ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX749041 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◣ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

ORY
mtSSB
CG6126
CG31287
CG34384
sgll
CG31473
CG2993
Sox100B
dco
Sox21a
ush
CkIIalpha-i3
CG13896
CG13895
CG15615
gol
Mef2
unc-5
htk
shop
sbr
Cib2
snu
Sid
CG33346
CG34268
bor
asun
Tpst
CG46311
CG32633
Gpa2
CG7956
CG43693
CG10222
flr
RapGAP1
TfAP-2
Gr89a
Decay
Cad89D
CG8306
CG5089
nrv2
CG43610
CG17376
CG17377
InR
CG12986
CG14974
CG10359
CG10357
nej
pdgy
eag
CG9030
CG13280
mdy
CG12007
Npc2b
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
wgn
Tak1
CG42579
CG44439
CG14760
Wnt4
CG43290
nxf4
CG31496
CG31960
bark
CG13970
CG1354
CARPB
galectin
CG11374
CG43338
CG33557
CG2990
Prm
Fhos
CG13306
phyl
Oaz
Ama
bcd
Reg-2
CG13893
CG12009
PDZ-GEF
CG12863
CG31191
Atpalpha
Aps
CG3358
CG10365
nau
CG10232
vir-1
CG6405
CG6388
CG5446
Rrp46
Irp-1B
CG6345
kl-5
Ldh
CG31909
CG34281
CG14327
CG14326
CG14324
CG14323
stg
SP1029
CG45544
mtd
Tim17b1
DNaseII
CG7794
CG7785
Ptpmeg2
CG3106
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
CG33120
CG31752
CG10600
CG9171
CG33226
CG30287
CG30286
CG30283
Zasp52
CG33465
CG31275
Pde8
rtv
Lint-1
Dlic
pkaap
crp
CG17329
for
otp
CAH15
Sytalpha
Oli
CG6870
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
zyd
RagA-B
CG11970
CAHbeta
PGRP-LA
PGRP-LC
Syn2
Men
out
CG10481
CG13689
BBS4
CG32461
Mtpalpha
gcm
CG31709
TTLL4A
piwi
CG12253
CG43332
Pif1
Pgant4
CG31776
RpS11
CG8858
ham
CG31036
CG15517
CG15515
CG42354
CG42353
Svil
CHES-1-like
CG15478
retm
frj
Dys
CG15025
CG16721
Usp30
Abd-B
CG14762
cnn
cbs
shot
DJ-1alpha
Sfp84E
Os-C
CD98hc
CG6142
Nc73EF
Cpr73D
CG9896
Ubr1
lectin-28C
CG14535
TwdlE
ben
Ste12DOR
Indy
SrpRbeta
CG6511
CG32022
Obp99d
Obp99b
Dup99B
CG15506
ppk7
ppk14
CG9500
muc
TotX
CG7763
CG34054
CG30026
Gbs-76A
fal
HisRS
CG6470
Bx
Ggt-1
CG6481
raskol
Rsbp15
Cog1
CG4860
CG17404
CG12256
ome
CG43121
Eaat2
slbo
Rubicon
CAH3
SNF4Agamma
CG6118
Act88F
Spn28Da
CG7102
Spn28Db
siz
TfIIA-S
tbrd-1
Pli
Cyp12e1
Ptp61F
312
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
lace
TMS1
fax
GluRS-m
Osi1
CG1077
Cpr100A
CG15545
CG42495
upd2
CG34458
CG34457
TM9SF3
mthl2
Eaf6
mRpS33
CG31279
CG17565
CG14881
Tsp68C
Hml
CG8757
CG8750
RpS28a
Mgat2
Axn
Pex3
Pdi
CG32147
FucTA
lectin-46Cb
CG1648
