ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX768290 | HT-29
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◣ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

POR
IQCH
AAGAB
PARK7
POLG
SNAP29
PI4KA
PPIB
TAF15
SLC35E2B
CNOT6
MRPS24
AKIRIN1
ARRDC4
PFDN4
TMEM160
NOP56
DOLPP1
UBE2C
PRDX2
PRR19
PAFAH1B3
PROSER3
HSPB6
PTOV1
MYO9B
HAUS8
DLST
SLC35E2A
WASL
OGA
PHRF1
HHIPL1
CCDC85C
UBA1
CDON
GNB2
ATP6V0C
STIP1
CIC
ZNF775
RPL35
ARPC5L
ATG101
ZNF8
PRKDC
MCM4
RASSF7
LMNTD2
PDXDC1
KHSRP
EED
MBLAC1
ZNF335
DBP
SELENOW
DNMT1
COMMD6
UCHL3
PRKCI
RAB4B
BZW2
ANKMY2
HNRNPL
TMEM45A
RNF13
MAF1
RHBDD3
EWSR1
CDCA7L
PAXIP1
PRR3
GNL1
WDR74
PNN
TANGO2
ARVCF
RMND5B
CNOT3
TEPSIN
NDUFAF8
USP15
ANKRD13A
UIMC1
LIN54
PIK3R3
ZMYM2
CCNL2
NDST2
TBC1D17
AKT1S1
SHKBP1
TARDBP
TOP2A
KAT7
DPP9
PTP4A2
ANP32A
DNAAF3
CNOT1
PPP5D1
CALM3
ARAF
EIF3B
CENPE
ANKRD12
ARNTL
PGP
PPP1R13L
POLR1G
DISP3
SPATC1L
FRAT2
SP2
AP2A1
MRPS11
MRPL46
ALKBH7
LEMD2
TIGD5
EEF1D
UROS
BCCIP
FANCI
HDAC1
UBE2A
CENPN
PTDSS1
MTERF3
KIAA0319L
NCDN
FUS
C6orf226
PPDPF
FRAT1
CDC25C
FAM53C
PRDM10
MYL12A
NUCB2
SERTAD1
HMGCS1
SYVN1
ZNF519
PRKAG2
PIP4K2B
FAM83D
FOS
TCP11L2
SKA2
PRR11
ANKRD39
ATP5PD
MYT1
RPL19
ATG16L2
RBM42
UFSP2
RNF103-CHMP3
RMND5A
TRAF2
OSBPL2
ATP8A1
YY1AP1
DAP3
SSNA1
ANAPC2
MADD
PSIP1
SOD2
NR6A1
ISOC2
KATNB1
LUC7L2
FMC1-LUC7L2
FMC1
UFD1
CDC45
INAVA
HNRNPUL1
UQCRC2
GIPC1
COPS5
HDGFL2
LRCH4
FBXO24
CDK16
NLK
PCLAF
DGAT2
SLC25A42
GTF2IRD2
GTF2IRD2B
LRPPRC
STX16
BCL6
KMT5C
PANK2
EFNB2
ZMYM5
SRI
MOCS3
DPM1
PMVK
DOHH
CSNK2A1
ATP5F1B
TSPAN4
POLR2L
PDK2
FOSL1
UBE2B
CDKL3
UQCRQ
GDF9
C2orf42
CKAP5
KIF1B
MSANTD4
HOMEZ
CBX5
HNRNPA1
ALDH4A1
TMTC4
VBP1
RPN2
MROH8
TTBK2
RRBP1
TUBB4B
MTCH1
OPA3
PRCP
DDIAS
PIF1
DOT1L
HDAC2
RPL22
WDR45
RNASEK
WASHC5
NSMCE2
AK2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DIAPH1
PRMT1
RAB7A
RLN2
PLEKHG5
KLF6
COQ8A
TMEM218
CDK5RAP2
FAM72C
FAM72A
ATP5MC1
IFT52
FANCF
FAM72B
ZNF574
CD164
MYL12B
PMF1-BGLAP
PMF1
RBM27
CDIPT
ZSWIM1
PTCD3
POLR1A
PRR14
USP31
CHCHD6
FBXO5
LSR
KCTD7
SELENOH
NOL8
CENPP
GATAD2B
OSBP
PKNOX1
SMC3
PRKACA
CENPA
HNRNPC
C7orf57
WDR62
THAP8
PLXNA3
LRRC61
ACTR3C
TTLL7
ZFAND3
PRRC2B
CANX
SIRT2
NFKBIB
SS18
RUVBL2
GYS1
SETD5
MYH14
MTMR12
ANKRD17
FLCN
ZNF219
C21orf91
SLC46A3
TPBG
ZSWIM4
FAAP24
CEP89
CWC25
