ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220467 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◣ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

TINAGL1
C2CD4D
NOXO1
CDYL
SH3KBP1
GPSM3
KLK6
PCDH1
SLC35A5
ATG3
PPDPF
LAMB3
SLC5A1
RBM7
C11orf71
ETNK1
MTF2
TP53BP2
KCNH8
SNAP29
PI4KA
FRMD5
PLEKHG4
UNKL
CFDP1
PDE8A
XRRA1
SPCS2
TMPRSS3
CYP2R1
ADAP1
MTBP
MRPL13
SPTBN1
PSMD14
ACSS1
THOC1
HECTD2
ECPAS
SEPTIN9
RB1
PLPP2
RASEF
RABGEF1
EFR3A
NWD1
RAB33B
PELI1
ZNF609
STXBP3
SLBP
H3C6
LEPROT
LEPR
FOXA2
ITGA6
ETV4
PELATON
ZNHIT1
PLOD3
FMN1
DENR
STK32C
LRRC27
NPL
ANLN
ZFP36L2
PAQR4
ECHDC2
LSR
OBP2B
CCDC200
FGFR4
ATAD2
POLG
ARHGEF38
OGA
ZNF862
GGNBP2
DNAJA4
TLE3
EFNA4
BICD2
TTC30B
SDHAF1
SH3TC2
TES
RTKN
NFE2
ZNF572
XKR8
USP3
ACAP2
CCDC12
TMCC3
TRIM47
WDR74
SUPT20H
NPNT
LDHA
MAN1A2
CPSF4L
SDHC
PDP1
POR
SHOC2
BBIP1
MIA
RBM39
SMC4
IFT80
SETX
CLDN3
MYH14
PTK2
ETV6
MAPK14
PAQR6
ZFAND4
PLOD2
SMYD3
CAVIN1
RNF169
TMEM168
AAR2
CCN2
TACSTD2
RCC2
BTG1
SLC16A3
DTNB
COA1
ZNF473
VRK3
FOXO1
MET
DNAJC14
ZSCAN2
FZD6
ZBTB38
COBLL1
ITGA2
NF2
MVB12A
LRATD2
UTP23
TYMP
SPATA5L1
GATM
CALR
TTC23L
NCOA5
IQCH
AAGAB
TMEM209
ABTB2
LIMCH1
C17orf58
SLC35E2B
RRBP1
FAM227B
DTWD1
PPP6R1
PPIC
CAPS2
FAM91A1
STXBP2
RTN4RL2
LIPG
CRY1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FNDC3A
DOCK9
LHPP
ABCD3
UGGT2
SMARCD2
TATDN1
NDUFB9
NDUFB2
CDC42BPG
PIGBOS1
PIGB
WDR93
PEX11A
PFDN4
LMO7
TUBGCP5
FBLIM1
SLC35B4
GBA
USP15
PAIP2B
MCIDAS
CALM2
SBF2
DBP
FSIP1
BCL2L11
ZCCHC4
PIP4K2B
TMEM39A
WDR61
OGT
ALOX5
RHOBTB3
SPATA9
KANSL3
PBX3
LZTS3
SHKBP1
RNF135
SLC44A1
ARHGEF17
HSPA6
ASCL5
MEMO1
CCDC93
KMT5B
E2F6
SRP14
SLC35E2A
BBS9
ERCC6L2
KLLN
MRPS31
ATL3
PPP1R9B
RGS3
IKBIP
APAF1
DECR2
CCNI
PSMD5
FKBP5
HILPDA
THBS1
ARNTL
CHSY1
KCTD12
RPS29
NOL7
LRR1
ZNF264
FOSL1
EFNA1
COMMD6
FAM228B
PFN4
AMMECR1L
EIF1AD
BANF1
MRPL30
MITD1
NUP85
FZD1
PTMA
IFT81
HGS
ARL16
VRK2
SLC4A8
GALNT6
PRDX1
C17orf75
GLCCI1
ZNF180
TBC1D30
MIA3
RPL26L1
BTBD10
PRKAR2A
PGBD2
TMEM65
UROS
BCCIP
RPS19
HSCB
CHEK2
DARS1
EEF1AKMT2
RPS11
RALGAPB
SMIM11B
SMIM11A
TESK2
OTULINL
RHBDD3
EWSR1
RBM48
PEX1
ERCC5
HMGB1
MSANTD4
CDK12
RABGAP1
CCNF
ARID2
FCHSD2
PPP1CB
TTC30A
STUB1
UFD1
CDC45
ARHGEF5
JAG1
CLDN4
CROT
PRR7
FAM200B
CD2BP2
TRMT2A
RANBP1
RRAS2
USPL1
FNDC3B
PLEKHJ1