CG1688
Alp13
CG7509
CG18808
CG32295
Spn
CG9220
LanB2
NLaz
CG31659
RpS26
CG42784
CG5213
VhaAC39-2
unk
CG13829
Pde1c
CycY
CG13192
sced
Dpit47
Adf1
Fancm
l(3)mbn
CG14903
CG14891
Tsp
Nhe3
CG11327
zip
uzip
CG9005
Gr98d
Gr98c
Gr98b
Lk
CG42758
CG34039
sm
CG42753
CG43277
CG18367
SCAP
CG14591
Tbce
Gp150
Usp47
DnaJ-1
CG5568
CG18586
CG13962
Lasp
Dab
CG43954
Myd88
CG9344
CG9313
CG34115
CG15650
CG15649
CG2493
stl
CycB
Pdp1
Son
Kap-alpha3
CG9399
CG9396
CG16790
CG34260
Prp31
Msh6
CG7011
CG6878
HnRNP-K
Eh
stc
CG15269
CG12617
abd-A
wcy
CG4955
CG4949
Wdr62
CG31663
CG15358
Pop2
Grip163
CG6928
CG8818
CG8569
CG33632
CG4020
CG12236
CG9988
CG10011
mthl14
E(bx)
RpLP2
Cdk4
CG5504
Sesn
CG46429
Alg3
MED8
CG8929
cpo
Rim
Cyp318a1
Cyp311a1
ftz-f1
Rlip
CG5697
CG34253
Cpr76Ba
Cpr76Bc
Cpr76Bb
pzg
ppl
CG12974
waw
Sep1
bbx
lectin-46Ca
CG34033
CG30001
eya
Ent2
CG9596
IFT52
COX5BL
COX5B
Lmpt
CG12926
GstT2
CG42268
N
Smyd5
Oga
Nelf-A
CG3337
RpS7
CecA2
CecA1
Anp
CecB
Got1
Asator
velo
SIFaR
dikar
Pms2
Ca-beta
Vm32E
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
Ufl1
CG1943
SP555
CG14042
nAChRalpha6
Fkbp59
CG4537
CG34183
scpr-B
scpr-A
CG5214
CG17734
CG4390
CG17193
mdlc
alpha-Man-Ia
Gip
CG2909
CG43740
CG15306
RpS21
CG3104
CG2991
cm
CG4593
CG42308
CG32736
CG3032
E(Pc)
CG34435
CG34434
Sec63
pst
CTCF
CG15040
CG5890
CG5886
CG14545
LSm7
glu
ChLD3
BuGZ
tzn
Spc105R
CG3698
Spn77Ba
Spn77Bb
CG10949
CG10947
Arpc2
Ufd1-like
NaPi-III
mRpL2
FoxK
CG13690
RpLP1
CG13692
CG11885
BBS8
Edg84A
Ccp84Ag
CG12853
ADPS
Lap1
Rgk3
ASPP
CG7458
pk
CG30384
dnt
CG13086
Poc1
CG10171
Fs
scb
PNUTS
dbe
aru
prage
Adar
RpL37a
OXA1L
galla-2
CG6409
Cpr67Fa1
fl(2)d
CG6329
CG13339
Tlk
Rala
CG4293
Appl
Vha13
Nup58
CG6195
CG31220
CG31219
PK1-R
CG9920
CCHa1
Toll-7
GILT3
GILT2
eIF3d1
CG18754
CG16710
jp
CG46468
brwl
Cp1
CG42806
PheRS-m
Pex7
Arr2
St4
CG18568
CG8728
CG34430
CG30380
CG30379
CG34431
Lerp
IntS12
His2Av
ball
SPARC
RpL37b
CG9876
CG42703
CG17450
GCS2alpha
tow
CG31406
CG18545
CG12592
rswl
Prp19
CG5189
CG30120
Snoo
CG7231
Pez
Cpr
shep
Cpr30B
CG17855
CG13113
CSN3
CG13255
CG11456
ver
nst
Gcn5
eIF2beta
CG1124
CG14218
CG14204
CG14219
Loxl1
CG11334
CG11333
His2B:CG33868
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
chas
Den1
CG8490
CG34021
CG3556
CG32264
CG30076
CG3527
CG11436
CG3546
CG11444
CheB93b
CheB93a
CG7907
