ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188635 | SNU-484
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◣ SRX5188635: SNU-484

◢ RUNX3: STRING

RUNX3
NIT2
H3C1
NLGN1
TRIM40
GIMAP5
TRH
UBA7
VOPP1
ZBTB22
SPAM1
PDE7B
FOXD4
TMEM41A
CCL3L3
CCL3L1
HHLA2
OR2G6
CCDC152
EIPR1
DYDC2
DYDC1
C16orf54
SLC25A44
SKAP2
TXNRD2
KRTAP19-3
MAPK9
EVA1A
ACTL8
CYB561
KRTAP20-4
MRNIP
SERPINB6
VCX
ST3GAL6
FIBP
TTBK1
TMCO4
TSPAN12
PNKP
YAP1
LYZ
CFHR2
PMP22
MTRNR2L9
TMEM45A
OR10J5
SERPINB12
IQCF2
PRAMEF27
PRAMEF15
TEX19
TIFAB
CYRIB
PLXNA4
RNF8
DBNDD2
DEFB103B
DEFB103A
SLC5A10
BMP5
SUPT6H
SDF2
PKD1L1
OR2A14
MGAM2
MSL2
CREB5
MLN
DYNC2H1
SUN1
FER
ARL17A
PCBD2
C12orf71
SPDYE4
TSPO2
TRDN
PLSCR5
WT1
OR14J1
FETUB
MEIKIN
CYP27C1
SOX6
MKS1
IFT43
TWF2
IL36B
ISLR
OR1E2
CCDC146
TTLL9
ZNF184
MALL
HIGD1B
GTF2IRD2B
KAZN
HLA-F
MACO1
GPR83
OR5F1
KRTAP5-11
ENTPD5
RGPD6
RGPD1
NCOA6
AMY1C
AMY1B
AMY1A
CCR2
CRHR2
MME
MAPK7
USP25
SUN3
NXPE1
LNPEP
GMCL1
ZNF717
SYNDIG1L
ESRRG
GRAMD1C
PSMA5
UBXN2A
CD200
OSCP1
OR14A2
PABPN1L
CORO2B
SLC2A2
ARHGAP30
SPATS1
TRIM26
SP1
CENPV
SELENOP
BCKDHB
LXN
PCDHGA12
CA4
PDGFRB
H4C4
RFESD
ZC3HC1
MYO1D
GYPC
MAP3K7
CCDC174
SUPT3H
STARD3NL
OSBP2
HOXA3
HMBS
PAPLN
OR52A5
OR2F1
ANK1
TSHB
EPB41L3
MS4A12
RNASE10
AKAIN1
LOC101928841
TNS1
MTRNR2L4
HRH4
CST9L
ENDOG
LCE6A
XCR1
MEIOC
TSACC
CCT3
PDE1B
MTCH2
PILRB
MINDY4
NDUFC2-KCTD14
NDUFC2
GCHFR
MTARC2
NLE1
ZNF207
DEPDC1B
SAMD13
CACNG8
TRIM39-RPP21
TENM2
NPR3
TRIM64
SLC15A2
ARHGEF10L
EHD1
ZMYM6
AHCTF1
TTLL6
SOX4
ABI3BP
IL33
LDHC
IL1R1
OR3A1
TICAM2
CLASP1
PISD
HLA-DRA
CACNA1E
FASLG
CA6
CRB3
C10orf99
OR1A1
LMAN1L
GALNT11
PNPLA1
ACKR2
MMP27
TREH
MYO18B
EYA3
SEC31B
STRIT1
TMEM213
GCSAML
SRGN
HNRNPF
PRRT3
LOXL1
SCIN
DEFB107B
DEFB107A
AQP10
AGK
C10orf95
TRAFD1
RETREG1
GRB10
PRR30
THSD4
MUC20
APOL5
HES1
MX2
BCAS1
H4C3
IQCE
SLC29A3
PIK3CG
ZNF668
ZNF646
RHOBTB2
IL18R1
DICER1
POLD2
PPOX
CCDC69
ABCB8
YKT6
MTCL1
NRCAM
ZNF43
KRT18
SPDYA
ACOT6
DGKA
FAM186B
CNTN6
PGM5
NPIPA8
C20orf202
ACSM6
TBC1D21
EFCAB3
UGT1A10
SULF1
FAM166A
CYTL1
ID2
GPR85
SOWAHA
TRIM47
HTR3E
SUV39H2
CYP3A4
OR52B6
ZNF735
PTCH2
STIP1
CTNS
ZIC1
SUGCT
MPLKIP
MOCS1
NCKAP1L
JAM2
RAX2
SNAP91
SPRY4
SMYD1
GCNT4
TUBA1C
ACBD4
NOMO2
PLCD3
SYNE2
GAB2
LIPM
HSD17B13
RBM6
RPS29
TUT1
DOCK2
PUS3
DDX25
FAM186A
HSPG2
CT45A9