ABRAXAS1
CDKN2C
IFIT5
TAF15
CDC42EP3
BIVM
ELL2
USP47
COPG1
SSBP1
RBM34
NMI
USP48
MINDY2
CDADC1
PPP5D1
CALM3
WASHC5
NSMCE2
NOTCH2
FGFBP3
EPOP
PRCP
DDIAS
MYL12A
C21orf91
AHCYL2
DNAJC27
S100A2
PLA2G7
PTDSS1
MTERF3
INTS12
GSTCD
RUBCNL
PLS1
RCL1
C8orf76
TARS1
RPL27A
SLC25A36
CEP152
MRPL40
HIRA
USP1
PHF5A
ACO2
LDHB
CCNL1
TTC32
GPR180
ARHGEF7
AMACR
HNRNPA2B1
CBX3
MYH9
UBR7
GON7
DYNC2I1
RBCK1
HNMT
LIN54
SKA3
MRPL57
TXNDC9
EIF5B
SLC39A10
WDPCP
MDH1
SCYL3
TTC14
SLC2A13
PHLPP1
VMP1
PTRH2
HYLS1
MTHFD2L
SFMBT1
FBXO47
RNF103-CHMP3
RMND5A
TBC1D31
PTPN13
PTPN4
CCS
CCDC87
ITGB3BP
EFCAB7
ARID1A
PGM2L1
NREP
WDFY2
TMEM71
PHF20L1
IQCC
IL1RN
PPM1D
BORCS6
PARK7
NUP107
SORT1
NOL11
ZNF143
SECISBP2
TIPIN
POLR2G
PPL
TRIM62
IFRD1
ROPN1
DNAAF3
UBE2I
CBWD5
CBWD3
SEPSECS
ZNF614
MAP3K11
ZC3H8
INO80C
QTRT2
CCDC191
WDR27
C6orf120
ZNF195
RNF130
EHHADH
PRR19
PAFAH1B3
UCHL3
FKBP9
MAFG
SERTAD3
RIPK4
FGFR2
GDF5
CEP250
PLEKHA8
STARD4
LCN2
NHLRC2
DCLRE1A
DNAJC3
PPIB
GNB2
EED
PDE4DIP
ZFAND3
UCHL5
RO60
RINT1
KMT2B
PCNP
ASPH
GORASP2
LSM8
PYROXD1
FAHD2A
KLHL7
ZDHHC24
ACTN3
SNX17
EIF2B4
GRAMD2B
YTHDF3
PRKCI
GGCT
DSCC1
NANP
MRPS30
LY75-CD302
LY75
SPHK2
RPL18
MRPL3
ZNF76
MED4
LOC107984974
EMSY
GSK3B
ASXL1
FAM83D
DIAPH3
ZBTB40
DPY19L3
SYT7
SELENOT
PDRG1
VANGL2
NFKB2
PAPSS2
STX18
KRT8
STARD7
SPACA9
AK8
RANBP9
DPY19L4
CCDC130
H4C12
CRYBG1
G2E3
MAL2
GALNT3
MAT2A
KANSL2
ZHX1-C8orf76
ZHX1
RAD21
NDFIP2
RTN3
TOE1
MUTYH
GPR137
BAD
MED30
KIAA0895
CD46
TPD52
TMEM18
MOCS2
CUEDC1
NUF2
ARL14EP
ZNF497
KMT2D
UBE2F
SECISBP2L
NFATC2
PTPDC1
PIK3R3
HEXIM2
SETDB2-PHF11
SETDB2
CAB39L
PPP4R3B
ZBTB11
RC3H2
COQ9
CIAPIN1
ACTR6
CCNJL
WDR11
RUVBL1
THADA
PMS1
ORMDL1
CARNMT1
TMEM9B
RASGRF2
PRKD3
CTNNB1
ZNF777
CPEB3
LIG4
ABHD13
MARCHF5
ZC3HAV1L
TTC39A
PPP1R13L
RBM28
TTC26
TRMT61B
SAP18
TENT5A
ITGB1
ELMOD2
EXOSC10
CEP126
DMBX1
ZNF780A
COL9A3
ANKRD13A
PRKDC
MCM4
ARHGAP27
SQSTM1
GADD45A
CBLB
ARHGEF35
PDF
PTBP3
RPN2
MROH8
MRPL45
GALK2
COPS2
VPS50
HEPACAM2
TP53I3
RNF19A
OTULIN
TCF12
B3GALNT2
ZCCHC9
GTF3C2
SNRPG
ACOT2
LSG1
COMMD2
SCAF11
ZNF576
IRGQ
FRG1
YPEL5
ZNF518A
REEP6
PCSK4
WRNIP1
NOP56
MRPS24
RNF139
CCNC
CALU
EDEM3
MRPS35
TUBG1
RETREG3
UBE2T
PPP1R8
ZNF280D
SNRPB2
CLCF1
FAM98A
RPS27A
CLHC1
MTREX
DHX29
SMARCA5
GTF2H2
NAGK
TRNAU1AP
TIMMDC1
POLE3
C9orf43
