ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474253 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◣ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG5062
wcy
CG4955
CG4949
CG1354
CARPB
Ubr1
CG43407
Acp76A
sr
salr
Cib2
gsb-n
mib1
GlyP
CG4259
wor
CG44869
Abd-B
vvl
Rubicon
CAH3
mRpS33
CG31279
CG17565
CG14881
fl(2)d
CG6329
CG13339
galectin
CG11374
CG34112
CG9855
CG9853
CG14647
ftz-f1
CG5151
Toll-7
CG13465
BobA
CG3662
PGAP2
Clp
CG15880
Saf6
Pex12
Pdp1
sgg
Pde1c
CycY
CG9896
Lasp
Dab
CG43954
JYalpha
Tlk
Fas3
Myd88
Nc73EF
Cpr73D
CG43693
stl
CycB
ZnT77C
ND-39
CG32425
CG18281
Svil
caps
CG3808
CG18135
mRpL2
Ufd1-like
NaPi-III
FoxK
ORY
Vha44
Hmgs
Drp1
Arpc5
mub
RpS21
CG3104
CG2991
shot
DJ-1alpha
CG10041
CG10038
MESK2
prd
CG14947
bun
HisRS
CG6470
Bx
Ggt-1
CG6481
Ptpmeg2
CG3106
primo-2
primo-1
kmr
CG31469
Ubc87F
lectin-28C
CG14535
TwdlE
svp
mthl14
E(bx)
mtd
CG31538
CG13192
Mef2
NLaz
CG31659
CG10949
CG10947
Arpc2
CASK
scpr-B
scpr-A
CG5214
CG17734
alpha-Man-IIb
Irk1
CG34172
CG10874
scyl
Tpst
CG46311
CG32633
pkaap
crp
CG17329
CG13258
CG12398
fiz
CG14406
CG33120
CG31752
CG10600
N
CG34268
CG3358
l(2)10685
MFS3
pk
Spn43Ad
Spn43Ab
Spn43Aa
CG12828
kl-5
Lmpt
CG12863
Had2
CG4020
CG12236
InR
par-1
esn
Usp47
DnaJ-1
RpLP2
Cdk4
mus304
RpIIIC53
CG7341
CG32195
CG8311
Smyd5
Oga
Nelf-A
CG3337
sky
RPA2
Mtp
CG9272
CG43739
Dll
Nrt
CG31275
Synd
CG31223
AdSS
CSN3
CG13255
CG11456
Got1
unc-5
Dhap-at
CG5112
CG33494
CG34313
CG32832
CG31743
vri
RpS28a
Mgat2
Axn
lz
c11.1
Pez
Cpr
eIF3d1
GILT3
GILT2
CG18754
CG16710
ap
capu
CG31522
Gmap
stc
CG15269
egl
CG34105
CG13560
CG12491
CG11300
CG3588
Fancm
Rrp46
Irp-1B
CG6345
dnt
CG13086
stg
SP1029
CG45544
velo
Ist1
CG8549
Aps
Cpr67Fb
Oatp74D
CG6333
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Dif
CG5043
CG33928
CG15403
mthl2
TM9SF3
Eaf6
CG32295
Spn
gcm
Mtpalpha
CG31709
pyd
osk
Mbs
Diap1
CG9344
CG9313
CG34115
CG15650
CG15649
nAChRalpha6
Fkbp59
CG4537
CG34183
PK1-R
CG9920
CCHa1
E(Pc)
l(1)G0469
l(1)G0007
galla-2
OXA1L
CG6409
Cpr67Fa1
Sarm
CG42591
CG42590
CG13690
RpLP1
CG13692
CG11885
BBS8
Sprn
CG5906
CCDC151
Indy
lectin-46Cb
CG1648
lectin-46Ca
CG34033
CG30001
Pex3
Pdi
CG32147
FucTA
chif
CG4455
CG42231
CG3527
CG11436
CG3546
CG11444
CG17698
Ent2
