ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867216 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◣ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

FAM102A
SMARCD2
MYH14
LAD1
WWOX
FAM227B
DTWD1
PPDPF
DGLUCY
CNP
PDE4DIP
KMT5B
KANK1
TRIM37
BACE1
MTF2
PAQR4
NCOA3
STX16
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PI16
DPY19L4
IFT46
RUBCNL
GPSM3
PSMD6
B3GALT2
EPYC
ZKSCAN1
CDYL
C2CD4D
DHX36
MBNL1
H3C6
SLC25A10
ZNF24
CDK2AP1
PAPSS1
SLC33A1
PPP2R2B
PPP6R1
MRPS18A
SLC35B2
HR
PLEKHG4
EIF2D
NFE2
PARD6B
HOXA3
MTMR7
SPATA13
DYNC1H1
RTKN
POLR3E
ZCCHC4
DCLRE1B
AP4B1
HDAC11
PRR7
HMGB1
USPL1
KANSL3
ATL1
PFDN4
SEC14L2
ZNF180
NOXO1
USP32
CTHRC1
MYADM
E2F6
GBA
TMEM258
FEN1
PRORP
PPP2R3C
SYT1
GAS7
GAL3ST4
PALB2
DCTN5
USP8
EHF
RIPOR3
MAPK1IP1L
CNPY2
EMSY
ADGRL1
PMP2
CNIH1
PRKAB2
CHD1L
GABPB1
ADAM22
COL9A1
SCAF8
N4BP3
PLA2G7
EIF1AD
BANF1
STARD13
CLTC
HEXIM2
HEATR5A
LRRC37A3
THEM4
OTUD6B
RTL9
DNAJC14
BRIP1
ZNHIT1
PLOD3
HIPK1
ARF6
TRIM50
TMEM170A
CYP19A1
RNFT1
EFNA4
MRPS23
SRGAP1
PDE8A
INO80C
ZNF787
GDE1
GRK5
DCSTAMP
DSTYK
EIF3E
AP4E1
HSPA2
YLPM1
NUP107
INTS12
GSTCD
RGR
ITPK1
ZNF609
ARHGAP19
TADA1
CAPS2
CCDC130
RTBDN
LRP12
STRADA
CCDC200
BTBD3
ZHX3
PPM1D
PDXDC1
S100A13
SOX6
S100A1
GAPDH
WDR74
SMC4
IFT80
BCAS4
ARHGAP18
ARID2
COX16
ATP6V0A2
POR
PEX3
ADAT2
SULF1
VAX1
SART1
SYT7
EFCAB2
CORO2B
MAFF
VMP1
PTRH2
MCM7
AP4M1
DAAM1
MIDEAS
PRSS54
SPTBN1
KMT2A
DNAAF3
CSDE1
TINAGL1
OPA1
SORT1
CYTH1
NWD1
SLC11A2
RPL27
KLHL32
RAB17
PRELID3A
PPME1
C2CD3
FGD4
PLPP2
ANKRD39
PIK3R1
MAP4K5
RPL26L1
CEP85L
MRPS31
APPBP2
NEDD4
PCDH9
MEF2C
AMOTL1
USP3
METTL9
SMIM5
MAN2A2
INPP4B
MKRN2
POC1B-GALNT4
POC1B
FGFR4
RSAD1
SF3B2
ZSCAN32
ZNF174
CRBN
VEPH1
GEMIN7
PKM
LAMA4
ERN1
PCDH1
GFM2
MYO5C
FAM104A
C17orf80
PTP4A1
TMEM41A
ADRM1
FUT10
RHCE
FZD1
B4GALT7
SRF
PRPF18
SLC39A13
DICER1
NPAS4
TNRC18
DECR1
COL9A2
CFDP1
SLC39A6
ELP2
PCMTD1
PLEC
GTPBP2
GFRA1
TRIM2
APOD
SQLE
NDUFAF6
RMND5B
KDSR
TMPRSS7
USP15
DRAP1
C11orf68
PACSIN2
BCAS3
AMZ2
SPDYE14
SPDYE10P
CASTOR2
KIF21A
TRIM74
ELAPOR2
DRG2
USP30
DTX3
STX18
MRPL21
IGHMBP2
CA8
PTGR2
SLC2A12
TRIB1
UCHL5
RO60
STRBP
CTNNB1
OSGIN2
RBBP5
H2BC12
H2AC12
NSFL1C
CHD6
CGRRF1
SERPINA3
RAPGEF4
KIF22
MRPL44
NOL11
MIA
KRT8
TACO1
VCPKMT
SLC44A1
GNB2
TES
WDR11
MRPL42
CNOT6
LEPROT
LEPR