CT45A8
CT45A7
CT45A6
CT45A5
CT45A2
HTR3A
COA6
PRPF40B
ACSL1
MAST4
AGT
RARRES1
ITGA2B
ARL4A
MAP4K3
SMAD7
CCL16
GTF2H5
WDR49
NQO2
KRTAP9-1
IFNL1
NODAL
OR2J1
TNS4
CMBL
RDX
TMEM260
ZNF3
RUVBL1
EEFSEC
CAPSL
PDE4A
MAP4
USP47
RHEX
MAGIX
MAPK1IP1L
SCN2A
TMPRSS13
SRI
ZPLD1
NMUR2
ZMAT4
KRT33A
DPP10
SEPTIN4
SLC8A1
H3Y2
CRNN
NTRK3
OR6A2
OR2L8
UNC119
TM4SF19
NGB
MBD3L4
KCNK7
ECSCR
C3orf35
BPNT1
IFITM2
LOC100287896
LIPT2
TMEM150A
MORC1
TNFRSF25
SPATA22
RPS6KA1
DHRS7B
ATP1A4
CLRN1
SCAMP2
BNIPL
C3orf86
PLAAT2
BANP
KLHL7
CCN4
AKR1E2
FGD1
HTR1F
FER1L5
NECAP2
DLG2
CCDC90B
PSME1
CYP11A1
LINGO3
TBC1D5
PEMT
RALA
LGALS12
TOX2
S100Z
AVIL
LATS2
OTUD1
TNFRSF13B
GIMAP6
KLF11
DRICH1
FBXO39
GSDMC
HNRNPAB
KIF6
NT5M
KIAA1217
SASH1
HSPA13
BTNL8
LACRT
SLC25A45
MYLIP
LTA4H
CCND3
SCARB1
HSPBAP1
NBPF9
HYLS1
DEF8
MRPL21
IGHMBP2
ANXA11
PSMB5
ERCC6
ELP6
RAD9A
CLCN1
HNRNPCL4
HNRNPCL3
HNRNPCL2
C1orf127
MTIF2
TMEM14C
SLC37A4
DDI2
OR8S1
RUNX1
METTL15
KIF18A
TPST1
PPM1L
MAP3K13
HSPBP1
NCKIPSD
KCNE1
CCDC83
PPARGC1A
GNA12
MAP2K4
TG
TP53AIP1
ASZ1
OR6V1
CCDC188
OR5D13
GAL3ST4
DEUP1
TMEM89
SLC4A5
OR6T1
LRRN1
BRDT
ALOX5AP
FAM228B
PFN4
IFT140
CRAMP1
LIMS1
COQ2
SERHL2
PCDHGA7
SLC17A2
ZMYM1
RAI14
RNF183
REN
LIPA
CTNND2
TAC4
DCLRE1B
ST6GAL1
EMILIN1
CREM
ZBTB38
MRPL35
ERAP2
EFEMP1
PRKCQ
TMCC1
SRP68
C11orf98
TBC1D10C
TMEM17
GJA8
MCCD1
SUZ12
ST8SIA5
PARP15
SPDYE9
SPDYE8
SPDYE15
SPDYE11
ADI1
RAB4B
PTK2
PLEKHA1
GSK3B
HELZ2
LMNA
BTRC
SUCLG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
RIN1
ZNRF1
RAB3GAP1
DENND2D
VPS37C
NIBAN3
WDR74
TTC21A
GORASP1
ARIH2
CTTN
SLC2A5
ALCAM
SPATA4
TMEM229B
DDHD1
PPFIBP2
SNAPC3
FAM160A1
ARID5A
FRA10AC1
CD28
RFC2
CYP1B1
MC1R
FGF2
CCR1
GNA13
LSP1
PIK3CA
CCL3
APOBR
CYP51A1
MAD2L1BP
KIF13A
LGMN
ZBP1
SELPLG
RASA1
AMZ1
AFF3
CUEDC1
PLEKHG6
WNT1
ESR1
DOCK10
DDX3Y
UTRN
SERF2
ELL3
PSIP1
CXCR3
YARS1
GSPT1
BANK1
DGKD
CKAP2
SNTB2
LZTFL1
CCL4
PIKFYVE
TADA1
PLEKHG1
NOTCH2
RPS3A
SMG6
RBSN
MAP1LC3B2
RFFL
SLC39A13
LDLRAD4
NDFIP2
RGS1
PARP1
NFKBIZ
MAD1L1
BIRC3
PSMC3IP
PDE2A
ATP2C1
UHRF2
SYTL3
PIGV
SH2B3
LAMP3
CNIH1
ASAP1
DBNDD1
ABCD2
DERL1
NCOA3
TENT4B
DOHH
ZNF302
SYPL1
FAM234A
SLC3A2
SEC14L1
PTPN12
BCL9L
RASGRF1
SPTY2D1
MGAT1
ZMYM4
RAD52
DMXL2
SDCCAG8
RASSF2
CEP170
ACSS1
LAT2
RPRD1A
HSBP1L1
TACC1
KANSL1L
NAA16
MTRF1
NCF4
PARVB
