ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474261 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◣ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ubr1
DCX-EMAP
capu
beat-IIIa
CG34106
CG31784
CG43693
mus304
RpIIIC53
CG7341
CG32195
Spn75F
CG31823
CG31821
CG5062
Cyp6a18
CG12398
fiz
CG14406
wcy
CG4955
CG4949
mbl
ORY
CG31145
Abd-B
sr
Mef2
galectin
CG11374
Eip75B
CG2841
pyd
osk
CG13465
BobA
GlyP
CG4259
CG3588
gsb-n
CG1354
CARPB
Sprn
CG5906
CCDC151
salr
Rh50
mub
CG43407
Acp76A
NLaz
CG31659
Sarm
CG42591
CG42590
Rubicon
CAH3
Nrt
CG5151
CG33285
shot
DJ-1alpha
Irk1
CG12863
Had2
CG7573
fl(2)d
CG6329
CG13339
CG15556
Gycbeta100B
CG9512
beat-IIIc
Pdp1
ftz-f1
Gss2
Gss1
mnb
CG12985
CG6788
CG1090
Fancm
CG31275
Nc73EF
Cpr73D
Nlg3
CG43759
sky
RPA2
Mtp
CG9272
CG43739
snu
Sid
CG33346
PK1-R
CG9920
CCHa1
chif
CG4455
CG42231
mtd
SmydA-4
CG31538
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
CG5674
can
Or67d
Oatp74D
CG6333
prage
Adar
Cib2
Jafrac1
caps
Got1
CG13023
CG11905
ap
MESK2
Tpst
CG46311
CG32633
Tlk
Rala
Acp62F
esn
Indy
Pop2
Grip163
CG6928
l(1)G0469
l(1)G0007
CG31787
yin
CG2930
lz
c11.1
CG6123
CG6106
Vha44
Hmgs
bru2
RpS21
CG3104
CG2991
CG34289
Drp1
Arpc5
prd
Smyd4-4
SkpB
CG18343
OSCP1
Hen1
sgg
CASK
CG9304
CG34029
wor
CG44869
CG10041
CG10038
N
Vha68-3
Vha68-2
mib1
CG34325
CG32572
Tak1
CG42579
bbg
CG42814
CG42813
CG14903
CG14891
BBS4
CG14416
Ptpmeg2
CG3106
fal
Gbs-76A
Alp13
CG14947
CG9692
CG3092
scyl
CG34112
CG9855
CG9853
CG14647
cindr
wts
dj-1beta
CG3527
CG11436
CG3546
CG11444
CG4020
CG12236
galla-2
OXA1L
CG6409
Cpr67Fa1
Fas3
SNF4Agamma
lectin-28C
CG14535
TwdlE
CG5897
eg
CG43895
vvl
CG12075
mthl14
E(bx)
Nedd4
Edc3
Rlip
CG5697
Exn
CG15414
RapGAP1
CG42747
ect
tou
ich
CG32295
Spn
CG3808
CG18135
pkaap
crp
CG17329
CG13258
l(2)10685
MFS3
trn
HP5
CG43155
CG13280
mdy
Lasp
Dab
CG43954
Pax
lectin-37Db
lectin-37Da
Lectin-galC1
Svil
Toll-7
ZnT77C
ND-39
CG32425
CG18281
Rrp46
Irp-1B
CG6345
Usp47
DnaJ-1
dnt
CG13086
CG33120
CG31752
CG10600
Mbs
Diap1
CG4822
Lmpt
CG9896
Myd88
Pif1
Pgant4
CG31776
CG5890
CG5886
CG14545
Galphao
CG12895
HisRS
CG6470
Bx
Ggt-1
CG6481
futsch
CG9344
CG9313
CG34115
CG15650
CG15649
stl
CycB
mRpS33
CG31279
CG17565
CG14881
CG8840
CG10949
CG10947
Arpc2
CG34260
svp
Gmap
Spat
CG42340
CG3918