ACOT4
TRIM33
PIK3C2B
CPPED1
FAM214A
LMCD1
NELFCD
CLUAP1
HAPLN1
PYGL
PLOD2
CSTF1
AURKA
RPL30
SLC25A25
NAIF1
PLEKHF2
ANK3
SPATA2
SDK1
BCAP29
ATP10B
MNX1
PHACTR3
PLAC8
MAT2A
DDX3X
CMTM5
CDK12
ITGB3BP
EFCAB7
ADNP
MBNL2
RP9
SAR1A
RBBP8NL
AURKAIP1
SRRT
CCDC88A
IQSEC3
ARL14EP
SRI
LEO1
TUBG1
RETREG3
ZNF697
LOC100421372
HSPA14
CDNF
CA2
RAB5B
PHAX
GMFB
HTRA2
CCDC12
EFNA1
CEP120
HACL1
BTD
ANKRD36C
SGTA
RIPK2
CDK5RAP3
TSC1
GFI1B
DMXL2
ARL6IP1
RHOT2
ESRP1
UBE3C
RGS9
VGLL4
UBE2I
LIMCH1
HSPH1
EXOC5
AP5M1
TBC1D31
FAM177A1
EEF1A1
RBM39
TBC1D5
SLC6A14
FUT8
THOC3
ETNK1
MRPL40
HIRA
PEMT
RCBTB2
ERGIC1
SUPT7L
SLC4A1AP
ZNF280D
SMG1
CRKL
GBP1
SASH1
GGCX
UBC
MAN1A2
TUBGCP3
TUT7
FAT1
CPLX2
TMEM150A
LARGE2
FAM86B1
SLC25A21
CBX1
STX6
PLPPR1
ITGA6
TMEM242
ARHGAP27
RINT1
PSMG3
DMTF1
IREB2
IPO4
ZNF48
PCBD2
TRIM9
VIRMA
BRWD1
PRRT1B
HUS1
ATAD2
TSEN54
CASKIN2
MOCOS
SLC25A40
DBF4
FAM160A2
CARM1
SCG3
NPTXR
RHPN1
MAN2C1
CCNC
PPP1R3D
FAM217B
LTBP1
SCRG1
EIF2AK3
NBN
CCT2
PROSER1
NHLRC3
CCDC57
SLC27A2
MED23
DDX41
TMEM60
PHTF2
TDP2
ACOT13
ISOC1
PWP2
LOC102724159
RNF103-CHMP3
RMND5A
CYP51A1
PGC
CDIN1
FUT1
GOLGA5
NOXA1
TMEM44
DDX42
CCDC47
UNKL
KLF10
KDF1
AMN1
SNAPC3
SEPTIN9
FYN
PA2G4
RAB30
FAM120B
ABCA5
TEX14
RAD51C
INTS10
TPD52L1
NEMF
DHRS7
SSBP1
ZC3H6
FKBP9
SRRM3
METTL26
U2SURP
RABGGTA
GRAMD2B
TAOK2
RHOJ
MYO5A
ARHGEF37
TPK1
ARHGEF19
CFAP410
CERS5
RPS7
TIMM23
WWP2
SP6
ZNF706
MEN1
TEFM
MAP3K3
APC
ATXN2L
PRKAB1
FAM136A
STK32C
LRRC27
SIKE1
TBXAS1
CYP21A2
TARS2
SLC25A32
DCAF13
POFUT1
PLAGL2
NHP2
DHRS13
RBM4B
RTF2
DPH7
LUC7L3
CELF2
PNPLA8
CD58
TMEM68
TGS1
RELT
PTK6
LCK
GABRP
ARHGEF38
SPRYD3
RPS29
ZNF277
DOCK4
MRPS14
LRR1
EIF4B
GSK3A
DCAF8
WDR24
VGF
TNIP2
MTAP
NDUFS7
NUFIP2
TJP3
E4F1
THAP12
GVQW3
UGDH
XPC
LSM3
SPPL2A
GALC
RBM23
CCNJ
ZNF56
KLHDC9
KBTBD7
GFPT1
TENT5C
JOSD2
MAPK6
RRM2B
ADCK5
GAS8
SMPD3
DBNDD1
STAU2
PRRC2B
LSG1
CAPRIN2
DPP3
NUP155
PCBP2
GMPS
SAPCD2
FAM228B
SF3B6
CLDN4
EIF4H
CSRNP2
RFC2
PKD1
POLA1
IFT88
FAM207A
PPP2R5E
SLC25A13
PLXNB3
CLPB
ARFGEF2
CBLL1
PUF60
RMDN1
GPT2
CALM1
OSBPL2
SLC24A1
ATP5MC2
BPTF
NUDCD1
BMS1
PAXBP1
SRC
PIGM
TMUB2
GNB5
LHX9
NUF2
TMEM222
SMG8
MALSU1
POLR1F
EEF2K
SLC37A4
YWHAZ
NUDT3
OR2A1
NIN
OAZ3
INTS4
CDKN2D
ANKRD46
SLAIN1
C7orf26
RWDD1
HNRNPR
PSMD8
EXD2
RTRAF
RNF44
RIOX1
PDCL
SRGAP3
LRIF1
