ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11856140 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◣ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

SLC35E2B
SLC35E2A
PGBD4
EMC7
ATG16L2
ARHGAP39
PHRF1
BCL6
PRDX2
PRKCI
PDXDC1
PIK3R3
PTDSS1
MTERF3
ATG101
ZNF219
SETD5
EIF3B
CNOT6
PPIB
STK35
SNAP29
PI4KA
TAF15
CDIPT
TSPAN4
POLR2L
WRAP53
TP53
PMVK
CDC25C
FAM53C
TINAGL1
MTRNR2L8
POR
MTRNR2L2
C2CD4D
PPDPF
GPSM3
SNX16
CDYL
SMARCD2
PFDN4
NOXO1
POLG
WDR74
IQCH
AAGAB
RGPD2
RGPD1
MTF2
PARK7
ARRDC4
MYH14
SH3KBP1
OGA
KLK6
DLST
ANKRD13A
PCDH1
NOP56
STX16
LSR
GNB2
DOLPP1
EED
FRAT2
FAM227B
DTWD1
RNF13
MAF1
SLC35A5
RHBDD3
EWSR1
ATG3
CENPN
USP15
CCDC200
PLEKHG4
MYO9B
HAUS8
PRR19
PAFAH1B3
YY1AP1
DAP3
KHSRP
AKIRIN1
NDST2
MRPS24
UIMC1
PRKDC
MCM4
PDE8A
UNKL
MYL12B
FAM102A
CDCA7L
DNAAF3
MTRNR2L9
PTOV1
ZNF775
SLBP
DNMT1
ETNK1
UROS
BCCIP
NOTCH2NLC
FOS
NOTCH2NLB
NOTCH2NLA
SPTBN1
TIGD5
EEF1D
KMT5B
COMMD6
HMGCS1
PAQR4
WWOX
DGAT2
ZNHIT1
PLOD3
PPP6R1
KCNH8
LAMB3
PDE4DIP
PAXIP1
UCHL3
ATP6V0C
FLCN
PPP5D1
CALM3
WASL
MYL12A
EIF2D
XRRA1
SPCS2
RTKN
ACSS1
HMGB1
RPL35
DGLUCY
ARPC5L
USPL1
FAM72C
E2F6
KANSL3
CFDP1
RMND5B
SPATC1L
METTL25
CCDC59
RNF103-CHMP3
RMND5A
ZNF609
BZW2
ANKMY2
LIN54
NOL8
CENPP
UBE2C
FUS
NWD1
ZCCHC4
ITGA6
MTBP
MRPL13
CDON
USP3
TMEM160
STIP1
MRPS31
MAT2A
DBP
PNN
OXR1
H3C6
FANCI
UBE2B
CDKL3
C6orf226
PROSER3
FRAT1
ZFAND3
MBLAC1
DPY19L4
DPP9
PIP4K2B
SSBP1
FGFR4
KAT7
MRPS11
MRPL46
RASSF7
LMNTD2
DRAP1
C11orf68
PSMD14
C21orf91
RBM7
C11orf71
ZNF335
SELENOW
PSIP1
LUC7L2
CIC
HSPB6
FAM72A
SRI
RBM39
LAD1
ANKRD39
SHKBP1
TMEM260
FAM72B
SLC25A42
TP53BP2
HNRNPL
ZNF8
FAM83D
FRMD5
NDUFB1
CPSF2
TTLL7
CNP
HDAC2
SYVN1
LEPROT
LEPR
UFSP2
CYP2R1
THOC1
DISP3
KIAA0319L
WASHC5
NSMCE2
STK32C
LRRC27
SLC5A1
STX18
KANK1
ANKRD12
RPL22
MIA2
RRBP1
FAM72D
PRCP
SLX1B
SLX1A
BOLA2B
BOLA2
PRDM10
TARDBP
HHIPL1
CCDC85C
ATAD2
RNASEK
PRR3
GNL1
UBA1
TMPRSS3
MRPL21
IGHMBP2
TEPSIN
NDUFAF8
SS18
HBB
STXBP3
DNAJC14
ARNTL
ARHGAP19
LANCL2
CCNL2
TES
TOP2A
CAPS2
TBC1D17
PGP
AKT1S1
PELI1
ZNF180
UBE2A
CNOT3
GTF2IRD2
LRATD2
ZFAND4
UQCRC2
RPN2
MROH8
C2orf42
PLPP2
FMN1
DDIAS
PPP1R13L
NUP107
UQCRQ
GDF9
GBA
MBNL1
ATP8A1
SELENOH
PIF1
FOSL1
INTS12
GSTCD
HECTD2
ADAP1
ZNF572
PSMD6
NOCT
BOLA2-SMG1P6
TANGO2
ARVCF
ACAP2
MSANTD4
ZMYM5
