ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100250 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◣ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

NLaz
CG31659
Wnt4
Alp13
Spn28Da
CG7102
Spn28Db
Mtpalpha
gcm
CG31709
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
CG34260
CG9171
CG15556
Gycbeta100B
CG13465
BobA
Lmpt
lectin-28C
CG14535
TwdlE
abd-A
siz
CG31275
Rlip
CG5697
Ca-beta
Vm32E
CG3527
CG11436
CG3546
CG11444
Abd-B
CG10041
CG10038
vir-1
CG6405
CG6388
CG5446
beat-IIIc
CG32461
CG32295
Spn
dnt
CG13086
TfAP-2
lectin-46Cb
CG1648
mthl14
E(bx)
CG1688
Cpr100A
CG15545
mRpS33
CG31279
CG17565
CG14881
Sfp84E
Os-C
CD98hc
TotX
Pop2
Grip163
CG6928
CG6118
Act88F
Osi1
CG1077
Syn2
CG12009
lace
Calx
CG43446
ppk7
ppk14
CG9500
Cyp12e1
shot
DJ-1alpha
Hk
CG13280
mdy
CHES-1-like
CG15478
nAChRalpha6
Fkbp59
CG4537
CG34183
Mp
Sprn
CG5906
CCDC151
Usp47
DnaJ-1
scyl
phyl
Oaz
prage
Adar
GlyP
CG4259
CG10365
nau
CG10232
CG16721
Usp30
Nc73EF
Cpr73D
PGRP-LA
PGRP-LC
Ama
bcd
stl
CycB
CG14762
ome
CG43121
CG12863
Indy
ftz-f1
CG9005
CG15615
Ldh
sm
CG42753
CG43277
CG18367
CG3638
CG11403
CG1354
CARPB
raskol
CG10481
Fancm
Eh
CG4597
Ptpmeg2
CG3106
Myd88
SNF4Agamma
RagA-B
CG11970
CAHbeta
Sox100B
dco
CG12007
Tak1
CG42579
CG14903
CG14891
CG13962
Ntmt
CG46338
CG30010
Lime
Asator
Men
Ufd1-like
NaPi-III
mRpL2
FoxK
Ptp61F
312
eya
Got1
stc
CG15269
Rrp46
Irp-1B
CG6345
wcy
CG4955
CG4949
CG12853
ADPS
Lap1
Cpr76Ba
Cpr76Bc
Cpr76Bb
Gbs-76A
fal
Npc2b
wgn
CG14270
CG10804
CG10803
CG10802
CG42495
caps
CG17450
GCS2alpha
Gr89a
Decay
Cad89D
CG6330
SIFaR
Tsp
Nhe3
CG11327
jp
CG46468
brwl
Rubicon
CAH3
Pde1c
CycY
nrv2
CG43610
CG17376
Tlk
CG17377
Rala
Nrt
CG9344
CG9313
CG34115
CG15650
CG15649
CG42268
CG43693
CkIIalpha-i3
CG13896
CG13895
scpr-B
scpr-A
CG5214
CG17734
CG6142
LanB2
tzn
Spc105R
CG3698
SP555
CG14042
GILT3
GILT2
eIF3d1
CG18754
CG16710
sev
PDZ-GEF
Sfp36F
CG5790
CG43362
Dys
CG15025
CG12986
for
Mbs
Diap1
E(Pc)
mRNA-cap
CG32599
mud
Ubr1
CG8306
CG5089
N
Bub1
Bsg25D
Lasp
Dab
CG43954
asl
CG12617
CG33226
CG30287
CG30286
CG30283
par-1
RapGAP1
CG3358
OXA1L
galla-2
CG6409
Cpr67Fa1
zip
uzip
CG31823
CG31821
snu
Sid
CG33346
Nepl18
Nepl17
RpS21
CG3104
CG2991
ham
CG31909
RpS11
CG8858
Loxl1
CG11334
CG11333
CG34458
CG34457
Adgf-E
Svil
unc-5
CG42814
CG42813
PK1-R
CG9920
CCHa1
Smyd5
Oga
Nelf-A
CG3337
Or67d
can