ADPGK
GPR137
BAD
PDIA4
STAT3
BBS9
PPIP5K2
SAR1B
HNRNPA0
NCBP2AS2
NCBP2
BICD1
NFATC2
AVPI1
ATXN7
PELI1
PARP4
NREP
DGAT1
HEBP2
MYSM1
FA2H
STXBP3
OBP2B
TNPO1
MAFG
TIMM23B
PARG
CLTB
SPECC1
UBE2J1
MAF1
HECTD2
RBM28
CPSF1
TIPARP
WIZ
ZC3H15
EEPD1
ZNF524
FIZ1
PHTF1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
C19orf48
B3GLCT
ZNF286A
TM9SF1
POLR2J3
TSSC4
UBQLN4
LAMTOR2
MDM4
DNMT3A
LCE1D
ASB2
RANBP3L
ZNF521
DYNLRB2
NME1
TPD52L2
WWP1
ZER1
PRMT3
ITGB1BP1
CPSF3
GRAP2
SNAP29
PI4KA
LRATD2
TESK2
RPL37
DDX1
SCAF11
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FGFBP3
TBC1D13
CAND1
POP7
HECTD1
ZMPSTE24
EEF1AKNMT
LRRC59
CDC73
TRIM16L
TOP1
PRELP
NFASC
SLC35E2A
ARID1A
ANGEL1
DCXR
TIMM9
KIAA0586
GSAP
ELL
DEF8
ATP6V0C
TRIP4
VAMP4
ZC3H7A
DTD2
NAA80
HYAL3
VANGL1
SYCP2
ZNF606
FRA10AC1
TK1
AFMID
NOTCH2
PSMF1
RNF19A
ZNF148
FRG1
KIAA0232
MAP3K9
DCTPP1
LYSMD2
ASXL2
TMOD2
IQCH
AAGAB
MCIDAS
BANP
GHR
TSPAN10
NPLOC4
SLC66A3
LOX
U2AF2
GTF2H2
OARD1
NFYA
INTS5
SH2B1
ATXN7L2
TUFM
ARPP19
SYBU
BTBD1
TLE3
ATP5F1E
HGS
ARL16
CIPC
ZNF497
ARIH1
EIF4A2
GXYLT1
KNTC1
ACTR10
RPS12
METTL25
CCDC59
SNX17
EIF2B4
PTMA
PLEKHM3
PHLDA1
LCE2A
PHIP
C16orf71
ANKS3
SULF2
RFLNB
ZNF318
FOXA1
ZNF407
SPART
FOXP1
KIAA0319L
COBLL1
SERPINI1
PDCD10
STAG1
CYB561
MTMR11
ZFAND4
TOMM40
NDUFC2-KCTD14
NDUFC2
ZNF408
ARHGAP1
LTO1
PTPN1
PREX1
IMPA2
PLEKHG1
CCDC180
KMT2B
PPP1CB
IST1
RBM25
CMTR1
TRPM7
L2HGDH
DMAC2L
CCPG1
C15orf65
SAP30
ABCD4
SAMD8
DNAL1
ZNF440
BCKDK
RPS19
ZNF212
RPS20
HSPE1-MOB4
HSPE1
HSPD1
SMAD5
CACUL1
ZNF548
RAB1A
PRKDC
MCM4
BICD2
COG3
MTRES1
UBE2Q1
CAPN5
PCTP
RCOR1
CLEC16A
TP53BP2
MAIP1
TRIQK
USP35
KCTD21
CYP2R1
ATF7-NPFF
ATF7
PON2
ASB6
UBR2
RABGAP1L
PANK3
DEPDC1B
FIS1
CFAP69
IL13RA1
TM4SF1
DMRT2
SETD1A
GOLGA7
UPF3B
NUAK2
FMN1
KRR1
ANTKMT
DHODH
TPBGL
KLF13
ANO3
VPS4B
BTRC
CEP41
CAPN15
MYCL
LGALS14
ARHGEF5
ZSCAN2
MEF2A
ZNF614
GABPB2
AZIN1
TMC7
FAM13C
HES3
COMMD2
SUGCT
MPLKIP
TTC4
HNRNPH1
UBR7
GON7
NCBP3
FBXO34
LOC100289561
HMGN3
MBTPS1
CALB1
TBL1X
EED
SPATC1L
AP3B1
PIGBOS1
PIGB
LYRM7
LATS2
RPS16
EIF3G
MAML1
GTPBP10
GTF2H4
SND1
FBXL19
MAZ
DNAJC5
NUCKS1
SOS1
NMNAT1
LZIC
ZNF718
ZNF595
RALGAPA1
INSM2
OGA
GTF3C3
PLS1
LNPEP
C1GALT1C1
DDX5
RBM17
STK3
ZFHX2
PRKCI
NDST2
PPP5D1
CALM3
COPS4
BNIP1
DNAJC25-GNG10
DNAJC25
HERPUD2
ARL8B
ARMH3