ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671941 | 5-13h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◣ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

ORY
kl-5
Sox21a
CG34384
sgll
CG31473
CG2993
CkIIalpha-i3
CG13896
CG13895
Cib2
CG34268
ush
CG14974
CG10359
CG10357
dco
Sox100B
CG44666
CG43711
CG43710
CG43709
CG1354
CARPB
RapGAP1
Mef2
CG12007
CG43438
Stam
aurB
bor
asun
CG43658
TfAP-2
CG3358
CG44439
CG14760
Wnt4
Ama
bcd
mtSSB
CG6126
CG31287
CG11360
InR
CG43693
CG8306
CG5089
CG43290
nxf4
CG31496
Ldh
otp
CAH15
Pif1
Pgant4
CG31776
Muc26B
CG31639
pst
Sec63
CTCF
Gr89a
Decay
Cad89D
Aps
unc-5
snu
Sid
CG33346
sbr
CheA84a
His2B:CG33868
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
His1:CG33819
His1:CG33816
His1:CG33810
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
nrv2
CG43610
CG17376
mtt
CG33120
CG31752
CG10600
htk
shop
CCY
rdx
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33870
His2B:CG33910
His2B:CG33902
His1:CG33801
His2B:CG17949
beat-IIa
fdl
lectin-28C
CG14535
TwdlE
CG31909
DNaseII
CG7794
CG7785
GluRIA
CG30389
CG15657
CG33309
CG17636
Or69a
Tpst
CG46311
CG32633
CG31275
Prm
Fhos
CG13306
CG7956
CG13689
rut
AGO3
CG8112
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His1:CG33852
His1:CG33807
His1:CG33804
bark
CG31960
His4:CG33869
His4:CG33881
His4:CG33879
His4:CG33877
CG34028
cpo
SteXh:CG42398
vir-1
CG6405
CG6388
CG5446
fz
CG42810
CG42809
Tak1
CG42579
Snoo
CG7231
GstE12
CG3894
CG12848
puc
CG3880
His2A:CG33808
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
CycE
CG7741
CG18336
dare
Obp47b
CG42336
RpS28a
Mgat2
Axn
His2B:CG33882
His2B:CG33876
His2B:CG33874
His2B:CG33872
His4:CG33907
CG15200
sls
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
Obp99d
Obp99b
Dup99B
CG15506
CG31674
EMC4
Spn38F
Oseg5
CG31676
CG33170
CG33169
Arf79F
smid
SMSr
CG44623
plh
CG46302
CG40439
CG40472
CG34031
OdsH
Liprin-gamma
CG11298
Or67a
CG33700
CG7763
CG18518
CG12538
CG3649
CG9826
Trf4
Cul2
CG33128
CG31928
CG31926
SCAP
CG14591
Tbce
CG18063
prc
Muc68E
CG42397
Dop1R2
CG14125
SK
nrm
CG43291
CG9616
CG34196
CG4438
Maf1
pb
CG10887
Hsp60D
Hacd2
Dscam3
Or82a
CG42402
Gnpnat
CIA30
CG7601
CG5084
CG10910
NT5E-2
CG43110
CG30103
CG4587
CG33643
CG33644
CG33641
CG33642
CG33640
term
CG12426
5-HT2B
CG9254
His1:CG33834
Cyp6a21
Cyp6a8
unc-13
zen2
Cyp12a5
