ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681305 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◣ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

RAB4B
FAM160A1
GSK3B
ZNRF1
HELZ2
SUCLG2
PLEKHA1
LMNA
PTK2
LGMN
WDR74
DENND2D
RUNX3
ARIH2
BTRC
TTC21A
GORASP1
GNA13
RAB3GAP1
WNT1
HSBP1L1
NIBAN3
PDE2A
DDHD1
CYP1B1
HYLS1
SLC2A5
KIF13A
ALCAM
GRHL3
MC1R
SPATA4
VPS37C
RFC2
TMEM229B
CCL4
SELPLG
KLRD1
ASAP1
RPS3A
ARID5A
RIN1
APOBR
FRA10AC1
C1orf127
PLEKHG6
CTTN
MAD2L1BP
CCR1
FGF2
RUNX1
PIK3CA
RAD52
LSP1
SNAPC3
RBSN
LZTFL1
BANK1
PLEKHG1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC3A2
DDX3Y
NAA16
MTRF1
DOCK10
DGKD
DBNDD1
CCL3
PPFIBP2
LNPEP
RASA1
ESR1
RPRD1A
SNTB2
CLN5
SYPL1
RASSF2
PIGV
ARHGAP31
YARS1
ARHGEF3
NFKBIZ
FAM234A
ACSS1
SMG6
TIMM17A
SYTL3
WDR41
CUEDC1
CD28
CXCR3
EHF
ACAA2
GABARAPL1
LAT2
OR2T1
ELMO2
TACC1
IL6ST
ZBP1
FAM118A
CNIH1
PARP1
LAMP3
SLC39A13
BIRC3
TADA1
SERF2
ELL3
PSIP1
SEC14L1
RGS1
PSMC3IP
PTPN12
LOC283710
AFF3
DOHH
CEACAM3
TENT4B
ABCD2
RASGRF1
ICAM1
CD226
TSACC
CCT3
RARG
TMEM41B
SHQ1
GRIK4
TARS3
HES1
BHLHE40
TRIM2
COA6
UHRF2
SH2B3
NCF4
STRADA
ATP2C1
CREB1
OGG1
FCRL6
NDFIP2
DMXL2
ZNF705E
CCL22
NCOA3
MAP1LC3B2
SMARCC1
TSGA10
SPTY2D1
CCPG1
C15orf65
KANSL1L
NOTCH2
KRI1
UTRN
CKAP2
ZNF302
JAG1
ASNS
MGAT1
CYB561A3
MBD6
KCNJ1
ZFP69B
MAD1L1
ELF2
MZB1
CLUAP1
USP6NL
SORBS1
ARF6
ZYG11B
ZNF565
ZNF146
GCNT1
ZP3
AMZ1
TOM1
PIGX
CEP19
DEF8
GPR141
PARVB
SDCCAG8
CEP170
SMAGP
ZGPAT
ARFRP1
TMEM147
SLFN12L
NSUN6
ARL5B
TRIAP1
SRSF5
ODAPH
MS4A1
RARA
ARHGAP45
SLC25A37
C3orf86
CSK
HMGCL
BPHL
C9orf72
MAPK1
TNFRSF14
HECTD1
TPD52L2
LDLRAD4
ICE2
TBC1D22A
WDFY4
LEUTX
GSPT1
CD59
TNFSF14
CCDC114
CYS1
LTK
CYP51A1
KCTD6
YAF2
TRAF3IP3
SPTBN5
ZPBP2
EHD1
SLC35B3
GPR146
IL4I1
CLEC2D
LRRC34
TLNRD1
CFHR4
RNF125
RASAL2
PIKFYVE
RFFL
ATAD2B
SLC37A2
CBLL1
SIRT1
SPECC1
PIK3R2
FKBP5
PKIG
CFLAR
CD244
EHBP1L1
EPB41L2
LASP1
PCMT1
MYCBP2
RBM47
ENPP2
NTMT1
EIF4ENIF1
ZNF397
SPAG8
IL12A
SAMD10
TMEM37
PSD4
GALM
PRPF40B
TAGLN2
TSC22D2
SLC1A4
PCM1
SPATA6L
CD101
HLA-DMB
SYNJ1
FBXO10
RIN3
NINJ2
CD1A
ANKRD26
ARHGAP25
EVI5
TLR1
CD55
C17orf49
IL21R
ITGA4
SMPD1
TTLL12
ABLIM1
ZNF799
CHIC2
DUSP2
NPIPB2
TNFRSF17
TMEM123
RAD50
ZFP3
GCFC2
SLAMF8
GHRL
GNG12
FRMD4A
TRMT6
MCM8
CLECL1
HERPUD1
HNRNPA2B1