CG9596
IFT52
COX5BL
COX5B
Rich
Ddx1
Csp
CG11523
Rlip
CG5697
CG31191
Atpalpha
CG9650
CG42814
CG42813
dco
Sox100B
rswl
Prp19
CG5189
CG30120
Nedd4
Edc3
CG16721
Usp30
Prp31
Msh6
CG7011
CG6878
Gss2
Gss1
mnb
CG12985
CG6788
Pif1
Pgant4
CG31776
Acp62F
beat-IIIc
ball
Lerp
IntS12
His2Av
SPARC
CG31140
GluProRS
AP-1sigma
ush
muc
Cyp6a18
prage
Adar
zip
uzip
Pop2
Grip163
CG6928
dsx
tbrd-1
TfIIA-S
Pli
eg
CG43895
Rala
CG9593
CG9932
upd2
CG1688
betaCOP
Tsf1
Awh
sced
Dpit47
Adf1
CG2841
Obp99d
Obp99b
Dup99B
CG15506
His3.3B
fh
Bap111
Pde8
dbe
aru
PNUTS
CG5890
CG5886
CG14545
RhoGEF3
mIF2
Ppn
dikar
fru
mam
CG18371
Loxl1
CG11334
CG11333
vir-1
CG6405
CG6388
CG5446
CG12581
fal
Gbs-76A
CG34460
Reg-2
CG13893
RpL7
Ripalpha
CG34159
Sur
LanB2
DCX-EMAP
RpS11
CG8858
CG34325
CG32572
CG31076
CG31075
TwdlC
Lim1
Pms2
SmydA-4
CG33144
jim
CG45428
CG11226
stw
CG1142
CG14903
CG14891
Kdm2
Nmdmc
Mst85C
tzn
Spc105R
CG3698
CG42495
dpr16
snu
Sid
CG33346
CG8818
CG8569
CG33632
CG12617
mRpL14
Raf
CG33958
CG33285
CG9005
Atf3
cv-2
CG10795
nej
Sox21a
cm
CG4593
CG42308
CG32736
CG3032
fz4
Jafrac1
CG8306
CG5089
shn
CG13229
Tet
nord
RhoGAP100F
Rift
FeCH
pnt
DNApol-epsilon255
pyx
CG33229
Nmdar1
CG43845
Cln7
qm
Srp19
CG14834
Bub1
Bsg25D
SrpRbeta
CG6511
CG32022
Gug
CG6983
CG12075
tey
Ca-beta
Vm32E
nrv1
CG9331
CheB38c
CheB38a
CheB38b
Trf2
lawc
PIG-T
Hr3
CG46321
ich
CG6123
CG6106
CG5504
Sesn
CG46429
Alg3
zld
Top1
dah
dve
cindr
CG9304
CG34029
wts
dj-1beta
Mccc1
Acf
tara
can
Or67d
GstD4
GstD3
GstD2
GstD9
GstD1
GstD10
Tim17a1
CG32521
CG1494
CG13280
mdy
NetA
nrv2
CG43610
CG17376
CG17377
CG4822
Nepl18
Nepl17
CG13689
Wdr62
CG31663
CG15358
rn
CG42544
Ids
CG12012
Vha13
Nup58
CG6195
CG31220
CG31219
SCAP
CG14591
bi
CG42354
CG42353
cib
brn
Xpac
CG6379
CG15375
cort
Spn27A
Nse1
CG34310
Galt
mRpS18C
CG2218
CG15536
CG15535
CG15533
CG42740
CG2217
numb
CG3769
RpS28-like
CG33723
CG3092
fray
CG7694
Prm
Fhos
CG13306
Exn
CG31145
Pax
lectin-37Db
lectin-37Da
Lectin-galC1
Act5C
C15
CG33226
CG30287
CG30286
CG30283
PDZ-GEF
Oda
CG34232
CG13177
SmD3
glu
LSm7
ChLD3
BuGZ
CG13868
tapas
CG13871
SNF4Agamma
Poc1
CG10171
CG14110
Mitf
betaTub60D
CG43759
ss
milt
Fas1
CG14905
Cp1
CG42806
PheRS-m
Rpn13
CG12009
CAP
rasp
CG15812
ND-30
slbo
