ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SOX9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◣ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MAMDC2
DUX4
FRG2C
SLC35E2B
BCL9L
SLC35E2A
FRG2
TINAGL1
MTRNR2L8
POR
MTRNR2L2
MSH3
DHFR
C2CD4D
PPDPF
GPSM3
CCDC200
SNX16
CDYL
SMARCD2
SNAP29
PI4KA
PFDN4
NOXO1
GFER
PDXDC1
POLG
WDR74
TRIM48
PLEKHB1
IQCH
AAGAB
COL23A1
RGPD2
RGPD1
MTF2
PRKCI
TAF15
MUC3A
PARK7
ARRDC4
MYH14
SH3KBP1
PPIB
RNASEH2A
PRDX2
MTRNR2L1
LRRC75B
GGT1
CDC25C
OGA
FAM53C
CNOT6
KLK6
PTDSS1
MTERF3
DLST
GIT2
ANKRD13A
PCDH1
NOP56
EIF3B
PGBD4
EMC7
CENPP
STX16
LSR
LRATD2
GNB2
ATG101
DOLPP1
ZBTB32
PHRF1
EED
ARHGEF1
FRAT2
FAM227B
DTWD1
YY1AP1
RNF13
WDR97
MAF1
PIK3R3
ATG16L2
SLC35A5
RHBDD3
EWSR1
ATG3
ZNF775
CENPN
USP15
PLEKHG4
COX19
DNAJB1
MYO9B
HAUS8
FOS
PMF1-BGLAP
PMF1
LMF1
PRR19
PAFAH1B3
DAP3
FAM102A
KHSRP
AKIRIN1
RAB4B
MIA
NDST2
MRPS24
UIMC1
FRAT1
PRKDC
MCM4
PDE8A
UNKL
MYL12B
CDCA7L
DNAAF3
MTRNR2L9
PMVK
PTOV1
SLBP
DNMT1
ETNK1
UROS
BCCIP
NOTCH1
ZNF217
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQCE
SPTBN1
TIGD5
EEF1D
KMT5B
SELENOW
COMMD6
ETV2
COX6B1
BCL6
HMGCS1
CFDP1
PAQR4
WWOX
HBP1
DGAT2
MBLAC1
ZNHIT1
PLOD3
PPP6R1
KCNH8
LAMB3
VPS37B
ABHD11
PDE4DIP
PAXIP1
UCHL3
TMEM63A
ATP6V0C
FLCN
ZNF219
TMEM253
PPP5D1
CALM3
WASL
MYL12A
EIF2D
CIC
TSKU
XRRA1
SPCS2
RTKN
ACSS1
HMGB1
TNRC18
RPL35
DGLUCY
ARPC5L
USPL1
FAM72C
E2F6
KANSL3
FER1L5
TSPAN4
POLR2L
ABTB2
RMND5B
SPATC1L
METTL25
CCDC59
RNF103-CHMP3
RMND5A
ZNF609
NOCT
BZW2
ANKMY2
LIN54
WWP2
PRDM10
NOL8
UBE2C
IL17RB
CHDH
FUS
NWD1
ZCCHC4
STK35
ITGA6
CDIPT
MTBP
MRPL13
SETD5
CDON
USP3
FOSL1
TMEM160
MAGIX
STIP1
MRPS31
MAT2A
PDE6A
DBP
TRAPPC6B
PNN
OXR1
H3C6
FANCI
SLA2
UBE2B
CDKL3
C6orf226
PROSER3
HSPB6
ZFAND3
DPY19L4
DPP9
PIP4K2B
SSBP1
FGFR4
KAT7
MRPS11
MRPL46
RASSF7
LMNTD2
DRAP1
C11orf68
PSMD14
C21orf91
RBM7
C11orf71
PITPNM1
ZNF335
KRT15
PSIP1
CABP7
LUC7L2
FAM72A
SRI
RBM39
LAD1
ANKRD39
SHKBP1
TMEM260
CNFN
HMX3
FAM72B
TNS2
SLC25A42
TP53BP2
HNRNPL
ZNF8
IRF2BP2
FAM83D
FRMD5
NDUFB1
CPSF2
TTLL7
EPN1
CNP
HDAC2
HBB
SYVN1
LEPROT
LEPR
ARAF
UFSP2
C4orf47
CYP2R1
THOC1
BRICD5
DISP3
NCDN
KIAA0319L
WASHC5
NSMCE2
STK32C
LRRC27
SLC5A1
STX18
KANK1
TTC9B
CCNP
ANKRD12
RPL22
MIA2
ANP32B
RRBP1
FAM72D
PRCP
DDIAS
SLX1B
SLX1A
BOLA2B
BOLA2
PRDX1