CG3342
RpLP2
Cdk4
CG8311
CG9005
CG9932
CG17698
eIF3d1
GILT3
GILT2
CG18754
CG16710
scpr-B
scpr-A
CG5214
CG17734
Ent2
CG9596
IFT52
COX5BL
COX5B
Mp
egl
CG34105
CG13560
CG12491
CG11300
Aps
Cpr67Fb
CG17145
CG6933
Pde1c
CycY
otp
CG33144
mthl2
TM9SF3
Eaf6
Synd
CG31223
AdSS
CG10481
dco
Sox100B
LanB2
Sox21a
Dhap-at
CG5112
CG33494
Unc-115a
Unc-115b
p24-2
CG32939
CG18542
CG34274
CG16721
Usp30
Sfp36F
CG5790
CG43362
UQCR-Q
SecCl
QIL1
InR
zip
uzip
milt
CG9650
Ten-a
CG1142
CG8306
CG5089
vri
CG3662
PGAP2
Clp
CG15880
Saf6
Pex12
ush
CG13293
CG31191
Atpalpha
RpS28a
Mgat2
Axn
alpha-Man-IIb
CG9593
tbrd-1
TfIIA-S
Pli
Pms2
l(2)k05819
CG3652
Nuak1
CG3556
mRpL2
Ufd1-like
NaPi-III
FoxK
CG13689
mRpL14
Raf
Dif
CG5043
CG33928
betaTub60D
vir-1
CG6405
CG6388
CG5446
His3.3B
fh
Bap111
hts
tey
CG3358
Lk
CG42758
CG34039
CG42354
CG42353
CG32816
CG33970
CG12617
CG42268
per
HLH3B
CG2652
Lrr47
Fatp1
caup
CSN3
CG13255
CG11456
CG3288
unc-5
gcm
Mtpalpha
CG31709
nej
skd
CG10584
Pdss2
Sin
bun
E5
Pura
pyr
NetA
obst-H
CG42728
CG42729
CrebA
CG43248
par-1
CG31076
CG31075
TwdlC
CG12773
CG11417
png
E(Pc)
cnc
scny
Ppat-Dpck
Txl
CG10576
salm
Sccpdh2
Cyp9f2
DNAlig3
Cyp9f3
lectin-46Cb
CG1648
lectin-46Ca
CG34033
CG30001
Pex3
Pdi
CG32147
FucTA
Men
Tie
CG11353
mlt
KCNQ
CG31690
Nepl18
Nepl17
jing
Pde8
Asator
Prp31
Msh6
CG7011
CG6878
dve
CG8112
TMEM216
Cks85A
CG11760
CG32521
CG1494
CG33226
CG30287
CG30286
CG30283
mIF2
Ppn
CG34313
CG32832
CG31743
Cpr30B
CG17855
CG13113
nAChRalpha6
Fkbp59
CG4537
CG34183
mtDNA-helicase
Duox
CG3123
AdamTS-A
CG12853
ADPS
Lap1
Tsp96F
SppL
CG34172
CG10874
tsh
gammaSnap2
ATPsynepsilonL
knk
scaf
ems
CG13192
stumps
CG7987
CG44094
pk
Spn43Ad
Spn43Ab
Spn43Aa
CG12828
stj
Ugt303B2
Ugt303B1
CG12009
Mmp2
CG31140
GluProRS
AP-1sigma
kdn
ND-B16.6
CG3847
l(1)G0320
RpS28b
CG32700
Loxl1
CG11334
CG11333
rswl
Prp19
CG5189
CG30120
upd2
CG34268
Dll
CG42851
RtcB
CG13085
Alp12
PDZ-GEF
jp
brwl
CG46468
CG33798
Gug
CG6983
rn
CG42544
Gbp2
CG43107
CG43103
Gbp1
Pde11
dsx
CG1688
aux
aralar1
CG2224
CDase
Obp99d
Obp99b
Dup99B
CG15506
CG34296
RpL7
Ripalpha
CG34159
Sur
orb
Cdc16
CG6763
Oda
CG34232
CG13177
SmD3
RhoGAP100F
Rift
FeCH
sdt
mthl1
SNRPG
RpS19a
Rok
CG9777
velo
Ist1
CG8549
Pez
Cpr
Tim17b1
beta3GalTII
Gle1
Vps25
CG10348
sced
Dpit47
Adf1
kl-5
CG13872
side-VIII
