ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100251 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◣ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Cib2
CG1354
CARPB
Pde1c
CycY
Obp99d
Obp99b
Dup99B
CG15506
ORY
kl-5
RapGAP1
CG31960
bark
HisRS
CG6470
Bx
Ggt-1
CG6481
Tpst
CG46311
CG32633
Sox100B
dco
CG3358
upd2
CG14974
CG10359
CG10357
Mef2
Wnt4
Gr89a
Decay
Cad89D
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Eip74EF
sbr
htk
shop
shep
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
CG33120
CG31752
CG10600
Aps
CG44439
CG14760
RpS21
CG3104
CG2991
Tak1
CG42579
InR
Sprn
CG5906
CG5568
CG18586
CG43693
CG34384
sgll
CG31473
CG2993
SteXh:CG42398
pkaap
crp
CG17329
scyl
CG12863
nrv2
CG43610
CG17376
Nc73EF
Cpr73D
pdgy
eag
CG9030
N
Lasp
Dab
CG43954
unc-5
snu
Sid
CG33346
Sox21a
ush
CG5674
CG14903
CG14891
phyl
Oaz
ben
Ste12DOR
CG13970
CG16721
Usp30
Toll-7
Zasp52
CG33465
CG4597
mthl14
E(bx)
His3.3B
fh
Bap111
CG43290
nxf4
CG31496
muc
CG8306
CG5089
CG14218
CG14204
CG14219
CCY
CG14947
CG13689
Ama
bcd
Ubr1
raskol
Eaat2
CkIIalpha-i3
CG13896
CG13895
SNF4Agamma
CG12398
Spn75F
fiz
CG14406
CG9512
DCX-EMAP
E(Pc)
goe
Twdlalpha
RpS28a
Mgat2
Axn
CG43291
CG9616
CG34028
HnRNP-K
CG11360
wcy
CG4955
CG4949
VhaAC39-2
unk
CG13829
Ptpmeg2
CG3106
Fancm
Myd88
Sytalpha
Oli
CG6870
grh
CG32295
Spn
tara
CG12535
CG42808
CG42807
CG12617
CG32264
shot
DJ-1alpha
stl
CycB
Tsp68C
Hml
CG8757
CG8750
sgg
CG3092
fred
wgn
CG4020
CG12236
SK
PDZ-GEF
CG6123
CG6106
Ir20a
His2B:CG33868
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
His1:CG33819
His1:CG33816
His1:CG33810
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
RagA-B
CG11970
CAHbeta
Npc2b
pHCl-1
CHES-1-like
CG15478
lectin-28C
CG14535
TwdlE
Men
SP555
CG14042
Sfp36F
CG5790
CG43362
ver
nst
Gcn5
eIF2beta
RpL37a
CG8112
mei-9
CG15579
TM4SF
CG4882
Dop1R2
Liprin-gamma
CG11298
Burs
Lmpt
CG9896
CG7573
Obp51a
velo
dikar
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His1:CG33813
His1:CG31617
His1:CG33852
His1:CG33807
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
His1:CG33801
His4:CG33869
His4:CG33881
His4:CG33879
His4:CG33877
par-1
CG33557
CG2990
TTLL4A
piwi
CG12253
Irk1
mtd
Tim17b1
Abd-B
CG10481
CG15615
CG43658
CG9304
Pex7
Arr2
out
CG34029
Adgf-E
alpha-Man-Ia
CG7329
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33870
