ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22955456 | HGC-27
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◣ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

DERL1
CDC14B
BCL9L
GSPT1
NEBL
RNF139
NWD1
PROSER3
HSPB6
PPFIBP2
ZNF839
PSIP1
ARHGEF17
ATAD2
COA6
KMT2A
GRHL3
LTBP1
BTRC
PGK1
STING1
SERTAD2
OMD
ZMYM4
TBCB
POLR2I
TATDN1
NDUFB9
LAMB2
CCN5
NFKB2
CYP1B1
LNPEP
COASY
TRIP11
SEMA3D
PRKCI
AVPI1
HELLS
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DSTYK
EXD2
GABPB1
TENM2
THUMPD3
MAD2L1BP
SLC16A4
COPS4
FLRT2
PTPN13
NEFL
FTL
VPS41
FAF2
PRPSAP1
PACSIN2
RPS8
CPN2
PIGK
TMEM65
HRCT1
NAGA
ZNF181
ECI1
DSE
EXOSC4
MORF4L2
TNRC6B
CCDC130
ATP2B4
IMPDH1
H2AX
CCDC114
COLEC12
THOC1
FAT1
PCDHA5
SFXN5
GTPBP3
ANO8
CCNI
HYLS1
USP30
CST3
MTX1
NUF2
BID
SLC7A8
MC1R
DHX8
ZNF529
LSM14B
USH1G
OTOP2
SP7
ENPP2
ZNF83
KBTBD6
TMEM179
RTEL1
SUGCT
MPLKIP
NKIRAS1
NR1D2
ZNF398
PIKFYVE
CCDC88A
PPM1A
SLC26A11
GTF2A2
ASPSCR1
TPR
ODR4
TMBIM4
CTDSPL2
MCC
WDR24
MRPS22
FIGNL1
ZZZ3
LRRC58
SPAG9
PPT1
ENOSF1
DACH1
MTBP
MRPL13
LOXL1
ARL6IP1
NRDE2
STON1
POLE3
C9orf43
TTLL12
TFAM
SLX4IP
TRABD
FAM8A1
TNPO2
NAT10
MMS22L
CAMSAP2
AP2A2
FLCN
TRAF4
ZNF561
CALM2
MYL12A
SEPTIN9
CCT8
CARMIL1
DCLRE1C
MOB3A
IZUMO4
KMT2B
MPC1
MICOS13
HSD11B1L
KDM3B
LRRC29
TTYH2
FLOT1
EHD1
SEC31A
ILF3
POMZP3
KCNN1
NAGLU
SLC26A7
RMND5B
RCOR1
DCLRE1B
AP4B1
TRIB1
MATK
H4C4
WWOX
MLC1
MAN2B2
TMEM97
NOTUM
FMN1
NSFL1C
PPP2R5A
RNF125
SCD
KDM3A
GCFC2
ZKSCAN2
ABCB6
CS
H4C14
NFX1
RDX
GSX2
SLC35D1
YAP1
SH3BP4
POFUT2
UTP23
PAPLN
WDR74
DYNC2H1
SKA2
PRR11
ESYT2
KANSL2
RAB30
NELFA
DOHH
NME7
BLZF1
DSCC1
H4C5
GLRA1
SMARCC2
WASHC5
NSMCE2
ABRAXAS1
GSE1
FBXO32
RUNX3
RAB4B
PTK2
PLEKHA1
GSK3B
HELZ2
LMNA
RUNX1
SUCLG2
RIN1
ZNRF1
RAB3GAP1
DENND2D
VPS37C
NIBAN3
TTC21A
GORASP1
ARIH2
CTTN
SLC2A5
ALCAM
SPATA4
TMEM229B
DDHD1
SNAPC3
FAM160A1
ARID5A
FRA10AC1
CD28
RFC2
FGF2
CCR1
GNA13
LSP1
PIK3CA
CCL3
APOBR
CYP51A1
KIF13A
LGMN
ZBP1
SELPLG
RASA1
AMZ1
AFF3
CUEDC1
PLEKHG6
WNT1
ESR1
DOCK10
DDX3Y
UTRN
SERF2
ELL3
CXCR3
YARS1
BANK1
DGKD
CKAP2
SNTB2
LZTFL1
CCL4
TADA1
PLEKHG1
NOTCH2
RPS3A
SMG6
RBSN
MAP1LC3B2
RFFL
SLC39A13
LDLRAD4
NDFIP2
RGS1
PARP1
NFKBIZ
MAD1L1
BIRC3
PSMC3IP
PDE2A
ATP2C1
UHRF2
SYTL3
PIGV
SH2B3
LAMP3
CNIH1
ASAP1
TSACC
CCT3
DBNDD1
ABCD2
NCOA3
