flcn
Recql
Golt1b
Nr5a1
Rpusd3
Rbm27
Relch
Pign
Cemip
Rps19
Tbccd1
Dnajb11
Palb2
Dctn5
Zbtb5
Xrcc1
Pinlyp
Ensa
Tmem88
Naa38
Cyb5d1
Zfand3
Zfp143
Hbp1
Junb
Katnb1
Gm17019
G3bp1
Tubb4b
Dcaf7
Kdm4a
Fam222a
Sp1
Speer4e
Narf
Rcl1
Zfp869
Rpn2
Mroh8
Glce
Ppp6r3
Ap2a1
Rfx1
Psmb3
Pcgf2
Cfap73
Orai3
Ppm1b
Kctd9
Cdca2
Dcps
Gatad2a
Dbp
Car11
Ubald2
Osbp
Evi5l
Rps6ka2
Rab11b
Sult6b2
Kpna1
Tmem125
Kmt2a
Wwox
T2
Fam53c
Il31ra
Abhd6
Jag2
Olfr806
Sspn
Gnai2
Akirin1
Cenpu
Myh14
Prox2
Atg12
Ap3s1
Ndst2
Eapp
Tex14
Slc35g3
Polr2a
Sod2
Ube2b
Cdkl3
Itgb4
Cbr3
H2-DMa
Brd2
Dlst
Mtf2
Wasl
Vmn2r102
Diaph1
Cul2
Cltc
Bzw1
Ajuba
Fam20b
Rps27l
Rps29
Dot1l
Ppp1r13l
Sec14l1
Xpc
Lsm3
Pa2g4
Zfp219
Tmem253
Hexim2
Fgd4
Srxn1
Dhrs3
Slc35e2
Rbm25
Hjurp
A730008H23Rik
Cd3eap
Proser1
Nhlrc3
Smg9
Tspan4
Polr2l
Mfsd8
Lrrc56
Hras
Znhit1
Plod3
Cdca7l
Akt2
Mtss2
Ap2m1
Tmem41b
Calml3
Rnasek
0610010K14Rik
Taf12
Fbxl14
Nemf
Inka1
Atp6v0c
Bzw2
Ankmy2
Tmem250-ps
Phlda3
H3c15
H3c14
H2ac19
H2ac18
Cdt1
Rab33b
Igsf8
Tjp2
Abhd18
Gtf2a1
Arhgef1
Fam227b
Dtwd1
Frat2
Dnajc16
Casp9
Mmp15
Tbck
Aimp1
Gm3448
Gm3417
Susd6
Pole3
Alad
4933430I17Rik
Yif1b
Trappc9
Tle3
Ctnnb1
Nme1
Get4
Ubr4
Slc35b1
Bcl9l
Cct8
Zfp821
Uvssa
Ccser2
Arl2
Pum3
Nmral1
Ilf2
Chmp7
Atg16l2
Slc14a2
Zxdc
Ints10
Cfap20
Slc30a5
Mrpl21
Ighmbp2
Htra2
Dqx1
Aup1
Rbbp6
Frmd6
Stat3
Nt5c3
Them6
Sema3b
9030025P20Rik
Rpl27
Bbs2
1700016H13Rik
Ints4
Fkbp3
Fancm
Tcte3
Ermard
Mapkapk5
Limch1
Taf9
Rad17
Ak6
Nuf2
Isy1
Utp3
Angptl4
Myadm
Smim17
Mtch2
Tob1
Spty2d1
Lfng
Birc2
Ddx41
Chordc1
Tpt1
Wdfy2
Plekha1
Magi1
Get1
Mrpl30
Mitd1
Rgs3
Tecpr1
Gfra4
Fnbp1
Zscan25
Gm3435
Kremen1
Sncg
Mmrn2
Rusc2
Tmem107
Ss18l2
Gramd1b
Cspp1
Cops5
Clic4
Nfatc2ip
Fam149b
Ecd
Ttc14
Tcf3
Sfi1
Txnip
Rarg
Frmd4b
Cnot3
Rbbp8
Limk2
Oprd1
Faf1
Tomm40
Esyt2
Med6
Niban2
Smim4
Nt5dc2
Armc1
Snrpc
Psmd3
Nabp1
Tfg
H4c3
H1f6
Opa1
Actr3
Rps12
Tsga10
Kpnb1
Sema3f
Usp20
Kifap3
BC005624
Gopc
Dffb
Cep104
Zfp607b
Calm1
Trim41
Tmem262
Hes6
Gtf2f1
Plekhb1
Wdr92
Pno1
Fbxw7
Zfp24
Stk32c
Rab4b
Mia
H3f3b
Aard
Nup107
Dgat1