CG33128
CG31928
CG31926
Chs2
CG4822
CG44666
CG43711
CG43710
CG43709
Ste:CG33247
Ste:CG33245
Ste:CG33244
Ste:CG33239
Ste:CG33237
Ste:CG33236
Ste:CG33243
Ste:CG33242
Ste:CG33241
Ste:CG33240
Ste:CG33238
CG10041
CG10038
chif
CG4455
CG42231
CG12398
fiz
CG14406
CG9512
SNRPG
RpS19a
Rok
mthl1
RSG7
rols
CG1850
Mbs
Diap1
RpIIIC53
mus304
CG7341
CG32195
Nepl18
Nepl17
RhoGEF64C
CG7514
CG18418
CG15876
axo
CG14270
CG10804
CG10803
CG10802
CG3638
CG11403
RpS28b
l(1)G0320
CG32700
His1:CG33813
His1:CG31617
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
His1:CG33819
His1:CG33816
His1:CG33810
His2B:CG33910
His2B:CG33902
His2A:CG33808
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
His2B:CG17949
par-1
Ist1
CG8549
Nepl16
CG34027
RhoGAP100F
Rift
FeCH
CG7381
Paip2
CG7091
RpI135
CG4213
SteXh:CG42398
mRNA-cap
CG32599
mud
tara
UGP
Pdxk
CG32040
CG32039
eIF5B
CG46463
armi
Bub1
Bsg25D
ebi
AP-2alpha
Gmap
caps
Rich
Ddx1
Csp
CG11523
pan
PIG-K
east
Sox102F
CG32117
CG12520
scyl
Nrt
CG11659
CG11391
CG6300
CG11407
CG43291
Ste:CG33246
CG9616
SMSr
smid
Jafrac1
goe
Twdlalpha
CG43778
Liprin-gamma
CG11298
beat-IIIc
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
CG8945
CG4991
CG16700
Ppn
mIF2
sev
CG7900
CG7910
Gss2
Gss1
CG40228
CG9304
CG34029
CG11360
TyrRII
CG14321
CG7747
Atg9
Cyp309a2
Sws1
Rad1
Cyp309a1
CG4438
CG8188
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33870
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His1:CG33801
Raf
mRpL14
Ntmt
CG46338
CG30010
CG5674
Lime
Argk
CG17698
CG4597
Eo
CG9503
Mo25
pyd
CG6123
CG6106
Obp56g
slif
prc
Muc68E
CG42397
CG14125
CG43896
CG32457
grh
hoe1
CG34028
TM4SF
CG4882
SK
sbb
CG12538
His1:CG33804
nAChRalpha3
CG8112
Obp18a
nrm
CG14947
firl
GstE12
CG3894
CG12848
CG3880
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
CG45491
CG45489
CG45492
CG45490
CG45486
CG7741
CG18336
dare
Obp47b
CG42336
sky
Pka-R1
CG46302
CG40439
Dhpr
bol
Use1
nwk
CG6052
CG15399
CG17290
CG13293
Spindly
IFT57
AGO3
Or43a
puc
Nf-YA
CG33926
Bet3
CG3529
ocm
udd
Cul4
CG4101
intr
CG34295
CG7017
CG13258
CG13465
BobA
CG43658
CG15556
Mp
Pax
Gycbeta100B
CG43980
Or67c
Snp
CG9018
ACXD
His3.3B
GlyP
CG4259
fh
Bap111
CG13501
CG13500
bs
Cpr67Fb
Lectin-galC1
lectin-37Db
lectin-37Da
dpr20
cindr
Drp1
Had2
Sprn
CG5906
mRpL55
CG6040
cdi
ATPsynD
salr
Dll
RPA2
Mtp
CG9272