TENT4B
ZNF302
SYPL1
FAM234A
SLC3A2
SEC14L1
PTPN12
RASGRF1
SPTY2D1
MGAT1
RAD52
DMXL2
SDCCAG8
RASSF2
CEP170
ACSS1
LAT2
RPRD1A
HSBP1L1
TACC1
KANSL1L
NAA16
MTRF1
NCF4
PARVB
C1orf127
TMEM41B
HES1
OGG1
TARS3
SLFN12L
ZNF705E
ATAD2B
ARHGAP31
NSUN6
ICAM1
SMARCC1
ZNF341
WDR41
CD38
ARL5B
CD55
SRSF5
CLN5
ABI1
GRIK4
STRADA
FAM118A
HECTD1
TIMM17A
CREB1
ASNS
TRIAP1
C3orf86
SIRT1
CLUAP1
BHLHE40
ICE2
ITGA4
SHQ1
TRAF3IP3
GCNT1
USP6NL
CD1A
TNFRSF14
JAG1
ELF2
GPR141
SLC4A4
CD59
DUSP2
ZNF397
ZPBP2
OR2T1
LOC283710
PIGX
CEP19
C9orf72
TSGA10
GALM
IL6ST
EHF
ZFP69B
TBC1D22A
MAPK1
ZYG11B
LILRB1
ZFP3
ABLIM1
CFLAR
SPECC1
ARHGEF3
RARG
KLRD1
ARHGAP45
ELMO2
EVI5
CD101
TOM1
KRI1
WDFY4
TYW3
CRYZ
CBLL1
APELA
FKBP5
NPIPB2
SPAG8
PRPF40B
CLEC2D
GPR171
GABARAPL1
CHIC2
CCPG1
C15orf65
CLDN12
TLNRD1
PJA2
TNFRSF17
CSK
GPR68
H6PD
CLEC7A
CYS1
SLC1A4
MS4A1
TPD52L2
IQGAP2
ARF6
PIK3R2
SORBS1
NINJ2
ZP3
POLI
ZNF500
TNFRSF10C
CCDC117
MYCBP2
F2RL3
DEF8
MZB1
LRRC34
ARHGAP25
TNFAIP8L2-SCNM1
TNFAIP8L2
TLR1
CYB561A3
BPHL
AIM2
SLFN13
AKAP13
CTSZ
TMBIM1
KCTD6
CD79A
ZBTB45
ACAA2
RGS14
PKIG
LASP1
IL4I1
KCNJ1
SS18
HSH2D
GHRL
PCM1
RBM6
HSPA4L
PTPN22
IL16
ZGPAT
PSD4
ARFRP1
NTMT1
SMPD1
SMAGP
CCL22
ARSB
HMGCL
UPF2
TCTEX1D2
RRM2B
EPB41L2
CA13
HLA-DMB
SLC25A37
RAD50
PPCDC
MBD6
RBM43
FBXO10
PLD3
TBL1X
PRND
OSBPL8
GZF1
GPX4
ZNF799
ZNF565
TSC22D2
NFE2L1
PICALM
METTL7A
TMEM147
SEC23B
NR3C1
TRMT6
MCM8
NADK
EIF4ENIF1
OXR1
BOD1L1
ZNF146
PPP1R16B
BRIX1
SC5D
CAPS2
C17orf49
UPF3A
VTA1
NMBR
NDUFA4
IDO1
DPY19L4
BCL2L13
CDK13
WASL
SSX2IP
HNRNPUL1
LY9
ACVR2A
SKIL
ZNF821
SYAP1
SLC35B3
FCRL6
ANXA5
FUS
GTF2E2
TMEM123
GPN1
CCDC121
CNPY3
NANOS1
MVB12A
BST2
CLCC1
DEGS1
ZBED5
TARS2
PCMT1
RAD51
MDM2
B3GALNT2
MX2
SIKE1
HECTD4
SFT2D3
SAMD10
SPATA6L
MFSD3
CCDC28B
P2RY8
LOC645177
C12orf77
BATF
BIRC2
CLECL1
NBPF15
MOSPD3
BNIP3
LACC1
CCDC122
TMEM37
NOS1AP
CEP83
ANXA2R
STK11IP
TPM1
PPA2
CBLB
SLCO4C1
C5orf34
ASB1
PIMREG
CNTRL
TIPARP
CCR7
IL21R
CAMK2D
YAF2
SAC3D1
SPAG1
GADD45B
LTK
OGFRL1
MRPS23
PRDM1
ZNF443
RPL22L1
TASL
WASHC3
LPXN
ANKRD13C
SMG1
ATP6V1A
SCARB2
FAM47E
TAGLN2
TRIM2
TP63
TFAP2A
SLC12A2
QSER1
CTH
CCL3L3
CCL3L1
SKI
HNRNPA2B1
CBX3
RLIM
RBM47
SPTBN5
ZCCHC3
IFI27L1
DDX24
NBEAL2
EIF1B
SYNJ1
HERPUD1
MCUB
CYB561
CTDP1
TJP2
MRPS18C
HELQ
HOPX
GRAP2
CD48
C16orf54