DCX-EMAP
Vha13
Nup58
CG6195
CG31220
CG31219
fl(2)d
CG6329
CG13339
CG4390
CG17193
mdlc
goe
Twdlalpha
CG34112
CG9855
CG9853
CG14647
sbr
pkaap
crp
CG17329
CG13258
Ent2
CG9596
IFT52
COX5BL
COX5B
CG5897
Gp150
PIG-K
east
CG14218
CG14204
CG14219
velo
CG13970
Ist1
CG8549
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
CG10222
flr
CG8519
l(3)mbn
pzg
ppl
CG12974
CG43332
CG7509
CG18808
CG43290
nxf4
CG31496
CG12926
GstT2
Wdr62
CG31663
CG15358
Pex3
Pdi
CG32147
FucTA
TTLL4A
piwi
CG12253
CG12531
meso18E
CG4020
CG12236
Eaat2
CG5213
Dh31-R
CG4734
CG17047
CSN3
CG13255
CG11456
Spn75F
CG14416
Sox21a
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
CG32117
CG12520
waw
Sep1
bbx
SrpRbeta
CG6511
CG32022
Tpst
CG46311
CG32633
bun
Gmap
Fs
scb
stg
SP1029
CG45544
Edg84A
Ccp84Ag
Galphao
CG12895
CG34253
CG33120
CG31752
CG10600
TM9SF3
mthl2
Eaf6
CG31191
Atpalpha
Pez
Cpr
CG7381
Paip2
CG7091
RpS7
CecA2
CecA1
Anp
CecB
CG8945
CG4991
CG16700
BBS4
RpS26
Rich
Ddx1
Csp
CG11523
Nuak1
Mef2
cm
CG4593
CG42308
CG32736
CG3032
Gle1
beta3GalTII
Vps25
Pax
RtcB
CG13085
Alp12
ver
nst
Gcn5
eIF2beta
RpL37b
CG9876
CG42703
Lectin-galC1
lectin-37Db
lectin-37Da
shep
RpI135
CG4213
CG1421
CG1428
CG43338
SNRPG
RpS19a
Rok
mthl1
sky
RPA2
Mtp
CG9272
CG43739
Panx
CG9485
Tsp68C
Hml
CG8757
CG8750
RpLP2
Cdk4
CG8311
Den1
CG8490
CG34021
sced
Dpit47
Adf1
CG9988
CG10011
CG5890
CG5886
CG14545
His3.3B
fh
Bap111
RpIIIC53
mus304
CG7341
CG32195
CG42784
out
RhoGEF64C
CG7514
CG18418
CG15876
axo
nrv3
Cib2
rtv
Lint-1
Dlic
Toll-7
Idh3a
CoRest
cpo
Rim
CG14423
CG3603
CG17959
lz
c11.1
Prm
Fhos
CG13306
dikar
CG13192
prd
dpr20
tara
CG13293
CG8818
CG8569
CG33632
Prp31
Msh6
CG7011
CG6878
CG14947
CG2111
nej
MED8
CG8929
rswl
Prp19
CG5189
CG30120
CG14459
CG1724
CG9304
CG34029
LSm7
glu
ChLD3
BuGZ
cindr
CG31960
bark
Nepl16
CG34027
CG13907
Usp10
tow
retm
frj
Spn77Ba
Spn77Bb
CG34313
CG32832
CG31743
Snp
CG13501
CG13500
CG9896
InR
Gr98d
Gr98c
Gr98b
ZnT77C
ND-39
CG32425
CG18281
CG33557
CG2990
CG31099
CG31087
CG10559
CG10550
RpL37a
Sytalpha
Oli
CG6870
HisRS
CG6470
Bx
Ggt-1
CG6481
Cpr30B
CG17855
CG13113
Sec63
pst
CTCF
l(1)sc
CG13481
Sox102F
CG3092
Pif1
Pgant4
CG31776
Son
Kap-alpha3
CG9399
CG9396
CG16790
HnRNP-K
sr
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Chs2
Lerp
IntS12
His2Av
ball
SPARC
sgg
nmdyn-D6
mRpS25
CG14414
CG3556
CG30076
CG8728
CG34430