CBX3
NKG7
COX7A2
CLEC7A
SEC23B
RIC1
NANOS1
TNFRSF10C
CCR7
TFAP2A
KIAA1841
PICALM
METTL7A
TFAM
AKAP13
PTPN2
CDK13
ARSB
RBM43
SEPTIN9
H6PD
ANXA5
CPPED1
ZCCHC3
HOPX
ZNF500
TMBIM1
CCDC28B
TANC2
EXOSC4
CTDSPL2
LOC388282
FTH1
STING1
RGCC
IQGAP2
FLCN
APELA
THUMPD3
ATP6V1A
POLI
CCL4L2
TNFAIP8L2-SCNM1
TNFAIP8L2
BIRC2
SPAG1
ZBTB45
HNRNPUL1
CCDC117
OSBPL8
TYW3
CRYZ
LPAR5
IL16
CEP112
CTH
MSL2
VKORC1L1
COPS4
PIMREG
CEP192
TRAF4
CD38
PYCR3
GTF2E2
HSPA4L
ABI1
DDX42
CCDC47
PJA2
SLC4A4
ZNF341
SLFN13
ZBTB21
TMC6
GPR55
PARP15
SIKE1
UPK3BL2
PRND
TNNI2
CEP83
ADA2
ANKRD13C
TJP2
LILRB1
LACC1
CCDC122
SS18
GADD45B
BRIX1
SLC16A13
GTF2A2
BCL2L13
IGFLR1
TMBIM4
RHOT1
PLD3
ZNF821
SYAP1
XPO6
VWA7
TRIB1
PTPN22
GPR68
CLDN12
TP63
NAPA
FSD2
TYROBP
RNF139
PLGRKT
NFKBIA
PRKACG
SLCO4C1
UBE2L5
MDM2
NINJ1
PALD1
TSC22D1
LEPROTL1
TPR
ODR4
NADK
ZMYM4
CCDC130
ZC3H12C
CYFIP2
IVNS1ABP
SAC3D1
MYL12A
IKZF2
BOD1L1
CNTRL
HSH2D
KIAA1217
RGS14
CAPS2
SYNCRIP
CAMK2D
TSPAN14
SEMA4A
HECTD4
ZNF446
NET1
B3GALNT2
GZF1
POFUT2
DNAJC10
TBL1X
CCNI
KAT7
PTGER4
WASL
SLC26A11
RMND5B
RPL22L1
ZBED5
SHBG
BORCS5
SAT2
SCARB2
FAM47E
BID
ATF7IP
RBM6
BATF
TMEM39B
SLC14A2
RRAGC
SUSD3
CCDC88A
CLCC1
ZNF318
VTA1
NMBR
SMG1
IDO1
DSE
RRM2B
DENND5B
DIPK2A
NCR3
PPCDC
SSX2IP
FUS
SFSWAP
SQLE
AIM2
GAN
TTC39C
DSCAML1
LAPTM5
UPP1
TIPARP
MIA2
PPP1CC
CD48
MIOS
ITGB8
NEK3
FSCN1
MVB12A
BST2
P2RY8
CTDP1
FCRL4
CD79A
ZNF292
ERBIN
RNF19A
UPF2
SIGLEC10
ELOF1
AP2A2
ESYT2
SLC12A2
MPPE1
FYCO1
GPX4
NR3C1
ALOX5AP
SKIL
OTOA
TUBB2A
BNIP3
TMEM266
HMGA1
MNS1
SYT5
LOC645177
C12orf77
CTSZ
GABPB1
USP16
ZNF692
LY75-CD302
LY75
CBWD5
DSTYK
NOS1AP
INSC
PPP1R18
CNPY3
PCBP1
KSR1
ITGAX
SLC7A6OS
PRMT7
DCP1B
WASHC3
MRPS18C
HELQ
GXYLT1
QSER1
RAD51
SLC35D1
AHI1
C15orf62
ANKRD46
LAIR1
CLIP2
NKD1
MX2
ASB1
NBPF15
SCD
BBS2
GPN1
CCDC121
RLIM
EGR2
EBI3
C5orf51
RNF168
PDAP1
BUD31
TBCEL-TECTA
TBCEL
STK11IP
PPM1M
UPF3A
CHKA
BCL9L
DPY19L4
CABLES2
SFT2D3
LRRC43
MFSD2A
TC2N
DYNC2H1
PACC1
DEGS1
DTX4
PAAF1
COA4
ALDH9A1
CLDN24
CLDN22
CYB561
USP28
KIAA2013
CTRB1
MOSPD3
LPXN
ZFP91
ZNF584
POLE3
C9orf43
SIGLEC6
PREPL
TCTEX1D2
UBAC1
NUF2
PACSIN2
MGRN1
GEM
POLDIP3
PPP1R16B
NOTCH1
ZFP36L2
SSH2
NCALD
HUS1
ANP32E
MFSD3
PPA2
SETD5
RNASEH1
VEZF1
ARL6IP1
CCM2
TARS2
OXR1
MCUB
CA13
SPTLC3
PRDM1
MPC1
FAM135A
