ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188634 | SNU-484
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◣ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

ARL17A
FOXD4L1
KRTAP13-4
KRTAP19-3
SPAM1
HHLA2
SKAP2
RALA
ZBTB22
HES1
HLA-F
DBNDD2
SUN3
RUNX3
TMEM41A
NLGN1
NBPF9
MAS1L
MX2
UBA7
RASGEF1C
KLHL7
WFDC10B
MAP4
PMM1
MGAM2
OR8S1
LTBP2
WAPL
C1QTNF6
CFHR2
SPDYE4
OR52A5
OR2F1
CLRN1
ABCB8
ST6GAL1
RASGRP3
LIPA
EPB41L2
CCDC152
KIF6
ZNF705G
GTF2IRD2B
PILRB
ALDH3A2
MTRNR2L9
GAB2
FAM186B
SPATS1
CELF6
DRICH1
VIT
C16orf54
OR10J5
VSX1
CHI3L1
PAPLN
PLXNA4
ANK1
RAX2
IMPG1
AMY1C
AMY1B
AMY1A
RASSF8
ABR
MRNIP
C1QA
LY9
IL1R1
NIT2
SYNDIG1L
TSHZ2
LGALS12
ACKR2
SCIN
ZBTB20
MYBL2
HLA-DRA
TXNRD2
TCEA3
CUEDC1
TNFRSF13B
TSKU
PRRT3
ZFP91
HRG
BCL6
GPR83
INCA1
GRAMD1C
GM2A
RETREG1
MPO
LDLRAD4
TMEM9B
SLAMF8
ZNF669
ADAMTS13
SUN1
NRXN3
NFIB
MAP3K13
MINPP1
RP9
HEMK1
HOXA3
PMP22
TSPO2
CYP4F11
MINDY4
GPR85
ZPLD1
NMUR2
TG
MYL7
MYOF
AXDND1
NSG2
METTL16
DEFB103B
DEFB103A
TNFSF15
SLC25A44
RPL29
TUSC2
PRAMEF27
PRAMEF15
PPIAL4H
PPIAL4C
PPIAL4A
SYNE1
MORC1
PRAMEF11
ZNF554
AFDN
ZNF3
ZNF165
FIBP
STRIP1
SLC5A10
MYLK
LALBA
FIGNL2
CASP2
IER3
NDUFC2-KCTD14
NDUFC2
RPS29
RABGAP1L
TEP1
H2BC1
H2AC1
SLC37A4
CCR2
ABI3BP
SLC22A12
IQCF2
CDKAL1
CCN4
LIMS1
ZBTB40
PRICKLE3
MLN
SLC17A2
DEFB128
CETN3
BTNL8
RPL41
SERHL2
WDR49
NCF2
ZMYM1
MED21
TMIGD3
DDX4
ENTPD5
TMCO4
TMEM45A
VPS72
VOPP1
DOK2
GAS7
SUPT3H
GBP4
PPM1L
MXI1
RGPD6
KTN1
GRWD1
NOMO2
CTPS1
AJUBA
CTNS
S100A2
CACNA1E
PIK3R5
ZNF761
SERPINB12
CBS
TSHB
MEST
SOWAHA
ZMAT4
TP53AIP1
XIRP2
THNSL2
SULT1C2
PHACTR1
NEURL3
LRRC7
GRIA4
GOLGA7B
BTNL3
ZNF284
SNAPC1
WNT16
SLC30A10
CCL3L3
CCL3L1
REPS2
PEMT
TRERF1
PDE1B
POLD2
PABPN1L
CD200R1
ATP2B4
CNOT6
IL2RA
TRIM64
HOXA11
CDH10
HSP90AB1
TTLL9
CREB5
KRT33A
TIAF1
PRAMEF1
TRIM40
H4C4
RTL6
PCBD2
SLC29A1
DPP10
ARHGAP45
SRGN
PHC2
IL1RL1
FBXL20
TTLL5
OR3A1
AGT
SLC35G5
LAMB1
IQCF3
ATAT1
TRIM34
RUVBL1
EEFSEC
SSR3
CTSW
EPB41L3
TRIM47
CYB561
BMP5
PRSS38
ANXA13
TPST1
BPNT1
TMEM222
TMEM254
TMPRSS7
MOCS1
ATP1A4
PAK1IP1
C6orf52
MACO1
CCDC124
ARID5A
NOL3
TUT1
LRGUK
SCARA5
ALDH4A1
IFI6
ZNF311
SLC26A3
MS4A6E
ARMH2
MOB3A
MAPK7
ACYP1
RAI14
ASZ1
FLT4
DYNC2H1
CD48
TCF4
STX18
LGALS14
MX1
PTDSS2
MRPL14
ZKSCAN4
RIPOR2
ARL4A
SLC8A3
SDR39U1
HEBP2
SLC9A9
UMODL1
DHRS7
CYRIB
HLCS