ZNF3
TARDBP
HHIPL1
CCDC85C
ATAD2
RNASEK
RABGEF1
C17orf49
MICAL2
PRR3
GNL1
CLDN12
RAB33B
UBA1
TMPRSS3
MRPL21
IGHMBP2
TEPSIN
NDUFAF8
SS18
LANCL2
STXBP3
DNAJC14
ARNTL
ARHGAP19
CCNL2
PLA2G7
TES
TOP2A
C6orf62
SHROOM1
GLIPR1L1
CAPS2
TBC1D17
PGP
AKT1S1
PELI1
ZNF180
UBE2A
CNOT3
GTF2IRD2
ZFAND4
UQCRC2
OTUD7B
RPN2
MROH8
C2orf42
PLPP2
FMN1
PPP1R13L
POLR1G
NUP107
UQCRQ
GDF9
GBA
MBNL1
ATP8A1
SELENOH
PIF1
INTS12
GSTCD
HECTD2
ADAP1
WRAP53
TP53
MGRN1
ZNF572
PSMD6
CCDC9B
BOLA2-SMG1P6
TANGO2
ARVCF
SP2
ACAP2
MSANTD4
ZMYM5
FMC1-LUC7L2
FMC1
OGDH
ETV4
SSNA1
OTUB2
ATF7-NPFF
ATF7
ANAPC2
TMBIM4
NUF2
NCOA3
TRIP4
OSBPL2
CBX5
SLC33A1
CNOT1
POLR2J3
RUBCNL
PLCE1
NBEAL2
TMEM45A
RASEF
ITGB3BP
EFCAB7
PTPRA
ARHGEF38
EFNA4
TBRG4
OTOGL
BAZ1B
PTP4A2
EIF1AD
BANF1
ATP5MC1
TMEM168
PSPN
ALKBH7
MED23
DUSP6
SMIM35
VTCN1
RPS3
NFE2
PRRC2B
CENPE
RPL19
CCDC12
CACNB1
MRPS23
SEPTIN9
TCP11L2
BCAS3
MRPL40
HIRA
HDAC1
FAM228B
TRIM37
RRM2
GTF2IRD2B
TLE3
NUCB2
TMEM94
OPA1
USP17L20
PPM1D
LSG1
CALU
USP17L22
NFYC
ADPGK
SPRYD3
INAVA
SMC4
SLC35B2
IFT80
MADD
HNRNPUL1
DOHH
GPR137
BAD
SORT1
ZMYM2
SLC24A1
GTF2H2
UTP18
MBTD1
UXS1
CLTC
TSKS
AP2A1
SOD2
SKA2
PRR11
H2AZ2
PELATON
EMSY
DCLRE1B
AP4B1
NR6A1
RNF6
SLC44A1
RBBP5
SMC3
MRPL44
HACD3
FDFT1
SPAAR
PEX3
DSTYK
ADAT2
MYT1
MTCH1
CBWD5
EIF2AK3
TMEM242
WDR11
ANP32A
TMEM258
PDK2
FEN1
MAST4
KMT5C
TUBD1
RPS6KB1
RBM42
TUBB4B
KIAA0895
LRCH4
FBXO24
MTSS2
GIPC1
HNRNPA1
SIRT2
NFKBIB
ZKSCAN1
MACC1
COMMD2
PRKACA
MRPL45
CNNM2
CBWD3
FZD1
UFD1
CDC45
BACE1
UBC
PRR7
PRKAB2
CHD1L
ZNF519
ATG9B
ABCB8
RPS7
COA1
TFPT
PRPF31
UTP23
ATP5F1E
GET3
FBXO32
SF3A3
B4GALT7
SREK1IP1
SHF
LYRM1
DCUN1D3
CWC27
SPATA20
CD164
MIA3
LEMD2
H2BC12
H2AC12
FARSA
CALR
ARHGAP39
ATP5PD
RAB28
SNX17
EIF2B4
PDIA4
ZNF687
PXMP2
POLE
RPS29
VMP1
TMCC3
PTRH2
LMCD1
PTMA
FBXO33
CNPY3
NREP
PTCD3
POLR1A
USP17L11
ZNF574
DIAPH1
NDUFS7
ZNF300
TRAF2
IFT46
FAM227A
CBY1
NOL11
CTDP1
RDH12
PRORP
PPP2R3C
DICER1
ARID2
VIRMA
CSPP1
COPS5
SRSF7
MPP7
LRRC37A3
ZNF24
ZNF862
RPL26L1
RWDD1
ISOC2
USP17L18
ANKHD1-EIF4EBP3
ANKHD1
RBM28
PARD6B
SLC11A2
COQ8A
SUPT4H1
MYADM
IVD
ARHGAP27
STEAP2
TBC1D30
HLF
MTMR14
CDK12
ECHDC2
CEP63
ANAPC13
SCAND1
NLK
H4C14
B3GALT2
ZBTB3
SERTAD1
GTF2H2C_2
GTF2H2C
DENR
TRIM2
HEXIM2
PKNOX1
TRIM29
COL9A2
RBM48
PEX1
NUDT2
PRKAG2
KMT2A
FAM222B
EIF3E
