ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681307 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◣ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

RAB4B
PTK2
RUNX1
PLEKHA1
LSP1
ARID5A
GSK3B
LMNA
AMZ1
LDLRAD4
DDX3Y
HELZ2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DDHD1
SLC2A5
RUNX3
HYLS1
CCL3
MAP1LC3B2
TMEM229B
GRHL3
DENND2D
GNA13
RIN1
LNPEP
CD28
VPS37C
CTTN
DOCK10
NIBAN3
RAB3GAP1
ALCAM
ARIH2
CXCR3
SUCLG2
SELPLG
ZNRF1
FGF2
TTC21A
GORASP1
MAD1L1
SLC39A13
SNAPC3
SMG6
PIKFYVE
SH2B3
RFC2
PIK3CA
BTRC
AFF3
SERF2
ELL3
CCR1
APOBR
SPATA4
UTRN
F2RL3
CUEDC1
RFFL
WDR74
ATAD2B
ESR1
ABI1
YARS1
UHRF2
CD38
DMXL2
KANSL1L
CCL4
ZBP1
PIGV
PPCDC
LAMP3
LZTFL1
PARP1
RASGRF1
SPTY2D1
BIRC3
ABCD2
APELA
SLC1A4
MAD2L1BP
FRA10AC1
LGMN
PLEKHG6
PARVB
USP6NL
NDFIP2
CD55
MC1R
SNTB2
NOTCH2
LILRB1
NFKBIZ
CYP1B1
TMEM41B
PSMC3IP
NCF4
CD59
CSK
CYP51A1
BANK1
SDCCAG8
CEP170
NCOA3
WDFY4
SEC14L1
MGAT1
PTPN12
CCDC114
COA6
LOC283710
STRADA
CREB1
GALM
KCNN3
FAM234A
SYTL3
ACSS1
CFLAR
SLC3A2
DGKD
MAPK1
NPIPB2
TNFRSF17
CD79A
GPR68
ATP2C1
ARHGAP31
ZNF341
ICAM1
FCRL4
GPR171
LAT2
PSD4
IQGAP2
TSACC
CCT3
RPRD1A
EXOSC4
TLNRD1
HSH2D
MS4A1
TACC1
CKAP2
UPF2
MBD6
BHLHE40
ITGA4
ZPBP2
C9orf72
ARHGAP25
PLEKHG1
TENT4B
NAA16
MTRF1
AKAP13
SKIL
FUS
RGS1
PPFIBP2
RASA1
TADA1
DUSP2
CNIH1
TRAF3IP3
NADK
TLR1
CYFIP2
WDR41
IL6ST
ASB1
LY9
IKZF2
PSIP1
IL21R
P2RY8
RASSF2
SPAG8
IL16
PPP1R18
CTSZ
GPX4
TOP2B
SYPL1
WNT1
PTGER4
ZNF302
BCL9L
CBFB
RBSN
GSPT1
CCPG1
C15orf65
ZYG11B
MFSD3
AIM2
PCMT1
DBNDD1
CD48
ZFP3
CARMIL1
OGG1
TNFRSF14
NINJ2
TYW3
CRYZ
ASNS
CAPS2
RICTOR
IL4I1
NDUFA4
CDK13
CD101
EVL
ARF6
SRSF5
ARHGAP45
FBXO10
NSUN6
SMARCC1
ARL5B
SIRT1
CCDC28B
TMBIM1
ARSB
TNFRSF10C
RGS14
SLC12A2
PIGX
CEP19
NTRK2
WASL
SPECC1
C3orf86
CHIC2
RRM2B
HNRNPA2B1
CBX3
MIOS
KRI1
ZNF318
RGS3
USP3
ZNF799
SLC26A11
RAD52
SH3TC1
GTF2E2
HLA-DMB
RNF125
SMPD1
SLC4A4
TBC1D22A
CLCC1
H6PD
GADD45B
PTPN22
MDM2
CCR7
TRIAP1
CLDN12
CMPK2
KSR1
RBM43
HECTD1
BORCS5
DEF8
CYS1
DSE
HSPA4L
ANXA2R
TAGLN2
SAYSD1
CBLB
BNIP3
ZNF397
TPD52L2
RPS6KA1
PICALM
ARHGAP17
ATP6V1A
RPS3A
C17orf49
RPL22L1
NIBAN1
ZNF763
ENO3
PFN1
CLEC2D
OGFRL1
QSER1
SSX2IP
CNPY3
RCBTB2
CLECL1
ELL
ZNF292
N4BP3
HNRNPUL1
TRIM2
RLIM
TOM1
PJA2
FCER2
MZB1
TCTEX1D2
LPXN
TARS3
PPP1R16B
TNFSF15