Cyp12a4
shot
CG42788
CG6912
Eip78C
CG3984
brat
stw
for
Obp56g
CG34274
Muc68Ca
CG43896
Ppr-Y
cic
CG9400
CG14693
RpS2
CG3520
Muc30E
Tim23
Gpb5
CG32816
hoe2
Sgs1
CG14044
CG7548
CG4080
CG8539
Cyp4d8
CG12362
CG4613
CG17290
Ir11a
CG10949
CG10947
Arpc2
CG14947
His2A:CG33859
His2A:CG33856
His2A:CG33853
His1:CG33861
His1:CG33858
His1:CG33855
His4:CG33875
His4:CG33873
His4:CG33871
AGO2
MFS9
TwdlV
CG13473
Set1
CG10417
CG40045
CG42673
CG12679
ab
Ent1
sky
spdo
CG7638
CG34012
CG32073
CG12522
Elo68beta
Elo68alpha
CG32071
Mob2
CG7394
CG46412
CG33267
jing
nompC
CG12512
Abd-B
DJ-1alpha
Rubicon
CAH3
CG32295
Svil
Spn
N
CG12863
CG10481
Ptpmeg2
CG3106
CG16721
Usp30
Pde8
CHES-1-like
CG15478
Pde1c
wgn
mRpS33
Indy
CG31279
CG17565
CG14881
prage
Adar
CycY
Nc73EF
Cpr73D
CG12986
pkaap
crp
CG17329
CG33226
CG30287
CG30286
CG30283
stl
CycB
slbo
lace
Ubr1
nej
wcy
CG4955
CG4949
RpS21
CG3104
CG2991
CG4020
Tsp68C
Hml
CG8757
CG8750
CG12236
CG14762
Dys
CG31191
Atpalpha
nAChRalpha6
Fkbp59
CG4537
CG34183
lectin-46Cb
CG1648
PDZ-GEF
siz
mthl14
E(bx)
Fancm
SNF4Agamma
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Lasp
Dab
CG43954
CG9171
CG34260
CG15025
beat-IIIc
l(3)mbn
fal
Gbs-76A
CG13192
CG14903
CG14891
Toll-7
gol
eIF3d1
GILT3
GILT2
CG18754
CG16710
rtv
Lint-1
Dlic
CG1688
LanB2
Npc2b
Wdr62
CG15615
Got1
Tlk
CG31663
CG15358
ind
Eaat2
zip
uzip
CG3527
CG11436
CG3546
CG11444
CG43338
CG13280
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
sced
mRpL2
Ufd1-like
NaPi-III
FoxK
RpS11
CG8858
Eh
ham
CG10365
CG13962
stg
SP1029
CG45544
CG13258
Dpit47
Adf1
nau
CG10232
scpr-B
scpr-A
Pop2
Grip163
CG6928
CG5214
CG17734
stc
CG15269
Rrp46
Irp-1B
CG6345
Asator
mdy
CG5890
CG5886
CG14545
CG13465
BobA
RpL37a
Spn28Da
CG7102
Gp150
CG6118
Act88F
Spn28Db
Myd88
NLaz
CG31659
CG17377
CG9344
CG9313
CG34115
CG15650
CG15649
HisRS
CG6470
Bx
tbrd-1
TfIIA-S
Pli
CG12617
abd-A
Ggt-1
Syn2
Cpr100A
CG15545
CheB93b
CheB93a
CG7907
CG6481
CG9005
Ent2
CG9596
CG10222
IFT52
COX5BL
COX5B
ftz-f1
CG14270
CG10804
CG10803
CG10802
flr
raskol
Tsp
lectin-46Ca
CG34033
CG30001
Lk
CG42758
CG34039
ball
Lerp
IntS12
His2Av
Nhe3
CG11327
caps
CG12009
Usp47
DnaJ-1
SPARC
CG42268
Rim
cm
CG4593
CG42308
CG32736
CG3032
CG12853
ADPS
Cyp12e1
CG15556
phyl
Oaz
Bub1
Bsg25D
Mp
glu
LSm7
ChLD3
BuGZ
scyl
Lap1
CG42354
Pax
Ca-beta
CG13293
Cpr76Ba
Cpr76Bc
Cpr76Bb