FMC1-LUC7L2
FMC1
OGDH
SSNA1
ATF7-NPFF
ATF7
ANAPC2
NUF2
NCOA3
TRIP4
OSBPL2
CBX5
SLC33A1
RAB4B
CNOT1
POLR2J3
RUBCNL
TMEM45A
RASEF
ITGB3BP
EFCAB7
ARHGEF38
EFNA4
BAZ1B
RAB33B
EIF1AD
BANF1
ATP5MC1
TMEM168
ALKBH7
NFE2
PRRC2B
CENPE
RPL19
MRPS23
SEPTIN9
TCP11L2
BCAS3
MRPL40
HIRA
HDAC1
FAM228B
TRIM37
RRM2
GTF2IRD2B
TLE3
NUCB2
OPA1
PPM1D
LSG1
NFYC
ADPGK
ABTB2
SPRYD3
INAVA
SMC4
SLC35B2
IFT80
MADD
HNRNPUL1
DOHH
RABGEF1
MED23
GPR137
BAD
SORT1
ZMYM2
SLC24A1
SP2
GTF2H2
UTP18
MBTD1
CLTC
AP2A1
SOD2
SKA2
PRR11
H2AZ2
PELATON
MGRN1
EMSY
DCLRE1B
AP4B1
NR6A1
RNF6
SLC44A1
RBBP5
NCDN
SMC3
MRPL44
PEX3
DSTYK
ADAT2
HBP1
MYT1
MTCH1
CBWD5
EIF2AK3
TMEM242
WDR11
PTP4A2
ANP32A
TMEM258
PDK2
FEN1
KMT5C
RBM42
LRCH4
FBXO24
GIPC1
HNRNPA1
COMMD2
PRKACA
MRPL45
CBWD3
FZD1
UFD1
CDC45
ARAF
BACE1
PRR7
PRKAB2
CHD1L
ZNF519
ABCB8
POLR1G
RPS7
COA1
TFPT
PRPF31
UTP23
ATP5F1E
SF3A3
B4GALT7
SREK1IP1
CWC27
MIA3
LEMD2
H2BC12
H2AC12
ATP5PD
RAB28
ZKSCAN1
SNX17
EIF2B4
CCDC12
PDIA4
ZNF687
RPS29
VMP1
TMCC3
PTRH2
FBXO33
CNPY3
PTCD3
POLR1A
ZNF574
DIAPH1
NDUFS7
ZNF300
TRAF2
IFT46
FAM227A
CBY1
NOL11
PRORP
PPP2R3C
DICER1
VIRMA
LRRC37A3
ZNF24
ZNF862
RPL26L1
RWDD1
ISOC2
ANKHD1-EIF4EBP3
ANKHD1
RBM28
PARD6B
SLC11A2
TUBB4B
COQ8A
SUPT4H1
MYADM
MTMR14
CDK12
ECHDC2
CEP63
ANAPC13
SCAND1
NLK
H4C14
B3GALT2
SERTAD1
GTF2H2C_2
GTF2H2C
DENR
TRIM2
MIA
HEXIM2
PKNOX1
RBM48
PEX1
UBC
PRKAG2
KMT2A
GOT1
S100A13
EFR3A
HR
TSR3
GNPTG
CD164
PACSIN2
KIF1B
PCLAF
ARL6IP1
DHX36
CSNK2A1
CANX
KRT8
FRA10AC1
EIF3E
HDGFL2
SH3TC2
IFT52
TATDN1
NDUFB9
ABHD2
VBP1
COPS7B
ATL1
BICD2
ZSCAN22
SLC46A3
GGNBP2
PLAG1
NARF
CHCHD7
USP30
RPL27
CHCHD6
ARHGEF5
SASH1
AK2
TESK2
PTCD2
MRPS27
ECPAS
RPS19
RAB5B
RHPN1
METTL9
TBC1D31
ATP5F1B
NSFL1C
GTF3C3
PALB2
DCTN5
ARL14EP
TRIB1
CFAP20
CCT5
ATPSCKMT
GALK2
FBXO5
COPS2
PANK2
RBBP8NL
MOCS3
DPM1
CBWD6
CALR
WDR62
THAP8
SLX4IP
RUVBL2
GYS1
TMEM41A
RAB7A
PPP2R2B
TMEM209
NDUFS3
KBTBD4
YJU2
PPFIA3
DDX41
CDK2AP1
C19orf73
WDR36
LDHA
INO80C
SYT7
KCNAB2
SETDB2-PHF11
SETDB2
CAB39L
TTBK2
NME1
MAN2C1
KLF5
PPP4R3B
PMF1-BGLAP
PMF1
USP32
GFM2
SMARCAL1
TMEM222
KATNB1
AURKAIP1
ADI1
CDKN3
GABPB1
ADGRL1
CCDC130
ADNP
TOMM40
TMEM60
PHTF2
CLDN3
SUPT7L
SLC4A1AP
HIBADH
OPA3
PAK4
ASH1L
FAM110A
COPS5
RUVBL1
FDFT1
THEM4
POLR3B
MAPK1IP1L
CDK16
SLC25A10
POLR3E
STAT3