UPF3A
HMGB1
EHD1
MBNL1
PCBP1
UPP1
TFAM
TMEM123
GRIK4
AQP3
NUP153
TARS2
ZFP36L1
FAM168B
ERBIN
ZNF705E
MX2
ZNF443
SCD
TNNI2
NEURL2
CTSA
RIPK1
LOC645177
C12orf77
UBALD2
ARL6IP1
IFI27L1
DDX24
DEGS1
ITGAL
FKBP5
POLDIP3
ZNF44
GZF1
GPR146
RB1
TLCD1
UBE2L5
KCTD6
MVB12A
BST2
ZCCHC3
BOD1L1
BCL2L13
TRIB1
SELENOH
TSC22D2
IDO1
BEND6
GCNT1
METTL7A
CYB561
BRIX1
MYL12A
DENND6A
SS18
IDE
MALT1
NEK8
KIF13A
TSGA10
CD1A
RAPH1
CCDC57
RAD50
TIPARP
SLFN13
BPHL
ABLIM1
ELF2
PA2G4
CIITA
CCDC88A
SYNJ1
H4C12
NFAM1
TIMM17A
GHRL
CCL5
PRPF40B
WASHC3
ZC3H12C
TFAP2A
ALOX5AP
CCL4L2
SPIB
ZGPAT
ARFRP1
NTMT1
SFT2D3
TNFAIP8L2-SCNM1
TNFAIP8L2
KAZALD1
GPR141
CLEC7A
TRMT6
MCM8
IFNG
PIMREG
ZNF700
GTF2A2
POLI
EXOSC9
SLFN12L
TTLL12
CCDC117
TRAF4
AHI1
DHTKD1
DALRD3
NDUFAF3
SLC25A37
SMG1
MYCBP2
RBM6
ANXA5
LTK
CTDP1
LIMD2
SHQ1
NDUFC2-KCTD14
NDUFC2
SH3BP2
MYADM
PIK3R2
MEMO1
NBPF15
PLGRKT
RHOT1
BIRC2
CTDSPL2
MGAT5
LASP1
SLC25A51
PLEK
CA13
SYAP1
CAMK1D
RMND5B
TSPAN14
LAGE3
CBLL1
LACC1
CCDC122
SASH1
RAD51
PDXK
ZFP69B
EPB41L2
SQLE
XPO6
CLIC1
RHOH
RGL2
TUBA4B
TUBA4A
ICE2
PCM1
CYB5R2
DENND4A
TBL1X
C16orf54
RNF19A
USP28
ASPHD2
FTH1
HMGA1
OR4C16
DIPK2A
ANK3
OXR1
ZNF267
FLCN
IL10RA
HNF4G
NBEAL2
KLF13
SPAG1
LAIR1
TMEM37
MIDEAS
TRIM34
PPM1A
CTSC
KCNAB2
TJP2
NFKBIA
DENND4B
SMAGP
NR3C1
CORO1A
RET
CCDC97
TMEM266
NCF1
TTC39C
GCLM
ARHGAP24
PKIG
ZBED5
MTMR4
PMVK
TPR
ODR4
NFE2L1
TAB2
AP2A2
MICAL1
RFESD
MOB3A
IZUMO4
DCLRE1B
AP4B1
TMEM39B
USF1
TOR3A
TNFRSF11B
COLEC10
CLUAP1
SCAMP1
GSE1
TPM1
PRDM1
YTHDF1
CRLS1
CLN5
PRND
PPA2
TASL
CASP8
C5orf34
ANP32E
YY1AP1
DAP3
AP1S2
YY1
DOHH
ITGAX
TMBIM4
MAK
SLC48A1
CYB561A3
NFKB2
FAM102B
ZNF687
ZNF878
LRRFIP2
ZMYM4
YAF2
EPSTI1
ADORA2A
TMEM147
SC5D
SLCO4C1
WFDC2
COPS4
NCKAP5L
ZZZ3
MCUB
SAXO1
RRAGA
NAGLU
NUTF2
CENPT
B3GALNT2
BATF
PCCA
RNF34
ARSG
ENPP2
DYM
TAF15
TICAM1
MUC13
MRPS18C
HELQ
LOC388282
ZBTB18
GGT1
ZBTB45
SEPTIN9
MTIF2
FMR1
CCL22
SCARB2
FAM47E
TP63
SLC35D1
ICAM2
DERL3
SYNE3
LRRK2
EFCAB10
POLE3
C9orf43
LRRC34
PTPRCAP
SLC39A8
HCCS
TRIP11
MTMR12
CD86
TMEM30A
RASA2
FSD2
COX7A2
ELK4
LPIN2
FNTA
RDX
IVNS1ABP
MAPKBP1
ESYT2
RCOR1
SRGN
PPIA
LATS1
BID
SMIM14
MIA2
SLC50A1
POLD4
CPNE5
NUF2
CTH
ARHGAP30
ZBTB21
IL18RAP
EXOC5
AP5M1
ACOT7
DDX42
CCDC47
HEXB
FLOT1
FMNL1
PPIL2
DDX60
EHD4
IQCE
FAM135A