DGCR8
OXR1
SPATA17
GPATCH2
METTL25
CCDC59
ZNF564
ANKZF1
RLN1
MAOA
UQCRH
LRRC41
NOCT
ABTB2
UNG
ZNF687
CCDC102A
SIGMAR1
OGDH
NDUFB1
CPSF2
MGRN1
H2AZ2
ACTN1
FAM72D
IVD
SRPK2
RITA1
DDX54
MIA2
DCUN1D4
ACAP2
PXMP4
SPRYD3
LENG1
DRAP1
C11orf68
JPT2
PTCD2
MRPS27
MRPL21
IGHMBP2
RAVER1
SLX4IP
RFX1
YJU2
ABCB8
PLAG1
CHCHD7
ZNF484
PRKCZ
UTP18
MBTD1
YIF1A
CCT5
ATPSCKMT
FBXO31
MAP1LC3B
MTRNR2L2
TADA3
ARPC4-TTLL3
ARPC4
TBL3
SPSB3
NUBP2
MIA3
METTL3
EIF3F
PPFIA3
C19orf73
SUPT4H1
AFF1
MRPS31
STRIP1
TYK2
PSPH
CCT6A
MTMR14
ENPP5
SMARCAL1
MPHOSPH8
PPWD1
CENPK
FASN
ZFAND4
NFYC
FAM110A
DNM2
CEP164
TBC1D10B
MYLPF
POLR2J3
ZDHHC5
SAP30L
P4HB
KLK6
SLBP
CNPY3
SREK1IP1
CWC27
ATP5IF1
SASH1
ZNF77
TSR3
GNPTG
SRXN1
SPAG7
MZT1
BORA
ZNF92
TINAGL1
TDRD7
STK35
MAT2A
NECTIN3
SIPA1L2
FAM20B
ARHGAP19
TMEM94
PAIP2B
F11R
GATAD2A
PAK4
RECQL
GOLT1B
VDR
CXorf56
TOMM40
EIF4A1
ANKHD1-EIF4EBP3
ANKHD1
KCNAB2
CXXC1
BAZ1B
TRAPPC9
HSP90B1
FLAD1
FCHSD2
SP1
SRM
LAMP1
FRMD6
DAZAP2
ZSWIM3
ACOT8
BCAS3
TFPT
PRPF31
DYNLL1
RRM2
GOT1
KLF5
RAB28
TOM1
HNRNPAB
G3BP1
NAGPA
TPRN
RNF6
PRKCSH
CCDC151
RBBP6
RAB40C
RAB40B
TRIP4
PABPN1
PPP6R3
CDT1
ING1
LANCL2
MED23
HIBADH
FBXO33
MAMSTR
ASH1L
TCERG1
TMEM260
ZBTB3
SF3A3
FAM227A
CBY1
KANSL1
LAPTM4A
HBP1
GTF2H2C_2
GTF2H2C
MORN4
SLC25A38
RHPN1
FSIP1
ACAT2
GOLPH3L
ZNF175
KAT6B
AKT2
PACSIN2
TOM1L2
DRC3
BCL2L1
CUL2
COMMD9
SMARCD2
ENSA
ZNF138
FAM156A
PPP2R5A
PSMA7
MTRNR2L8
MCM10
RALY
TNRC6B
GRIPAP1
USP3
UGP2
RCN2
DYRK1B
TMEM242
NARF
ZNF273
TMEM199
POLDIP2
PCYOX1L
EIF2AK3
BZW1
GTF2H2
TK1
AFMID
CDCA3
ZFAND2A
RNF5
AGPAT1
RBBP8NL
SDF4
B3GALT6
KMT2E
IER5L
EIF2D
SPTLC2
IMMP1L
ELP4
SLC45A4
DOK4
VPS26B
NCAPD3
PER2
LSG1
ERV3-1-ZNF117
ERV3-1
MEIS1
WRAP53
TP53
RFWD3
CALU
LOC101927572
ALKBH6
ZFYVE21
XRCC3
ISG20
MACO1
NOC4L
DDX51
HYAL2
RPL13A
SFXN5
HRAS
CFAP77
PPM1L
TRAPPC3
TTC16
PTRH1
MAP7D1
FRYL
H2BC12
H2AC12
GPR108
TMEM183A
WASF2
FBH1
ANKRD16
IGSF9B
CCDC61
TACC1
ABHD2
ERI3
MSH2
CALR
GGCT
HERC2
CHD9
H2AC19
H2AC18
KDM4B
TPST1
PPP2R1A
CTPS1
SLC25A25
NAIF1
ATP6AP1
RWDD1
TIMM50
RUVBL1
H3C15
H3C14
ACTL6A
SEPTIN11
MAPKAPK5
COPS7B
TBCB
POLR2I
ATF7-NPFF
ATF7
SPNS1
LYRM1
DCUN1D3
NEURL2
CTSA
CCDC174
LMTK2
RAB11B
CBX8
TRIB1
FAM126A
RGMB
TMEM256
RMI1
HNRNPK
PEX3
ADAT2
TSPAN31
HNRNPR
C1orf174
GET3
ASPM
RBM39
DNAJC30
BUD23
HMGB1
USPL1
CCNB2
TDRKH