C6orf89
RPS27L
DISP1
WDR53
FBXO45
THAP5
DNAJB9
NUFIP2
GSDMD
C1orf115
EIF3A
TNFRSF11B
COLEC10
INTS6L
CDON
EIF2AK3
ZC3H6
ERCC1
C19orf48
HSPE1-MOB4
HSPE1
HSPD1
KDM3A
C9orf85
ABHD17B
TSPAN12
ZNF711
SATL1
TBC1D17
AKT1S1
PTCD2
MRPS27
GPR37
RRM1
SHROOM1
ARL2BP
BET1
DCBLD1
PTOV1
VIRMA
RMDN2
HES6
ZNF226
UBC
GTF3C3
NBN
MRPL42
HAGH
FAHD1
LRRC58
TRMO
UBR2
ITGB5
ICE2
MAP3K13
STXBP4
COX11
GPSM2
METTL9
POC5
OTUD7B
TMED2
ZNF451
KIF16B
TRAPPC2
OFD1
ITGB8
CFAP20
WDR36
GLCE
MVK
TUT1
MEF2A
ZNF770
WDR33
COG7
RTL10
GNB1L
BICDL2
ARSJ
CEP63
ANAPC13
RPS3A
EIF4A2
ZFC3H1
THAP2
CSTF3
CKAP2
DDX6
ZMYM5
TNRC18
SUPT5H
RPS6
KBTBD7
TIMM10
EID1
SMIM10L1
PRH1-TAS2R14
PRH1
ZZZ3
BBS7
SPAG5
IQCB1
EAF2
SMCHD1
PDXDC1
ADPGK
FAM98B
NUDCD3
MRPS33
GCLC
NUP133
PARPBP
NUP37
UACA
SLC52A2
FBXL6
HACD3
NMD3
TPH1
SOX6
ZNF165
JOSD2
NAT10
ZFAT
NUP153
B2M
PLEKHA1
C11orf58
VWA2
ROPN1B
DLST
PGBD4
EMC7
BZW2
ANKMY2
IREB2
FAM3C
DNAJC25-GNG10
DNAJC25
KRIT1
ANKIB1
SPAST
GSAP
FCHO2
DDX52
ARPC1B
NDUFV2
PLAC8
UQCRQ
GDF9
DMTF1
RAB30
TIAL1
CDK8
FOXJ3
COG6
PTPN2
NSD2
NFIB
ZPR1
SHPRH
TRPT1
NUDT22
SRI
HEXA
RRP15
LNPEP
MTIF3
XPO1
NCSTN
COPA
INKA2
TFB2M
CNST
GPAM
ZKSCAN2
NDUFB4
C18orf25
ZW10
CDK17
ADAMTS7
GOT1
ADNP
LYRM7
MRPS14
SPRED1
LIN7C
C1orf74
TTC37
ARSK
RHPN2
DPF2
SLC24A1
PRKAB2
CHD1L
THEM4
ACOT4
ANKRD36C
SRSF7
FUT4
ZNRF2
MRPL11
DDX20
CCNY
SMC5
FANCI
TRIP4
CENPE
HMGCR
ORC5
CCNG1
SKAP2
MMADHC
INTS13
FGFR1OP2
RUFY3
PACSIN3
TMEM87B
MDM1
ATF7-NPFF
ATF7
CHCHD3
NBPF1
CD58
POLDIP3
ARL15
ANKFY1
SLX1B
SLX1A
BOLA2B
BOLA2
SUPT7L
SLC4A1AP
RPL22L1
LRRC6
ESCO1
TIPARP
SLC3A2
RPIA
ECT2
GPR160
CCDC15
FBXO32
PGRMC2
LIG3
STK4
RAP2A
FERMT1
RPE
GFM2
NDUFAF6
ARHGEF19
TRMT1L
SWT1
ZDHHC13
NRBF2
PLSCR1
TMEM185A
NIBAN1
STAT3
PKM
NOP14
GRK4
METTL26
PPFIBP1
PAK1IP1
C6orf52
RBL2
SLC40A1
CENPN
ZNF644
PON2
NLE1
BLOC1S6
FBXW11
CTR9
WDR35
MTX2
DAB2
ANKHD1-EIF4EBP3
ANKHD1
CBWD6
COPS4
HSPH1
PBLD
HNRNPH3
PFKFB3
SDE2
BDH1
TRADD
FBXL8
FAM53A
RGS2
PON3
MALSU1
SQLE
ESRP1
PPP1R12A
HSD17B12
TSGA10
PLK2
PPIL1
NPAT
ATM
SDCBP
MCTP2
MAD2L1
STK35
PLEKHF2
GARS1
STYXL1
MDH2
NTAQ1
TSG101
BCL2L12
RAMAC
KIAA0513
IRF3
HTR1D
FRAT1
MRPS23
CLTC
CCT5
ATPSCKMT
KLF5
PIK3R1
AP3B1
DERL1
ZNFX1
PIGF
CRIPT
TMEM106B
ZCWPW2
AZI2
ZSCAN30
EIF3H
GATB
HPS5
GTF2H1
AKAP8
GPN3
FAM216A
ARHGEF12
HOOK1
GEMIN4
SLC4A11