COL19A1
RMND1
ARMT1
VKORC1L1
BZW1
CAVIN3
MRPS26
SECISBP2
EVI5
GKAP1
HECTD4
EGR2
AMPD3
ACKR3
SPAG9
IRF8
NCOA2
MYO1G
MPC1
TMEM44
KCNK10
SURF4
ZNF592
ACAA2
CYP20A1
TMX4
MTA3
PREPL
DYNC1H1
NEUROG2
SLC35B3
SKI
EIF4A1
CLDND2
DSCAML1
RAC2
SLC16A6
TRAF3
ADARB2
TTC30B
SEMA4A
TUBB4B
PLD3
TNFSF14
BBS2
CFAP298-TCP10L
CFAP298
BCL2A1
SAC3D1
CCL3L3
CCL3L1
RWDD2A
PGM3
COG2
OTUD1
UGCG
SCIMP
EP300
NUB1
PIAS2
KATNAL2
DST
KIAA2013
CAMSAP2
TACSTD2
FAR2
GPR132
GPN1
CCDC121
H2AZ2
ZFP36L2
HES1
NOTCH1
GEMIN7
TMEM62
ZNF296
ANKRD46
RPS16
ATF7IP
APOLD1
IRF2
ADA2
CCDC9
MCF2L
NINJ1
LY86
CTDSP1
DGKH
INTS4
LMNB1
S1PR1
RASSF7
LMNTD2
VEZF1
SMAP1
CAMK2D
CPPED1
IL12RB1
CFP
RBPJ
NOS1AP
REV3L
GEM
GABPB1
RBM47
COPB1
RRAGC
C20orf203
COQ2
ICA1L
HERPUD1
UBAC1
PRKACG
LRRC8D
ARMC5
RPAIN
NUP88
CXCR4
PRMT1
PTPN2
HUS1
USP16
ABL1
GPR19
GRAP2
MNS1
UBE2E1
PET117
KAT14
ARID3B
CD96
GCFC2
VWA7
FBXO4
RHBDL3
NCF2
SPNS1
VIM
RAB20
PIK3CB
NUCKS1
SETD5
ATP2B1
PDCD1
SMPD2
PPIL6
OSBPL8
OXCT2
ZNF500
BCOR
DGKI
GLIS2
NEDD9
ADI1
AP1G1
ETFRF1
CFAP94
MEF2C
ACSL1
DCLRE1C
ZBED4
FAM167A
RHBDD1
PHLDB2
USP18
EIF4ENIF1
NBN
ZNF670
TNFRSF10B
RARG
CCDC130
THOC1
PLCXD2
UBL5
COMMD10
GNA11
KIAA1217
SPTLC2
GLT8D2
HCFC2
FAM107B
FAM8A1
SPTBN5
TNPO1
MICOS10-NBL1
MICOS10
ZFP62
CDCA7
EHF
C5orf51
PDAP1
BUD31
BIN2
FNDC11
CDPF1
ADO
MTMR1
SMIM19
SLC20A2
SEC23B
ANKRD13C
ZKSCAN2
UGT2B17
DPY19L4
TMEM267
ANKRD13D
TXNRD1
ITGB1
DLX2
MKLN1
ARHGAP4
ARHGEF3
NANOS1
STK11IP
SIGLEC10
NCOA7
SUSD1
CLCF1
OSTF1
NMRK1
ARHGEF9
CEP63
ANAPC13
CDK19
AMD1
TRABD
UBE2R2
RHOG
TRIM22
RUBCNL
STYK1
MGRN1
USP32
UCHL5
RO60
CREM
NSMCE3
IL27
NMB
GAN
ZNF446
GCA
IFIH1
KRAS
TRPV3
ANKRD26
CBX6
GABARAPL1
SNX3
TAX1BP1
SYT5
H4C11
C15orf62
FDX1
ATM
MOSPD3
GPAT4
SEMA7A
STYXL1
TNRC6A
MDH2
IL2RB
MPP5
ABCA5
RNF141
DCT
ATP8A1
DLGAP1
SPN
SLFN5
SETX
BCL3
HPS5
GTF2H1
DCP1B
FSCN1
DAG1
TRAM2
RMDN1
TCN2
PES1
CEP83
ARL5A
C19orf47
TXNL4A
RBFA
OTUD4
M6PR
KLRG1
SSH2
MRPL53
TTYH3
IKZF3
CD244
TMOD1
DPH6
SORBS1
PABPC1
ARHGAP29
MTHFS
SPATA1
GNG5
ZP3
TPGS1
SS18L2
STT3B
PXT1
KCTD20
TGFB1
CDYL
SEC22C
TSC22D3
GDI1
RABGAP1L
SLC25A15
DIS3L
GREB1
ADIPOR2
DNAJC10
KDM3B
SPRY2
RASGEF1B
ACVR2A
GPR18
TBC1D1
PARN
GIGYF1
PHF19
RIC1
FGFR1
HERC6
EHBP1L1
SMC3
RCOR3
SNX15
ZNF627
CBX1
TPD52
EBI3
HP1BP3
FSD1L
SEPTIN7
MTG1
ZEB2
DLAT