CG30380
CG30379
CG34431
tna
CG7956
CG5504
Sesn
CG46429
Alg3
CG13690
RpLP1
CG13692
CG11885
BBS8
capu
TfIIA-S
tbrd-1
Pli
Lk
CG42758
CG34039
UGP
Pdxk
CG32040
CG32039
ebi
AP-2alpha
chif
CG4455
CG42231
CG7763
CG34054
CG30026
CG7458
Crys
Or33c
Or33b
Rsbp15
Cog1
CG4860
CG17404
CG12256
CG34384
sgll
CG31473
CG2993
RpS28a
Mgat2
Axn
Jafrac1
CG10949
CG10947
Arpc2
CG31076
CG31075
TwdlC
Reg-2
CG13893
CG13699
Aps
DNaseII
CG7794
CG7785
cnn
cbs
CG7924
CG34244
CG7906
CG43206
CG31036
CG15517
CG15515
Eip74EF
slbo
MESK2
Vsx2
CG43880
Ugt37B1
CG13689
PNUTS
dbe
aru
tun
CG8249
CG12970
gol
RhoGAP100F
Rift
FeCH
bor
asun
ect
su(w[a])
TfIIA-S-2
CG14631
CG12398
fiz
CG14406
CG9512
rols
CG4822
CG2493
CG34274
Dsk
Ufl1
CG1943
slif
mtSSB
CG6126
CG31287
CG14974
CG10359
CG10357
Irk1
SCAP
CG14591
Tbce
Rab14
Pgant35A
l(2)34Fd
l(2)34Fc
CG43052
CG42354
CG42353
CG4293
Appl
pdgy
eag
CG9030
CG6839
CG14077
CG18223
mtd
Tim17b1
CG6123
CG6106
Gug
CG6983
Unc-115a
Unc-115b
p24-2
CG32939
CG18542
CG7276
CG7275
CG13455
CG12355
Zasp52
CG33465
CG15040
CG11873
hwt
Pde8
RSG7
salr
Pdp1
CG7329
CG44439
CG14760
CG5674
mthl8
otp
CAH15
Ppn
mIF2
pan
Obp99d
Obp99b
Dup99B
CG15506
CheA56a
CG30122
CG12061
CG8854
CG44437
Tom20
kug
Gabat
CG7668
CG12869
RpS28b
l(1)G0320
CG32700
CG7573
LManII
LManI
CG32107
CG10943
Hers
CG43271
alpha-Man-IIb
CG9593
pk
CG30384
psq
Drp1
Gbp2
CG43107
CG43103
Gbp1
Pex7
Arr2
CG34289
CG1632
ND-75
fred
CG9018
ACXD
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
2mit
mlt
Cyp318a1
Cyp311a1
CG7367
baf
CG34435
CG34434
Cp1
CG42806
PheRS-m
St4
CG18568
rdgC
ush
SP1173
CG43133
Dif
CG5043
CG33928
Eo
CG9503
dpr4
CG5062
CG43778
galectin
CG11374
Or49b
Cyp9h1
CG17575
antr
CG30486
ORY
CG34281
CG14327
CG14326
CG14324
CG14323
lectin-46Ca
CG34033
CG30001
pav
CG14997
ImpL2
Naprt
VhaAC39-2
unk
CG13829
CG9782
mbl
CG13566
CG16787
alpha-Catr
Fmo-1
Alas
CG34268
Poc1
CG10171
Raf
mRpL14
Rh5
Hacd1
Nfs1
CG18787
SLO2
CG12498
CG34417
alpha-Man-Ia
Gip
CG2909
CG43740
CG15306
CG12991
CG12992
vas
TfIIS
solo
ck
CG33679
CG33285
Pen
Cpr31A
CG33301
Eip63E
SteXh:CG42398
inv
CG32264
CG11659
CG11391
CG6300
CG11407
TMS1
fax
GluRS-m
Cyp6a18
TyrRII
CG14321
Pms2
QC
CG32413
CG13288
CG10486
Patj
dlt
CG12020
Cdc37
alpha-Spec
scaf
Cndp2
Rh50
Or67c
Tsp96F
swi2
CG9263
CG16853
CG16852
CG15638
gammaSnap2
ATPsynepsilonL
knk
aft
fab1
CG33981
Acp62F
htk
shop