GPR146
CTSC
TMEM266
MGP
ZNF318
GAN
ADA2
NINJ1
ARHGAP30
TNNI2
UGCG
NET1
ITGAX
AP1G1
DIPK2A
PLGRKT
SSH2
COX7A2
COPB1
PTPN2
PREPL
IGFLR1
SRGN
STYK1
FTH1
CEP192
TMEM267
SLC37A2
FAM135A
TOP2B
CYFIP2
KAT7
NUP153
DCP1B
SNAP29
PI4KA
NIBAN1
POLDIP3
ZNF292
ARHGAP15
ZBTB21
DENND6A
NCF1
KSR1
MTIF2
UBE2L5
HUS1
CBWD5
LATS1
PALD1
FNTA
CHCHD3
PCBP1
UBALD2
DENND4A
AQP3
MTMR4
VWA7
SIGLEC10
TRIM40
WDCP
HMGA1
MTMR12
EVL
EGR2
FKBP15
MGAT5
CCDC50
KCNN3
RWDD2A
PGM3
PTGER4
RPS6KA1
ANKRD46
XPO6
UBAC1
ETFRF1
CFAP94
FCRL4
ZFP91
DYM
ERBIN
RB1
RMND1
ARMT1
METTL15
KIF18A
TMEM39A
ODAPH
EHBP1L1
EIF4A1
HEXB
CD244
IL10RA
POLR3B
SLC48A1
NBN
CCDC9
DHTKD1
C5orf51
H4C12
RARA
LOC388282
REXO2
CHKA
CD36
TNPO1
EXOSC9
SAXO1
RRAGA
KIAA1217
TSPAN14
ALOX5AP
MICAL1
TTC39C
ZBTB43
PLCXD2
USP22
DDX42
CCDC47
ADIPOR2
VPS29
RAD9B
ZKSCAN3
RGL2
ZNF692
MEMO1
CSTF2T
ACTR6
SHBG
ANKRD26
LEUTX
PPIL2
PIAS2
KATNAL2
CASP8
CCDC97
PRKACG
AMPD3
LAIR1
PRKRA
PJVK
NEURL2
MIA2
CTSA
CFHR4
CCM2
TIMP1
USP16
TNFSF14
SPTLC3
ZC3H12C
BORCS5
MAK
UCHL5
RO60
TMEM39B
GTPBP8
SAT2
RPA2
RASAL2
CHRNA1
TAB2
CCL4L2
TRIM34
LIMD2
DRAP1
C11orf68
NUP133
CCDC15
IDE
CYB5R2
RIC1
CCR5
AHI1
CLIC1
IFNG
ADARB2
RNF19A
NKG7
ELP3
CPPED1
N4BP3
MIOS
MRPL53
RNF141
GCLM
KIAA1841
TMC6
TDRD7
ACKR3
TMEM260
CTNNBL1
NCOA7
HMGB1
FSD2
CBWD3
MALT1
TXLNB
SLC25A51
FCER2
CBWD6
IL12RB1
ARHGAP17
SFSWAP
MGRN1
TTC30B
CLDND2
SLC39A8
MNS1
ANP32E
ZBTB20
ARHGEF9
MSL2
PPM1M
DTX4
RGS3
NUDT9
NAPA
SUCLG1
ZSCAN31
C2orf42
DST
LPAR5
INTS10
IKZF2
EPSTI1
RHOT1
CYP20A1
H2AZ2
TTC5
PYCR3
LRRC59
UBL5
PPIB
FRMD4A
ELOF1
IL18RAP
GPAT4
CBR4
SURF6
NDUFC2-KCTD14
NDUFC2
ICAM2
SMAD4
RICTOR
EPRS1
ZNF446
EXOC5
AP5M1
RCBTB2
PACC1
ZNF3
NCR3
ATP5MC2
NEK8
SEMA4A
ZNF763
ARL5A
GPR55
STAT1
TMX4
DLAT
TBL3
PPP1CC
NFKBIA
VKORC1L1
LRRC43
NUTF2
CENPT
OCIAD1
BBS2
BZW1
SRBD1
NAA35
INSC
ELK4
NOTCH1
SLC14A2
SCAMP1
LEPROTL1
TAF15
CHFR
TRIM38
PDAP1
BUD31
SMC3
RPAIN
NUP88
RFESD
FBXO4
INTS4
CFP
EIF2B5
DDX60
ANKRD13D
DSCAML1
KIFBP
MEF2C
TICAM2
CAP1
ZNF230
NUCB2
TC2N
TBCEL-TECTA
TBCEL
PCYT1A
SH3TC1
NFU1
UPP1
GALNT5
CEBPZ
ITGB8
CD86
PPIA
ZNF267
IL12A
ITGAL
ZNF584
SNX3
GEM
PEX12
DARS1
CEP63
ANAPC13
ASXL2
UGGT2
TPGS1
PARP15
RPL22
RHBDL3
CTNNAL1
NKD1
GTPBP10
GPR18
RBPJ
SLC50A1
TAX1BP1
CFAP298-TCP10L
CFAP298
SLC7A6OS
PRMT7
DNAJC10
ABCC11