CCDC69
RPL17
DYRK4
H3C1
CAMP
DCBLD2
KCNE1
ELOVL5
RTBDN
HROB
FAM171A2
OR14A2
FKBP4
GSTZ1
NKAPL
CTSD
EVA1A
SPEF2
TTBK1
EFR3B
CORO2B
PCDHGA12
CACNG8
GRB10
CYP3A4
SEPTIN4
LACRT
OR6V1
CCDC188
ERAP2
ZNF98
TRIM43B
SPOCK2
SLITRK4
PLA2G7
PID1
PCDHB15
NPAS2
KLHL14
IL17B
HGF
DPH2
CKMT2
CHL1
CAMK2A
C6orf118
BCL11A
ASPA
USP25
HYAL4
STRIT1
PPP4R3C
FAM187B
PPIL2
MKS1
CCDC181
MALL
RRAS
TULP2
OR5AP2
NTM
NLRP6
RPA2
LIN54
BCKDHB
PPOX
TP53
MORN1
ARCN1
PRR30
TMEM52B
SSX4B
SSX4
SPEM3
HIGD1C
DMRTC1
CLASP1
CCSER2
PSMA5
MAST4
LIPM
SLC8A1
NOVA1
CACNG1
C7orf66
ZMYM6
PSMD5
CCDC13
AHCTF1
MRPL49
FAU
EXOC6
DEFB107B
DEFB107A
IDI2
BROX
GATAD2B
TXNDC12
SEM1
GFAP
C1orf115
SYNE3
DNAAF2
PDE6G
NOS1
RESP18
IL9
RAD54L2
CLASP2
RWDD2B
PPARD
KIF1B
BANP
ULK2
MLH3
ENKUR
SLC15A2
TMEM213
FLNC
SMYD1
TEX45
KCNMB3
GUCA1B
C4orf19
C1orf100
DEF8
CREM
DDX50
ZHX3
DAZAP2
EPHB6
GNA12
ZNF765-ZNF761
ZNF765
C21orf58
SLC7A9
MBD3L1
GNMT
DPPA2
SS18L2
RPP40
LGALSL
SLU7
PGM2L1
CRHR2
CNTN6
ENGASE
NQO2
MEF2C
BCAS1
BCAR3
RNF24
SAFB
CD200
SNAP91
UTS2
SLC39A12
MYMX
KRT39
DPH3P1
CYP2B6
MIA3
KIAA0895
ARHGAP23
RTP4
H3Y2
CYP11A1
NR1I3
CLIC1
GPN3
FAM216A
SOX6
IL22RA2
IL36B
CRNN
TMEM211
GAS2L1
CXCL17
LYST
FGFBP3
HNRNPF
NELFCD
PIK3C3
ZNF705B
SGK2
PRAMEF2
MARCHF10
GALR3
BCL9L
CREB1
CD1A
SEPTIN9
TRAF4
SUGCT
MPLKIP
ARHGAP24
ARHGAP29
ENO3
ECT2
TBC1D5
ZHX1
PTPN7
TTC26
BCAP29
ARPC5
RNF14
FBXL3
SLC4A2
VEZT
FGD6
STARD3NL
ACBD4
SLC11A2
QTRT2
CCDC191
CASKIN2
SYNJ2
PLCD3
RPS6KA2
YAP1
SOCS5
PIFO
SLC25A22
MAPK9
KIAA0513
MXD4
KIF23
TMEM150A
SFT2D2
FLI1
MRGBP
CAST
WNT5A
GIMAP5
RNF20
NBPF19
PDE7B
MAP2K4
NBPF20
ALLC
EYA1
PKD1L1
ISLR
OR5F1
LCE6A
PGM5
NPIPA8
C20orf202
KRTAP9-1
AKR1E2
VEPH1
UGT1A8
TRMT9B
TMEM184A
TDRD5
SLCO1A2
SFTPD
S100G
RGS7BP
RDH5
PSG6
PRSS8
PEG3
PCDHGA8
PALM3
OSMR
OR52H1
OR51I2
OR4N2
OR10AD1
NWD2
MS4A10
MROH9
MCF2
LHX1
KIF4B
HNRNPCL1
GBP1
EN1
COL11A1
CLDN2
CFHR5
CDH19
C5orf46
BEST3
ANGPT2
SLC3A2
METTL15
KIF18A
ALOX5AP
CCND3
XAF1
IFT43
NUGGC
GSTM4
KLHL10
LAPTM4B
MTRR
FASTKD3
STOX1
PCP4L1
CLDN20
CEACAM20
BCO1
APOH
EIF3CL
EIF3C
C16orf95
DIS3L2
NFXL1
GALNT11
RAD9A
JAM2
SDHA
CCDC127
IL33
SLC34A1
REG1A
PLXNB2
MED12L
GPR182
C1orf158
TAGAP
SLC25A40
UFC1
PNPLA1
ARHGEF10L
TAC4
VSTM1
SCGB1D4
OR6C75
NXF2B
NXF2
NPHS1
C3orf85
BNIP1
CSRNP1
LIN52
ALDH6A1
NXPE1
MS4A12
IFNL1
MATN3
LRRTM1