TMEM41B
OGG1
TARS3
SLFN12L
ZNF705E
ATAD2B
ARHGAP31
NSUN6
ICAM1
SMARCC1
ZNF341
WDR41
CD38
ARL5B
CD55
SRSF5
CLN5
ABI1
GRIK4
CCDC114
STRADA
FAM118A
HECTD1
TIMM17A
RNF125
CREB1
ASNS
TRIAP1
SIRT1
CLUAP1
BHLHE40
ICE2
ITGA4
SHQ1
TRAF3IP3
GCNT1
USP6NL
CD1A
TNFRSF14
JAG1
GTF2A2
ELF2
GPR141
SLC4A4
CD59
DUSP2
ZNF397
ZPBP2
OR2T1
LOC283710
PIGX
CEP19
C9orf72
TSGA10
GALM
IL6ST
EHF
ZFP69B
TBC1D22A
MAPK1
ZYG11B
LILRB1
ZFP3
COPS4
ABLIM1
TTLL12
CFLAR
SLC26A11
SPECC1
TFAM
ARHGEF3
RARG
KLRD1
ARHGAP45
ELMO2
EVI5
CD101
TPR
ODR4
TOM1
KRI1
WDFY4
TYW3
CRYZ
CBLL1
APELA
ENPP2
FKBP5
NPIPB2
SPAG8
CLEC2D
GPR171
EXOSC4
RNF139
GABARAPL1
CHIC2
CCPG1
C15orf65
CLDN12
DSTYK
TLNRD1
PJA2
TNFRSF17
CSK
GPR68
H6PD
CLEC7A
TMBIM4
CYS1
SLC1A4
MS4A1
TPD52L2
IQGAP2
ARF6
RMND5B
PIK3R2
SORBS1
NINJ2
ZP3
STING1
CCDC130
POLI
ZNF500
TNFRSF10C
ZZZ3
CCDC117
MYCBP2
F2RL3
MZB1
FAM8A1
LRRC34
ARHGAP25
TNFAIP8L2-SCNM1
TNFAIP8L2
THUMPD3
TLR1
CYB561A3
BPHL
AIM2
SLFN13
AKAP13
CTSZ
TMBIM1
KCTD6
CD79A
ZBTB45
ACAA2
RGS14
PKIG
LASP1
IL4I1
DSE
KCNJ1
SS18
HSH2D
GHRL
MYL12A
PCM1
HSPA4L
PTPN22
IL16
ZGPAT
PSD4
ARFRP1
NTMT1
SMPD1
SMAGP
CCL22
ARSB
HMGCL
UPF2
TCTEX1D2
RRM2B
EPB41L2
CA13
HLA-DMB
FLCN
SLC25A37
RAD50
PPCDC
MBD6
RBM43
FBXO10
PLD3
TRIP11
TBL1X
PRND
OSBPL8
GZF1
GPX4
NUF2
ZNF799
ZNF565
GABPB1
AP2A2
TSC22D2
NFE2L1
PICALM
METTL7A
TMEM147
SEC23B
NR3C1
TRMT6
MCM8
SEPTIN9
NADK
EIF4ENIF1
OXR1
BOD1L1
ZNF146
PPP1R16B
BRIX1
SC5D
CAPS2
C17orf49
ARL6IP1
UPF3A
VTA1
NMBR
NDUFA4
IDO1
DPY19L4
GCFC2
BCL2L13
CCNI
CDK13
WASL
SSX2IP
HNRNPUL1
LY9
ACVR2A
SKIL
ZNF821
SYAP1
SLC35B3
FCRL6
ANXA5
FUS
GTF2E2
TMEM123
GPN1
CCDC121
CNPY3
NANOS1
MVB12A
BST2
KMT2A
CLCC1
DEGS1
ZBED5
TARS2
PCMT1
RAD51
MDM2
B3GALNT2
SIKE1
HECTD4
SFT2D3
CCDC88A
SAMD10
SPATA6L
MFSD3
CCDC28B
P2RY8
LOC645177
C12orf77
CARMIL1
BATF
BIRC2
CLECL1
NBPF15
MOSPD3
BNIP3
LACC1
CCDC122
TMEM37
NOS1AP
CEP83
ANXA2R
ESYT2
STK11IP
TPM1
PPA2
CBLB
SLCO4C1
C5orf34
ASB1
ZNF529
PIMREG
CNTRL
CTDSPL2
TIPARP
CCR7
IL21R
CAMK2D
YAF2
SAC3D1
SPAG1
GADD45B
LTK
OGFRL1
MRPS23
NAT10
PRDM1
SCD
ZNF443
RPL22L1
TASL
WASHC3
LPXN
ANKRD13C
SMG1
PROSER3
HSPB6
ATP6V1A
SCARB2
FAM47E
TAGLN2
TRIM2
TP63
TFAP2A
NSFL1C
SLC12A2
PRKCI
QSER1
CTH
SKI
HNRNPA2B1
CBX3
RLIM
RBM47
SPTBN5
ZCCHC3
IFI27L1
DDX24
NBEAL2
EIF1B
SYNJ1
HERPUD1
PIGK
MCUB
CTDP1
TJP2
MRPS18C
HELQ