PGC
MAPK9
MTF2
UBN1
GLYR1
LRRC45
CENPX
NPAS4
ATP5F1E
FDFT1
TM9SF4
C16orf72
SDF2L1
MPND
H2AJ
KPNB1
GLRX5
CYTH2
COMMD2
CHD6
SCAND1
INTS1
MRPS15
RAB3A
NOXO1
ZNF609
ZNF212
ENPP4
CLIC5
HACD2
AP3M2
ABHD16A
SSBP1
MRM3
GLOD4
SSR3
HINT2
STT3A
DROSHA
C5orf22
TMEM219
PGD
NOP53
SORT1
BBX
GLO1
PGAP2
PAN2
NDUFS3
KBTBD4
TMX2
MED19
DIAPH3
GTF2H3
EIF2B1
ZNF639
DDA1
WASHC2C
ADPGK
ATAD3B
RAB5B
PCOTH
MIPEP
PPP6R1
CRBN
PDIA6
GATA2
CEP131
B4GALT7
C7orf50
DNAJB5
RPS20
CENPF
ZNF695
WDR70
PRRG2
NOSIP
EVI5L
TRIAP1
WASHC2A
CREBRF
ZNF830
CCT6B
ZNHIT1
PLOD3
ZCCHC4
TMEM222
HSPA5
FAM204A
CHMP3
RECQL4
LRRC14
GTF3C3
TOR1A
STX18
RBBP5
PLEKHM3
ZSCAN22
PCNX3
ADD1
WHAMM
HEXA
MTERF4
KIAA1841
SIN3A
HYOU1
COA1
SLC39A13
CCDC77
COPZ1
STK11
MVP
RPTOR
MYH10
IMP4
CCDC115
ANAPC5
AKR1E2
ZNF680
TIMM17B
PQBP1
POMZP3
MVD
RNF166
CTU2
TRAFD1
SRPK1
NWD1
CPSF1
CREB3L2
VPS50
HEPACAM2
ERCC1
POLR1B
C8orf33
NUF2
ALG10B
TATDN3
NSL1
INPP5B
FAM228B
LRRC37A3
SF3B6
FAF1
TPCN1
IQCD
ERCC2
COTL1
PSMD4
CDKN3
SEC13
ZNF789
COG2
E2F6
PDE6D
OPA1
ZNF107
SIRT4
NFATC2IP
FAM156B
WDR31
PDP2
ALG10
CENPM
KANSL2
CEP63
ANAPC13
ALKBH3
RFX2
PTBP1
GPATCH3
FYN
ZNF341
BAG2
TTLL11
ABLIM1
WAPL
IDH3B
NR1H3
ACP2
GPSM3
KANSL3
IARS1
SLC26A2
SMC1A
RIBC1
FBXO38
DNAJC28
ID2
GINS2
DICER1
RHOT2
NLE1
FAR1
TMEM60
PHTF2
RTF2
CELSR3
LINC02210-CRHR1
COPS4
DHCR7
CNNM2
PPIP5K1
CLCN7
TMEM39A
STK40
DNAJC11
EEF1AKNMT
OSCP1
PDIA4
BNIP1
NDUFC2-KCTD14
NDUFC2
SLMAP
ARFGAP2
PPT2
PRRT1
HGS
ARL16
MAST4
TMED2
HINFP
MORF4L2
MED30
MXD4
SRRM3
SRPRA
DDX19B
MTRR
FASTKD3
AARS1
CGGBP1
ZNF654
RP2
KNSTRN
ZNF44
PSMD11
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PELATON
RRP15
ZNF143
RAD54L
ELMO2
POLR3B
RPS6KB2
FAM98C
LRRC29
PSMF1
AGFG2
PRPF40A
ARL6IP6
ZNF513
NUP107
GGNBP2
PALB2
DCTN5
GEMIN7
DPH2
PLS1
GOLGB1
ECH1
KLHL25
POLR1D
FAM43A
LNX2
AAR2
UBE2F
TAS1R1
NOL9
SLC2A8
DPY19L4
TSACC
TMEM161A
NELFB
CCT3
MRPS23
PCNA
DDOST
ZFAT
COMMD1
CCT4
RBM48
PEX1
EHBP1
NOL6
CAMTA1
FKBP3
POLR1H
ZNF277
DOCK4
FGF9
ATG14
CBWD5
CBWD3
PODNL1
DCAF15
UBALD2
MRPL40
HIRA
LRRC59
PDIK1L
NAT10
NEMP1
YWHAQ
SMG8
HSCB
CHEK2
HEXIM1
ZBTB20
ZDHHC2
ACSF3
SPRING1
RNFT2
MANSC1
SARS2
MRPS12
ITGA6
NSFL1C
POFUT1
PLAGL2
CDK5RAP1
TESK2
FRA10AC1
SKA3
MRPL57
COQ7
H3C3
CFAP43
XPO4
CAMLG
NDUFA10
KMT2C
AURKAIP1
STARD7
GUSB
CBLB
RCL1
WASF1
CDC40
DDX39A
TSN