RPL37
KCTD7
HGS
ARL16
PAIP2B
TMEM218
SMG8
RNF139
NPAS4
EIF3F
RBM27
NBN
SOX6
TPBG
HEXA
H3C15
H3C14
CHD6
LRPPRC
SPTLC2
SF3B6
FAM133B
BRIP1
NPL
EFNB2
COBLL1
SLC25A25
NAIF1
ARID2
NF2
KANSL2
CCNC
ZNF277
WDR53
FBXO45
DOCK4
PI16
USP8
G3BP1
DDX1
SKA3
MRPL57
PGBD2
CSDE1
AP4E1
GTPBP10
ZNF165
MRPL42
CKAP5
ZDHHC5
HUS1
SUPT20H
FANCF
PLEKHF2
OSBP
ALG10B
RBBP6
TMEM65
HOMEZ
TK1
SPATA13
PKM
CRBN
AFMID
ZMPSTE24
ZBTB45
SRRT
GGCT
PSPH
CCT6A
ALDH4A1
TPST1
COPS4
ZNF212
GSTA4
FBXO31
MTMR7
NECTIN3
MTIF2
RTF2
ZC3H6
TMTC4
EFCAB2
DRG2
CFAP77
ETV4
SLC39A13
UBE2I
NOTCH2
TMEM170A
OBP2B
HEATR5A
FSIP1
LRRC61
ACTR3C
SRXN1
IVD
SLC35B4
SPHK2
RTTN
KANSL1
DOT1L
TADA3
PAPSS1
CNPY2
CHCHD3
ARPC4-TTLL3
ARPC4
RPL18
CLDN4
MPHOSPH8
H4C15
PPME1
MRPS18A
C2CD3
WDR45
CUL2
SEC13
BNIP1
PLS1
PLA2G7
MAOA
MEIS1
RNFT1
LAMP1
LIMCH1
ATP5IF1
KLF10
MCIDAS
FAM156A
PLOD2
MAPK14
CYP51A1
HNRNPC
ANLN
AFF1
PRMT1
CWC25
SSR3
SART1
PGAP2
C7orf57
RHOT2
MKRN2
EPYC
CENPA
SCAF8
RLN2
PLEKHG5
MTMR12
CCNI
NUDT16
ENPP4
CLIC5
CALU
PGC
MICU2
ATL3
UCHL5
STAT1
RO60
MAN1A2
KLF6
TARS2
ERCC6L2
EEF1AKNMT
DIAPH3
CDK5RAP2
RB1
JOSD2
DCUN1D4
PSMF1
ETV6
GOLGB1
ZSCAN25
RPS20
PPWD1
MZT1
CENPK
BORA
HYAL2
ARHGAP27
ALKBH3
ZSWIM4
TTC26
ARID1A
TNRC18
GCA
ZNF484
CLPB
VCPKMT
TRMT2A
RANBP1
ZSWIM1
SPNS1
HAGH
FAHD1
ZNF787
CAPRIN2
AAR2
KPNB1
MRPL16
CCDC174
PRR14
CTNNB1
CCNL1
SERPINI1
PDCD10
MLEC
PTMA
FKBP3
SHOC2
GSN
CYTH2
BBIP1
USP31
LRRC59
TMEM248
PIK3R1
MRPS18C
MALSU1
HELQ
FCHSD2
TRMT61B
SCAF11
MBD4
IFT122
SUGCT
PRDX1
MPLKIP
GTF2H4
RRP15
OARD1
NFYA
FRMD6
FKBP9
EFNA1
HNRNPR
GATAD2B
CDIN1
LNPEP
SYT1
RFX1
PLEKHM3
HACD2
AP3B1
VPS50
HEPACAM2
GARS1
TBL3
SC5D
PSMD3
POLR1F
MCM7
DMTF1
AP4M1
TYK2
CTHRC1
CROT
BBS9
MAST4
DCAF10
RAVER1
COX16
PPP1R3D
GPR108
FAM217B
BTBD3
ZSCAN2
SPSB3
NUBP2
ATP5MC2
POC5
KIF22
FYN
TBC1D30
RINT1
KLHL32
CPSF1
CDC73
SND1
PSMD5
GET3
C17orf75
MRPL30
MITD1
ZNF644
HSPH1
COL9A1
GTF3C5
CNIH1
SIRT4
NDUFC2-KCTD14
NDUFC2
CCDC146
UBN1
GLYR1
GORASP2
NOP14
GRK4
SQLE
PSMD8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NR1H3
ACP2
TOM1
RCL1
MYO5C
INTS1
ADRM1
SUPT5H
PLXNA3
N4BP3
TPD52L2
SEC31A
LYRM1
DCUN1D3
CEP120
TMEM39A
C8orf76
DECR1
SIRT2
NFKBIB
EXD2
KMT2B
HIPK1
DYNLL1
SDHAF1
PPIC
TRAPPC9
ESRP1
CEP164
HOXA3
FOXA2
ACTL6A
RPL13A
GAL3ST4
FBXO22
NAT10
RPL22L1
TEFM