Cactin
Rbbp9
Ccnt2
Klhl21
Rps3a1
Plekha7
Rer1
Morn1
Crtc1
Srm
Iqcn
AW549877
Zcchc14
Eps15
Fitm2
Sigmar1
Egr2
Aig1
Ngdn
Zfp654
Cggbp1
Cyth1
Nup133
Zfp526
Dedd2
Spdye4b
Rbak
Bricd5
Gpn3
Fam216a
Kctd14
Grb2
Spink5
Bmf
Vta1
Evpl
2900026A02Rik
Ist1
Lig4
Abhd13
Pop7
Dapk3
Sgms1
Pip4p1
Baz2a
Kpna3
Fstl3
Sde2
Tmco3
Rlbp1
Dcun1d2
Gale
Rgl2
Nfat5
Abcf2
Ifna13
Kansl3
Fer1l5
Arhgef4
Nacc2
Supv3l1
Cipc
Ltbp1
Zfp385b
Bod1l
Map3k7
Arhgap11a
Poc5
Mef2a
Gpatch8
Rpl3
Ift140
Cramp1l
Mideas
3110082I17Rik
Anln
9530077C05Rik
Ttll5
Erg28
Rel
Dap3
Eif4e
Rasip1
Malt1
Ier5
Hnrnpa2b1
Cbx3
Fam3c
Arf2
Oacyl
Aebp2
Rnf7
Lemd1
Copz1
Chchd2
Mettl25
Dhx32
Ccdc59
Tmcc3
Colgalt1
Rbbp5
Npc2
Mdm2
Isca2
Cep63
Anapc13
Hr
Kdsr
Jund
Fdxr
Kcnn1
Ssrp1
P2rx3
Sacm1l
Slc33a1
Spc25
G6pc2
Rap2a
Haspin
Ltbp4
P4hb
Xpnpep3
St13
Adnp
Fam83b
Usp12
Zc3h18
Apobec2
Cfap298
Dcp1a
Yars
S100pbp
Pdcd4
Pias4
Zfpl1
Nlk
Cdca5
Sun1
Sema4d
Slc2a9
Man1b1
Rab6a
Dab1
Ep400
Banp
Galnt9
Fra10ac1
Arl15
Birc5
Cdca8
9930104L06Rik
Wasf2
Nrbf2
Pex3
Irf2bp2
Adat2
Ap1g1
Nup54
Med23
Cebpa
Rwdd1
Aph1b
Med17
Lsr
Fam187b
Mknk2
Myl12b
Ube2j2
Txnl4b
Ireb2
Dhx38
Rbx1
Pmepa1
Vps26c
Hspa5
Kifc5b
Nomo1
Abcc6
Rab21
Gm51573
Cpsf1
Kbtbd3
Klf7
Jpt2
Spring1
Rnft2
Zmynd8
Ss18l1
Psma7
Ttll10
Rab40c
Clptm1
Srd5a1
Nsun2
Mafa
Arid3b
Slc25a25
Atf2
H4bc24
H2bc23
H2ac24
H2ac23
Vwa1
Smim14
Ube2f
Sh3gl1
Chaf1a
Snrnp200
1810024B03Rik
Ric8b
Timm13
Ssbp2
Cirbp
Cbwd1
Cst6
Saysd1
Dhx33
Tubg1
Retreg3
Pradc1
Cwc22
Cct7
Nlrp10
Eif3f
Stx16
Tex2
Tut7
Thap12
Ier5l
Farsb
Rin2
Rad23b
Tmed2
Smim38
Poldip3
Mllt11
Gm3739
Cdc42se1
Calr
Vapa
Ppat
Paics
Tacc1
Gm51425
Lancl2
Yipf2
Trib1
Timm29
Hdlbp
Ndufs7
Smc6
Gen1
Fem1b
Btbd11
Usp53
Unkl
Ptpn14
Clasp2
BC003965
Adamts19
Ubald1
Tram1
Cdk11b
Sh2d5
Otud6b
Mindy2
Atp10a
Ppp2r5a
Mrpl1
Cacybp
Supt4a
Setd3
Commd1
Ccnk
Ufl1
Nvl
Ddx20
Mrpl44
Gas1
Hnrnpl
Upf1
Stag1
Stt3a
Lsm14b
Chmp5
Ccdc126
Bag1
Epg5
Kif13b
Atg2a
Ggct
Ppwd1
Phf12
Cenpk
Atp5g1
Plag1
Chchd7
Ing1
Herc2
Mfsd4b4
Eea1
Dsg2
Dst
Aff1
Rtn2
Nudt9
Ablim1
Oasl1
Fam89a
Dlc1
Map3k5
Clptm1l