Jafrac1
Rlip
CG5697
dnt
CG13086
gcm
Mtpalpha
CG31709
par-1
CG8818
CG8569
CG33632
Rala
CG13690
Vm32E
CG42495
mRpL14
Raf
E(Pc)
CG33557
CG2990
Gycbeta100B
pdgy
eag
CG9030
CG43980
Eglp2
RagA-B
CG11970
CAHbeta
Men
Loxl1
CG11334
CG11333
Lmpt
CG43332
mthl2
TM9SF3
Eaf6
ome
CG43121
Reg-2
CG13893
Or67c
RpLP1
Ptp61F
Pex3
Pdi
CG32147
FucTA
Lsd-2
CG5568
CG18586
312
Pez
Cpr
tzn
Spc105R
CG3698
RpLP2
TotX
pzg
ppl
CG12974
CG9065
CG5599
CG33178
CG33177
CG15027
mRpS18C
CG2218
CG15536
CG15535
CG15533
Cdk4
CG10041
CG42740
CG2217
mtd
CG4293
Appl
Snp
CG10038
CG9018
ACXD
His3.3B
GlyP
CG4259
Sfp84E
Os-C
CD98hc
fh
Bap111
CG13501
CG13500
CG3556
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
Pdp1
SrpRbeta
CG6511
CG32022
Ufl1
CG1943
Rich
Ddx1
Csp
CG11523
shep
CG42353
RpS26
Nrt
Osi1
Sytalpha
Oli
CG6870
velo
CG1077
Smyd5
Oga
Nelf-A
CG3337
CG7509
CG3638
CG11403
Cpr30B
CG17855
CG13113
SIFaR
galla-2
OXA1L
CG6409
Cpr67Fa1
CG13970
fl(2)d
CG6329
CG13339
bs
Rsbp15
Cog1
CG4860
CG17404
CG12256
CG5504
retm
frj
CG34281
CG14327
CG14326
CG14324
Poc1
CG10171
TyrRII
Cpr67Fb
CG14323
Sesn
CG46429
Alg3
Prp31
Msh6
CG7011
CG6878
CSN3
CG13255
CG11456
lectin-37Db
lectin-37Da
Lectin-galC1
CG15040
sm
PGRP-LA
CG14321
Fs
PK1-R
CG9920
CCHa1
Alp13
scb
dpr20
Zasp52
CG33465
mthl1
SNRPG
RpS19a
Rok
RpL37b
CG9876
CG42703
cindr
CG18808
ppk7
ppk14
CG9500
pan
CG9220
jp
brwl
CG46468
Drp1
upd2
CG32264
waw
bbx
Sep1
CG42784
Mbs
Diap1
Had2
dbe
aru
PNUTS
rswl
Prp19
CG5189
CG30120
Ist1
CG8549
mIF2
east
Ppn
PIG-K
Sprn
CG5906
CG9988
CG10011
mus304
RpIIIC53
mRpL55
cdi
CG6040
ATPsynD
salr
Dll
CG13692
CG11885
BBS8
mRNA-cap
CG32599
CG7341
CG32195
mud
ebi
AP-2alpha
Son
Kap-alpha3
CG9399
CG9396
CG16790
RpS7
CecA2
CecA1
Anp
CecB
PGRP-LC
Cp1
Tim17b1
CG42806
CG5213
CG6142
RPA2
Mtp
CG9272
RtcB
CG13085
Alp12
can
Or67d
CG43739
PheRS-m
CG9304
CG4390
CG17193
alpha-Man-IIb
mdlc
Pex7
Arr2
CG42851
Vha13
Nup58
CG6195
CG31220
SP555
CG14042
CG12398
CCDC151
St4
CG18568
wdp
Sox102F
CG9593
su(w[a])
ver
nst
eIF2beta
Gcn5
Gug
CG31219
Spn75F
TfIIA-S-2
CG14631
Vsx2
dikar
CG42753
CG6983
CG43277
CG18367
Rgk3
ASPP
CG9896
CG5819
out
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
CG34054
CG30026
Galphao
CG12895
fz4
HnRNP-K
piwi
TTLL4A
CG12253
CG34435
CG34434
SP1173
CG2493
galectin
CG11374
cnn
cbs
kug
Tom20
Gabat
CG7668
CG43206
Chs2
CG34029
CG31036