His2B:CG33910
His2B:CG33902
His2B:CG33882
His2B:CG33876
His2B:CG33874
His2B:CG33872
Moe
S-Lap5
CG43058
CG34236
scpr-B
scpr-A
CG5214
CG17734
Obp56g
Pax
RtcB
CG13085
Alp12
CG13192
CG42268
Reg-2
CG13893
mRNA-cap
CG32599
CG32813
CG1434
Fbxl4
Snap25
His2A:CG33808
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
His2B:CG17949
RNASEK
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
His1:CG33834
bw
ppk3
TfAP-2
CG31191
Atpalpha
CG7956
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
CG8180
Gmap
CG34313
CG32832
CG31743
CG12498
CG12538
CG11788
CG10444
CG9143
spdo
waw
Sep1
bbx
CG11151
Grip91
Tango14
capt
CG5080
Bub1
Bsg25D
CG9220
SLO2
His4:CG33907
CG14439
Gbeta76C
CG8765
Aatf
AkhR
CG12106
CG12056
CG12057
CG12115
sov
His2A:CG33859
His2A:CG33856
His2A:CG33853
CG11883
ZnT77C
ND-39
CG32425
CG18281
CG12470
AANAT1
CG7460
Ste:CG33247
Ste:CG33245
Ste:CG33244
Ste:CG33239
Ste:CG33237
Ste:CG33236
Ste:CG33243
Ste:CG33242
Ste:CG33241
Ste:CG33240
Ste:CG33238
His1:CG33861
His1:CG33858
His1:CG33855
His4:CG33875
His4:CG33873
His4:CG33871
Stt3A
bves
SMSr
smid
CG33226
CG30287
CG30286
CG30283
caps
Mp
CG42354
CG42353
Nrt
galectin
CG11374
Chs2
sev
Pomp
ctrip
S
Atg4a
ast
RpL5
CG17490
CG13690
Loxl1
CG11334
CG11333
ebi
AP-2alpha
CG7458
Rubicon
CAH3
prage
Adar
mtSSB
CG6126
CG31287
Pif1
Pgant4
CG31776
abd-A
SNRPG
RpS19a
Rok
mthl1
Or67d
can
pyd
CG12926
GstT2
dia
Rhau
CG12426
Cul2
Cyp6t1
sced
CG9777
geminin
Opbp
CG3649
CG9826
kto
trc
CG32221
Oda
CG8860
CCT5
EndoG
CG32669
CG2202
CG17333
Eip63E
CG7741
ImpE2
Obp47b
CG42336
Ste:CG33246
CG43438
CG4438
Pp4-19C
CG15456
cactin
mal
CG11710
pzg
ppl
CG12974
Ist1
CG8549
su(w[a])
CG14630
Rpp21
Cdc45
Svil
beat-IIIc
CG31909
CG12009
RpS26
PK1-R
CG9920
CCHa1
Muc26B
CG31639
Hr78
Est-Q
CG43337
DNApol-eta
CG14562
Adhr
Adh
RpS7
CecA2
CecA1
Anp
intr
stg
SP1029
CG45544
CG43346
mAcon1
CG43345
CG31627
rtv
Lint-1
Dlic
vls
lok
barr
bwa
mbo
Gnmt
CG43630
Tif-IA
RpL21
Cyp313a4
CG8312
bocks
P58IPK
CG32816
Neurl4
Frl
CG6833
CG13484
sbb
Eip78C
Mvd
CG8944
CCT6
CG10887
GILT3
GILT2
eIF3d1
CG18754
CG16710
RpS28b
l(1)G0320
CG32700
CG15317
RpL37b
CG9876
CG42703
gammaSnap2
ATPsynepsilonL
knk
CG1724
omd
flfl
udd
Cul4
wus
CG2061
CG12702
Vago
CG2076
CG16786
snama
Sgt
cass
BicD
p47
CG11141
CG11127
Wsck
Syx18
atl
RhoGAP93B
CG7044
CG5745
CG14142
wls
Alg10