DEFB1
CTNNA2
CPLX2
CCDC105
CABP5
PHF21A
RPP21
SEMA4F
FGD1
OR4X2
MACROD2
CYP3A7-CYP3A51P
CYP3A7
AMZ1
EVI5
NPIPB2
MTIF2
GPBP1
C10orf95
HMGCR
ID2
KDM4A
TENM2
NUP42
UBE2C
NT5M
CATIP
DDB2
TRPV5
LYPD4
CARNS1
ADAP1
FAM222B
RHEX
UBXN2A
CSRP1
MTREX
DHX29
RCAN3
CES3
OR1E2
CLDN10
FASLG
PTPN4
CHCHD2
ORAI2
NMI
DDI2
PPARGC1B
ST3GAL6
TRIM26
EDARADD
PGRMC2
PPARGC1A
PRR13
CCDC61
ATP13A2
OR2A14
TRIM39-RPP21
THSD4
MEI1
SPATA12
RFPL3
C16orf72
BTBD9
TMCC2
AP2M1
EIPR1
EIF6
PCNX2
B4GALT4
SLC19A1
PFKP
ZNF525
SLC2A2
RASA4B
HCRT
B3GALT5
TMEM260
HEATR1
MMP24OS
MMP24-AS1-EDEM2
EHHADH
NEK2
TMEM200A
FAM153B
IRF8
DARS2
CENPL
COMMD9
MIF4GD
LOXL1
SLC44A2
NODAL
KLF1
GCNA
GALNT15
CYB5B
MAPRE1
TSEN34
ANKS1A
PTPRF
BRINP3
TPD52L2
IFIT3
NPM1
SEC22A
CRTAP
TRAK1
UBE2T
CD80
CLCN1
OR5D13
EFEMP1
PGPEP1L
FBXL2
CYP17A1
CRISP3
RUNX1
IL16
SLC35D1
UPP1
ABCC11
COQ2
PTGES2
MANBAL
DALRD3
LMO7
CDH17
DNAJC5B
MEPCE
TMEM14C
WDR75
FOXP1
DGKZ
ST3GAL4
TMEM182
MAP3K7
MAPK8IP3
KLF7
SH2B2
USP47
SMC5
CLPTM1
PDE4D
TLR9
ZNF184
TMCO6
CMPK1
ZCWPW1
ZNF608
NFKBIL1
ATP6V1G2
GNGT2
LMO2
FH
INPP5F
TMED3
ZNF620
RRNAD1
ISG20L2
FDFT1
ULBP1
SCN2A
SAR1A
CEACAM19
TMEM70
RAPGEF2
PRAME
TMPRSS13
MAPRE3
KRT18
SRI
CCDC167
NPR3
SERPINB2
LGR6
ABLIM3
ACTL8
IL19
ZNF423
TRDN
PLSCR5
KRTAP5-11
CA4
RNASE10
AKAIN1
ACSM6
ZIC1
SGMS2
NTRK3
GJA8
VSIG10L2
TTLL2
TRIM50
SV2B
SUSD4
SPDYE1
SMIM10L2B
RIMS1
RHOXF2B
RHOXF2
RAP1A
RAET1G
PSG11
PHACTR3
PDE3A
PCP4
PARVA
OR52E2
OR2V2
NOVA2
NEUROD6
MYMK
MYH1
MUCL3
KRTAP4-8
KCNIP1
IL17C
FTCD
FAM209B
EPHB2
DLX6
CDHR4
CD3D
CCDC183
CASP1
CAPN3
CACNB2
AXL
APLNR
ANKDD1B
ALKAL2
ACVR1C
PLAAT2
UTP25
SUPT6H
SDF2
ATP13A3
TTC28
PHTF1
GPATCH3
AP3M2
TMEM114
SLC30A3
LRMDA
DNAJC5G
HSH2D
RARA
RFESD
NUP188
DOLK
SYNRG
GGA1
RGPD1
ZNF394
MARCHF8
NCK1
LPCAT3
RBBP8
MIB2
SEC31B
SERPINB6
TEX19
MMP27
MCCD1
SEC14L3
PVR
PLIN5
GUCA1C
GUCA1ANB
GUCA1A
ZBP1
SF3A1
CCDC157
GTF2H5
POLR2J
SHC1
RNF8
FAAP20
CELA2A
ESRRG
SLCO6A1
PRSS33
LRRC74A
FUT1
FAM178B
CMYA5
AQP8
TENT4B
STYXL1
ANXA11
C9orf16
ZBED8
PSMF1
IL1RAP
CCDC182
SEC62
FAM186A
PKLR
LMNTD1
SPAG9
SLX4IP
APTX
GLT8D2
LENG8
SLC39A11
MS4A7
FUCA2
TRIM27
C12orf71
CA6
MUC20
ZP1
TMEM150C
SPDYE17
SERINC2
RANBP17
PROS1
PLPPR1
MOSMO
PPCDC
CYTH2
CCL25
SRPRB
PUS3
DDX25
GMNN
NCKAP1L
DNAJC4
PRLR
OR52B6
SPDYE9
SPDYE8
SPDYE15
SPDYE11
NAT16
CDC14B
UPK3BL2
KLHL12