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
CG34347
jp
brwl
CG46468
CG34289
CG42747
CG34260
CG12853
ADPS
Lap1
E5
Pgk
Bacc
CG10481
yin
CG2930
Lk
CG42758
CG34039
repo
mthl1
SNRPG
RpS19a
Rok
CG9777
CG32816
beta3GalTII
Gle1
Vps25
htk
shop
rols
bor
asun
Unc-115a
Unc-115b
p24-2
CG32939
CG18542
kon
ham
SP1173
Moe
CG31690
Wnt4
tsh
tun
CG8249
CG12970
CG2493
Tak1
CG42579
CG5674
Myo61F
sturkopf
Herc4
CG9184
ebi
AP-2alpha
skd
CG10584
Pdss2
Antp
Sin
HP5
CG43155
opa
Ugt36A1
CG15418
pdm3
CG15556
Gycbeta100B
cdc14
LanB1
pst
Sec63
CTCF
Sgs8
Sgs7
Sgs3
CG7512
CG33500
CG33272
RpS7
CecA2
CecA1
Anp
CecB
RapGAP1
per
HLH3B
CG2652
yem
Ctl2
Atxn7
Eogt
side-VIII
CG3609
CG3597
CG15390
Drgx
CG11873
CG12007
Trc8
CG6891
CCKLR-17D3
Alp13
PIP4K
E2f1
HmgD
HmgZ
NKCC
CG43980
CG43796
CG13088
CG43400
Pepck2
Pepck1
CG45087
Rgk2
Lrr47
Fatp1
ana
St4
CG18568
Eip63E
nos
CG5835
CG11779
Son
Kap-alpha3
CG9399
CG9396
CG16790
CG42663
wuc
CG42268
Ufl1
CG1943
daw
Syt1
Tsp96F
SppL
phyl
Oaz
CG31909
RpL37a
Pcf11
Cyp6a23
Cyp6a22
Cyp6a17
RtcB
CG13085
Alp12
kay
Patj
dlt
alpha-Spec
Cdc37
CG12020
psq
CG3556
Spn75F
beat-IIIa
CG34106
CG31784
mtSSB
CG6126
CG31287
fs(1)Ya
dwg
vilya
wdp
CG5819
rpk
Dlip2
Karybeta3
Rh5
Hacd1
Nfs1
CG18787
sdt
Eip74EF
ect
tow
Spindly
IFT57
twi
CG42741
sim
Syx6
CG9084
CG7737
Ldh
Pen
Cpr31A
CG33301
CG32264
CG32246
Doc2
l(1)G0320
RpS28b
CG32700
Or59a
CG43795
hts
waw
bbx
Sep1
Glut4EF
retm
frj
CG13023
CG11905
px
gas
Tsp
CG31183
zf30C
Taf11
und
CG31406
jumu
CG7509
CG18808
rumi
Usp12-46
CG7029
spirit
CG12111
CG12065
CG15414
mlt
Dys
bnl
CG31459
fax
TMS1
GluRS-m
Start1
Fcp1
CG3511
spn-F
qless
mRpL32
CG1750
CG4496
Men
trn
fne
dnc
Sox14
PPP1R15
Asator
CG6903
CG4041
scra
blow
CG1360
CG1090
CG4914
ATP8B
CG8111
CG32368
CG8281
pbl
Mmp2
CG1421
CG11629
Phlpp
l(2)37Bb
Rpn3
CG10492
Tim17b1
Idh3a
CoRest
mbl
Eh
Moca-cyp
18w
pdm2
alpha-Cat
ND-MLRQ
Rpi
Mthfs
CG9875
CG3500
CG34423
CG8170
CG1146
Rgk3
ASPP
Snoo
CG9171
Mob2
Tsp3A
Seipin
bbg
MEP-1
CG42245
Pxn
CG9018
ACXD
CG30069
AdamTS-A
Akap200
CG13398
CG13397
cnn
cbs
CG17078
smo
mbm
CG11555
Mes2
caup
Gp150
Elp1
Csk
msn
dos
RpL8
mRpL55
cdi
CG6040
ATPsynD
grn
pyr
CG9220
twz
pnut
Rpp25
Tdc1
CG15909
CG5953
rt
CG7377
CG33269
CG33268
CG32086
futsch
Lar
CG10268
Hakai
PCNA2
CG10366
spi
msb1l
for