Adck5
l(2)10685
scra
CG1360
blow
Rack1
mts
Vps29
Tfb4
bor
asun
Maf1
CG32448
Ranbp21
Elys
Nopp140
CG7148
CG17145
CG6933
CG42673
CG8908
RpS18
plu
PCNA
otp
CAH15
DNaseII
CG7794
CG7785
CG13293
TMS1
fax
CG5897
tna
CG34274
frac
CG14837
Uba1
Yif1
CG6425
amon
VhaM9.7-b
Rpn10
ppk5
COX8
CG32110
RtGEF
La
CG6454
CG5746
mahj
PTP-ER
Patr-1
CG5220
CG3995
CG18213
CG33290
mRF1
CG9426
Sf3a2
CG42588
Ski6
CG16812
CG15480
TM9SF4
CG43376
Smyd4-1
adp
Urod
EMRE
Map60
CG5742
CG1827
Charon
CG4887
CG14341
RpL31
CG12929
Plap
CG31922
aux
jb
CG2911
Spec2
RpL13A
CG31551
l(1)G0004
Syx16
HERC2
CG18545
mRpS29
Dscam3
CG12592
CG46442
rad50
Gale
CG3402
Rev1
MED30
OdsH
cmet
cana
LysP
CG7367
RpL36A
Megf8
CCDC53
scpr-C
RpL3
CG6693
CG6689
CG17726
Mid1
RpL30
robl37BC
CG14220
RpS10b
sty
Obp18a
wda
CG13827
CG34268
Ptp61F
312
Cp1
CG42806
Nuak1
CG13699
Eip63F-1
CG15673
Rpn13
eIF4A
Jupiter
ifc
AGO1
CG15096
SLIRP1
anox
Dd
CG1486
CG6791
CG32369
CG17834
lmgB
lmgA
su(Hw)
RpII15
CG31321
Rpt6
CG1801
Phb2
mus312
mrva
CG42307
narya
lqfR
CG13855
CG13850
CG18870
clt
sky
inaD
RpL23
CG13531
CG9215
CG8097
CG7872
cerv
CG6180
CG15484
spict
CG5776
CG17036
Alp11
RpS9
CG3408
CG33703
CG33702
Spp
nAChRbeta3
lwr
Ets21C
zyd
qkr58E-3
qkr58E-2
qkr58E-1
Mes4
LysS
Strip
PHGPx
CG14961
Kyat
glo
COX5A
eIF3a
CG1074
srl
CG31525
Prosalpha1
CG30382
CG18853
Or43a
CG12822
Atg10
CG15772
lin-52
CG15771
EloC
RpL11
Arl6
Kdm4B
ValRS
teq
CG4942
Gnf1
Cdep
rut
srp
CG30424
CG2765
RpL19
CG3776
Phk-3
Cc2d2a
Patronin
eIF3b
Efhc1.1
Rhp
Paf-AHalpha
mRpS30
RpLP2
Cdk4
CG3662
dock
CG3862
Rlb1
Ras85D
HUWE1
CG9281
CG15601
rump
phr
CG30383
zip
uzip
TfIIA-S
tbrd-1
Pli
CG3638
CG11403
RPA2
Mtp
CG9272
BBS4
Vha44
Hmgs
eIF3f1
Fer2
mrj
CG5916
CG5903
spn-F
qless
mRpL32
CG1750
stmA
CG8740
CG42615
CG30356
Zdhhc8
BCL7-like
CG17343
CG10495
CAH6
CG11560
ssp
vers
Rab10
CG17068
pwn
Incenp
Br140
CG10702
CAH16
Shark
SdhBL
Flacc
CG45766
CecB
CG8252
Dhpr
bol
Use1
CG30349
CCT8
Rpt3
CG11122
SrpRalpha
CG44385
Ir11a
Idh3a
CoRest
CG14410
RIOK2
GlnRS
CG11891
CG11889
CG11858
CG10425
CG5554
gbb
eIF6
ytr
Toll-9
kin17
DNApol-alpha60
CG5665
Flo2
CG32590
CG14407
Pfdn5
CG5376
tHMG1
CCT1
CCT7
Pif1A
Pif1B
hng2
CG9839
Cpr67Fb
Gss2
Gss1
mnb
CG6788
Tgt
CG5126
CG5001
eIF3j
CG12134
CG13601
sba
Ndc1
CG31141
CG43999
CG43998
CG31142
CG1418
CG12133
CG4332
CG4318
CG12096
Bap60
Srrm234
RpL23A
RabX5