GOT1
S100A13
EFR3A
ZBTB45
HR
TTYH3
TSR3
GNPTG
PACSIN2
KIF1B
PCLAF
ARL6IP1
DHX36
STYXL1
MDH2
CSNK2A1
CANX
UGP2
KRT8
FRA10AC1
HDGFL2
SH3TC2
IFT52
TATDN1
NDUFB9
ABHD2
VBP1
MAP4K5
COPS7B
ATL1
BICD2
ZSCAN22
SLC46A3
GGNBP2
PLAG1
NARF
CHCHD7
USP30
RPL27
CHCHD6
ARHGEF5
SASH1
AK2
PSMA7
WDR31
TESK2
PRICKLE2
HYAL2
PTCD2
MRPS27
ECPAS
RPS19
RAB5B
LAMP1
XPA
DDR1
RHPN1
METTL9
CLIP2
TBC1D31
ATP5F1B
NSFL1C
GTF3C3
PALB2
DCTN5
ARL14EP
TRIB1
CFAP20
CCT5
ATPSCKMT
GALK2
FBXO5
COPS2
PANK2
RUNX1
RBBP8NL
MOCS3
DPM1
CBWD6
WDR62
THAP8
SLX4IP
RUVBL2
MKKS
MAMSTR
GYS1
EPYC
TMEM41A
RAB7A
PPP2R2B
TMEM209
SSMEM1
NDUFS3
KBTBD4
YJU2
PPFIA3
LIN7B
DDX41
CDK2AP1
C19orf73
WDR36
LDHA
INO80C
NCMAP
HOXA3
SYT7
NCSTN
COPA
KCNAB2
SETDB2-PHF11
SETDB2
CAB39L
TTBK2
NME1
MAN2C1
KLF5
SPTBN4
PPP4R3B
USP32
GFM2
SMARCAL1
TMEM222
KATNB1
AURKAIP1
ADI1
CDKN3
WDR61
PRR25
GABPB1
ADGRL1
SPTLC2
CCDC130
ADNP
TOMM40
TMEM60
PHTF2
CLDN3
CYP2W1
SUPT7L
SLC4A1AP
HIBADH
ASPM
OPA3
PAK4
GATAD2A
ASH1L
FAM110A
RUVBL1
THEM4
POLR3B
MAPK1IP1L
C18orf21
PNKP
MAN1A2
EHF
DYNC2I1
CDK16
BMP7
SLC25A10
POLR3E
STAT3
RPL37
KCTD7
HGS
ARL16
TTC26
PAIP2B
NRARP
TMEM218
SMG8
RNF139
NPAS4
H3C15
H3C14
H2AC19
H2AC18
EIF3F
RBM27
NBN
SOX6
TPBG
HEXA
LGR6
CHD6
LRPPRC
LOC100129484
SF3B6
FAM133B
CYB5R2
BRIP1
NPL
EFNB2
OPRL1
LKAAEAR1
PCNX3
MAP3K11
COBLL1
CSKMT
C11orf98
TRAF4
SLC25A25
NAIF1
NF2
KANSL2
FAM78B
MYLPF
CCNC
ZNF277
WDR53
PERP
FBXO45
DOCK4
PI16
NIPAL4
MAMDC4
USP8
G3BP1
RPUSD3
DDX1
SKA3
MRPL57
PGBD2
CSDE1
ATP1B1
RAB11B
DCPS
AP4E1
SLC39A4
GTPBP10
CPSF1
ZNF165
MRPL42
CKAP5
ZDHHC5
HUS1
SUPT20H
FANCF
PLEKHF2
FMO1
FGD5
OSBP
ALG10B
RBBP6
TMEM65
OSGIN1
HOMEZ
TK1
SPATA13
PKM
CRBN
AFMID
ZMPSTE24
SRRT
GGCT
PSPH
COPS6
CCT6A
ALDH4A1
TPST1
COPS4
ZNF212
GSTA4
FBXO31
MTMR7
NECTIN3
MTIF2
RTF2
GSN
ZC3H6
TTF1
TMTC4
PDP1
EFCAB2
DRG2
CFAP77
SLC39A13
KIN
ATP5F1C
UBE2I
ERCC1
NOTCH2
TMEM170A
OBP2B
HEATR5A
FSIP1
AKR1E2
LRRC61
ACTR3C
TTC30B
LSM5
SRXN1
SLC35B4
SPHK2
RPL18
RTTN
KANSL1
DOT1L
TADA3
PAPSS1
KDM3A
CNPY2
CHCHD3
ARPC4-TTLL3
ARPC4
METTL15
KIF18A
FAM83E
CLDN4
ARID1A
MPHOSPH8
H4C15
PPME1
MRPS18A
C2CD3
WDR45
CUL2
SEC13
BNIP1
PLS1
TTC16
SPRING1
RNFT2
PTRH1
MAOA
MEIS1
RNFT1
UNG
LIMCH1
ATP5IF1
ALKBH2
KLF10
CHD2
PLOD2
MCIDAS
FAM156A
SLC26A8
MAPK14
CYP51A1
CADM1
HNRNPC
ANLN
AFF1
PRMT1
CWC25