DENND6A
C16orf54
MALT1
ARHGAP29
SKI
LIMD2
EPSTI1
PPIA
HCK
PAK2
IL10RA
TIMP1
TOLLIP
ANXA2R
MRPS23
RWDD2A
PGM3
SUSD1
CD36
ICAM2
LATS1
MTMR4
TXLNB
TAX1BP1
F2RL3
RCBTB2
IFI27L1
DDX24
SRGN
NEK6
CBLB
CTSC
NEK8
SYNPO2L
GTPBP8
GOLGA7
NREP
NFE2L1
GPC5
NDUFA4
SAYSD1
HECTD2
DENND4A
RCOR1
STYK1
CCDC9
SEMA7A
DST
RPL36AL
MGAT2
RBM38
UGCG
GALNT5
NCKAP5L
CCL3L3
CCL3L1
MTAP
CTNNAL1
TRIP11
FKBP15
LMNB1
CCL5
SRD5A3
EXOC5
AP5M1
SH3TC1
TMEM65
ARHGAP15
STAT1
LGALS14
CHRNA1
DRAP1
C11orf68
NAA35
ZBTB25
ZBTB1
OTUD4
ANP32B
BZW1
DHTKD1
DLX2
GLCCI1
CRLF2
RGL2
RASGEF1B
MTMR12
CEBPZ
ACKR3
DUSP14
ELK1
CUTA
CEP63
ANAPC13
REL
RPL3
GPR171
NIBAN1
FCER2
FAM107B
RABEP1
ZZZ3
H4C12
CLNS1A
NBN
TREX1
USP22
N4BP3
MROH1
HEXB
C2orf42
ELK4
MAPKBP1
SS18L2
UBQLN1
SH3GL1
SMC3
RBPJ
C19orf47
RPF1
PXN
ATP2B1
RPP25L
UCHL5
RO60
WNT5B
SRGAP2C
SRGAP2B
TASL
ZNF561
SLC25A51
TRIM38
NOC2L
FOSL1
GRAP2
TNPO1
FAR2
PLXNC1
VPS29
RAD9B
CASP8
SURF6
YPEL1
ZBTB43
NFU1
PCNA
RPS27L
HCCS
COPB1
RPS6KA1
TDRD7
ZNF142
BCS1L
MYADM
CBWD3
CBWD6
SEC31A
CBX6
SCAMP1
CCDC112
SCIMP
UBE2E1
OTUD1
GKAP1
RCC1
SESN3
NCF1
MEMO1
CCDC97
TPD52
MYLIP
HIPK1
EMP1
PARS2
CARMIL1
RAP1GDS1
RTL3
POLD4
ZSCAN23
KCNK10
GMEB2
GAS7
MTIF2
SMAD4
NUP153
ELAC2
LRRC59
CES1
ACTR6
SNX30
AVPI1
ZNF443
ST3GAL4
FNTA
CCDC15
MUC22
RB1
GPAT4
KIFBP
C10orf71
SETX
PIP4P1
SPTLC2
BPI
PIAS2
KATNAL2
FAM102B
FANCA
RGS3
CAMK1D
SDK1
ZNF529
METTL15
KIF18A
TPM1
ATP5MC2
APOBEC4
PCIF1
ACVR2A
ZNF627
AQP3
AMPD3
SCAP
PRKRA
PJVK
USO1
C6orf62
AP1G1
DYM
RDX
SAV1
PPP1R21
CLDND2
OCIAD1
PIGK
TOP2B
TRIM34
FXYD2
SGTB
NLN
ASXL2
PBRM1
GNL3
SNX10
CCR5
TRPC1
IVL
CCDC50
TAF15
TICAM1
YY1
UTS2B
EHD4
REPS2
CDPF1
MCCC2
S100B
YY1AP1
DAP3
POR
PISD
SGK1
GPR37
EPN2
CCDC171
VASP
ANK3
NAPSA
CSTF2T
RNF141
PER1
C11orf80
ERLIN1
SLC48A1
UGGT2
MYOF
BCAS1
DAPP1
FAM8A1
EVL
FBXO4
RIPK1
PRKRIP1
KIAA1586
PDE4A
BRPF1
DCAF8
PRRC2B
CHCHD3
WDCP
MGAT5
SPG21
PABPC1
LRRK2
ZNF687
FBXO31
MAP1LC3B
B3GALT4
AK3
DNAJC5B
RNF19B
PARN
MICOS13
HSD11B1L
CLIC1
GCA
IFIH1
STX6
PPM1A
IL18RAP
ZNF763
CD164
MCC
LY9
ESCO1
ARHGAP24
ITGB1
COG2
RECQL4
LRRC14
ACTR1B
IFNG
GREM2
ATP9B
RCOR3
USF1
MAK
SURF4
PRKCI
PITPNB
IL17A
RBM33
SMAP1
ADO
ADAMTS13
TAB2
IDE
PA2G4
YWHAG
ANGPTL6
TUBB4B
KLF13
PTCH1
DCUN1D2
POU2AF1
UGT2B17
ABRAXAS1
LATS2
DGKG
TACSTD2
THBS4
MTX3