pyx
CG33229
nos
CG5835
CG11779
cib
brn
Xpac
CG6379
CG15375
QC
CG32413
CG13288
CG10486
DNApol-epsilon58
CG5592
CG32409
CG31406
jumu
RhoGEF3
CG13135
CG13707
Smyd5
Oga
Nelf-A
CG3337
CG3625
CG11601
Amnionless
pst
Sec63
CTCF
CG11873
SP1173
CG8519
ham
Eh
for
nrv1
CG32264
cv-2
CG10795
SCaMC
Prm
Fhos
CG13306
RpS11
CG8858
CG7763
CG34054
CG30026
fz4
CG15403
rdo
elfless
CG42659
CG42635
CG42634
CG31740
mam
CG18371
CG42808
CG42807
fru
tzn
Spc105R
CG3698
tow
htk
plx
Rab23
dbe
aru
PNUTS
Trc8
CG12498
tai
NKCC
Gli
CG3793
rasp
CG15812
ND-30
Alp6
CG3494
CG3492
CG16837
Bub1
Bsg25D
CG6903
CG4041
Mccc1
Acf
Dys
rpk
Dlip2
Karybeta3
betaCOP
Tsf1
Top1
dah
CG34347
RpL37a
retm
frj
CG4597
Vsx1
CG7509
CG18808
CG33128
CG31928
CG31926
CG31661
shn
CG13229
Men-b
CG6051
CG9331
CheB38c
CheB38a
CheB38b
stc
CG15269
abd-A
CG17470
Sfp38D
CG31680
CG17472
EcR
stg
SP1029
CG45544
nrv2
CG43610
CG17376
CG17377
Fas1
CG14905
bif
Vlet
primo-2
primo-1
kmr
CG31469
Ubc87F
cm
CG4593
CG42308
CG32736
CG3032
Syx6
CG9084
CG7737
CG13962
fzo
Golgin84
CG5762
CG33340
CG33339
CG18528
CG17784
C15
muc
Ca-beta
Vm32E
Kdm2
Nmdmc
Mst85C
E2f1
daw
Syt1
wit
Faa
CG32259
Glut4EF
CG34460
Ser
CG17350
fon
kon
CG6006
Dyrk2
Myo61F
wg
sturkopf
Herc4
CG9184
Dad
CG3036
CG15625
Psc
CG13690
ebi
AP-2alpha
Son
Kap-alpha3
CG9399
CG9396
CG16790
vg
Nmda1
AspRS
RpS7
CecA2
CecA1
Anp
CecB
RpLP1
CG13692
CG11885
BBS8
CG12869
JYalpha
cnn
cbs
mts
Rack1
CG8818
CG8569
CG33632
CG32982
so
numb
pdm2
CG3769
RpS28-like
CG33723
ths
Ir48c
sbr
CG6154
Ald1
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
grn
CG2493
pdm3
Gp150
Cp1
CG42806
PheRS-m
Rpn13
hdc
CG31869
CG13527
phyl
Oaz
EndoU
CG45105
Cln7
qm
Srp19
CG14834
Trl
CG42507
Nmdar1
CG43845
CG14610
Fer1
Spt-I
GLaz
AGBE
CG33137
Uch-L5
Jarid2
zf30C
Taf11
und
CG8230
babo
Tom7
CG8229
CG33199
CG4496
Naprt
CG32266
GlyT
CG4797
DAAM
CG32811
glob1
spz
CG43935
lace
l(2)34Fd
l(2)34Fc
Rab14
Pgant35A
CG43052
shep
CG7991
Poc1
CG10171
CG14110
Hr38
shop
CG15025
Snoo
CG7231
prel
Pdk
CG13955
ss
CG34459
bib
Pdk1
slow
DopEcR
CG32240
Gnf1
Cdep
rumi
Usp12-46
CG7029
Rich
Ddx1
Csp
CG11523
CG31729
CG16824
Uvrag
Drep4
CG30069
Ama
bcd
opa
CG13907
Usp10
ball
Lerp
IntS12
His2Av
SPARC
glu
LSm7
ChLD3
BuGZ
cdc14
LanB1
CG13868
tapas
CG13871
Hr3
CG46321
slbo
bs
CG5504
Sesn
CG46429