ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190349 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◣ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

SPATA4
MGP
SLC4A4
EXD2
UTRN
WDR24
MRPS14
POLR3B
CD28
TTC5
BTRC
MYOM3
CD1A
METTL25
CCDC59
NUF2
EIF1B
USP30
ZBTB20
STAP1
VTA1
NMBR
CLUAP1
FAM8A1
CCDC130
GTF2A2
PIGK
TMEM115
TBL1X
IPO4
MED23
MRPL16
DYNC1I2
MRPS23
NUP133
PCDH1
SUGCT
MPLKIP
NUFIP1
GPALPP1
CHCHD3
CLDN12
THUMPD3
TARS3
COMMD1
PPFIBP2
KRR1
EVI5
PLCXD2
CD36
CUEDC1
SNAP29
PI4KA
PLEKHA1
TADA1
COA6
ZNF529
NCBP3
COPS4
HYLS1
C3orf86
ZKSCAN3
RGS1
THAP10
LRRC49
GPR141
LRRC29
MMS22L
NPAS4
HIF1AN
SIRT4
WDCP
PROSER3
HSPB6
CLEC7A
SPTLC3
TRIM40
MAD2L1BP
GSPT1
ACVR2A
ZMYM4
GPN1
CCDC121
VPS41
RGL4
DSTYK
OXR1
GHRL
DNAJC2
CSTF2T
TMBIM4
SC5D
SNAPC3
DHX8
DPM2
PLEKHG1
SLFN12L
NSUN6
ARL5B
COX16
EXPH5
CD55
DEF6
TASL
E2F4
PRKCI
HOPX
HELZ2
SNX12
SNTB2
ARHGAP15
GTF2B
CCR1
RANBP6
AFF3
ZNF500
PAFAH2
MOSPD3
TMEM267
GPR18
PDSS2
RIN1
GRAP2
HNRNPA1L2
NOS1AP
ZNF230
WWOX
PCOTH
MIPEP
ACTR6
NR3C1
COASY
TRIP11
H4C4
CA13
TSGA10
MRPS22
KBTBD6
BANK1
VPS72
PTK2
NCOA7
WAS
KIF13A
NET1
SLC26A11
TNFAIP8L2-SCNM1
TNFAIP8L2
TPM1
GTPBP10
ARL6IP1
MRPS18C
HELQ
PGAP1
RAD18
RFFL
FRA10AC1
LRRC59
CSDE1
ARL14EP
KLHL20
APOOL
CD101
SHQ1
CCDC50
KDM3A
RGS14
ZNF350
ILF3
ZNF397
TTC21B
VPS29
RAD9B
TTC21A
GORASP1
CANT1
METTL15
KIF18A
ERO1A
TTC33
DOHH
CHFR
NBPF15
ZNF302
PIGX
CEP19
LY9
ELP3
WDR47
CHCHD2
APOBR
TPR
ODR4
ZKSCAN4
AARS2
EIF2B5
CNTRL
TRIAP1
ENPP2
ZSCAN31
TFPT
PRPF31
CYP51A1
C5orf34
MEGF8
BRIX1
FAM126A
ATP5MC2
RPA3
SAXO1
RRAGA
AKAP9
CNTN1
ARIH2
PRPF40B
TSACC
CCT3
NAT10
PEX12
CAND1
NSFL1C
ABCC11
LONP2
COMMD2
CTTN
FKBP15
FAF2
CRNKL1
CFAP61
TFAM
H6PD
SIRT1
RNF139
REXO2
ZNF501
RPL11
TRIP4
RPS8
NOXA1
NBEAL2
INTS10
TMTC2
ZBTB45
LTA4H
PSMC3IP
SURF6
SIKE1
RAB3GAP1
COX6C
CHRNA1
ATP5F1B
LGALS2
CFAP20
HECTD1
SEC22B
FOXJ3
FBXO8
CEP44
SFXN5
USH1G
OTOP2
COPZ1
LRRC34
TBL3
CCDC30
SEMA4D
TMEM39A
STAU1
MICOS13
HSD11B1L
H4C3
NLE1
CCDC146
DPY19L4
SLC38A9
RBBP5
EIF2B2
UBQLN4
LAMTOR2
IFI16
LIN54
TTLL12
CCR5
TMEM229B
DDX27
ARHGAP30
ABHD2
PTPN22
SDAD1
CDADC1
STK11IP
COPS8
INTS12
GSTCD
CBLL1
POLR2C
ZNF705E
THOC1
APTX
ZNRF1
OGG1
CARD8
SPECC1
ATP2C1
PRDM1
C2orf42
RHEBL1
ZFPL1
CDCA5
MS4A15
LOC645177
C12orf77
DYNC2LI1
PIGL
CHPF2
RAB4B
GTF2F2
EXOSC9
CXorf56
TM2D1
TIMM17A
TARS2
IGFLR1
SPTY2D1
ASAP1
CBR4
GPR171
RRM2B
MZF1
C12orf43
MCC
AP2S1
DDX60
YIPF2
TIMM29
LILRB1
ECI1
FXR1
SPATA6L
NME7
BLZF1
UTP11
ZBP1
TSG101
CCM2
ITGB3BP
EFCAB7
MRPL21
IGHMBP2
PSIP1
ZNF148
HSBP1L1
HSPA5
CEP85L
TENT4B
UBL5
ZFP3
GTF2H3
EIF2B1
LATS1
CD38
DYNC2H1
MRRF
NLRX1
CHIC2
ZBTB43
ATG5
RAD54L2
RPL22
SNRPB
NFKBIZ
PLD3
DUS3L
ZC3HC1
STK19
DXO
CYB5R2
TBC1D19
PDE2A
FAM234A
MRPL53
SSH2
CCDC9
RPS3A
ZNF224
RPS7
FLCN
NELFA
EML2
GRHL3
BATF
AIM2
TNPO1
FLYWCH1
IDH3B
WNT1
ZNF106
SORBS1
CYP20A1
SPATC1
TIMP1
RBM25
WDR36
EXOSC4
KDM1A
GBP6
TBCB
POLR2I
EPRS1
FAM118A
ZNF225
SRSF5
FAM185A
NDUFA4
CCNI
RPAIN
NUP88
NFX1
BIRC3
SYAP1
SUCLG1
TDRD7
ZCCHC9
WDR70
LMNA
DYNLL1
AMZ1
STX18
KANSL3
ZP3
PRND
HILPDA
DMXL1
PPIL2
ESR1
INPP5B
ARL5A
VIPAS39
AHSA1
ELF1
OR2T1
TMX4
SMARCC1
PPP6R3
TMBIM1
ZNF561
MC1R
ATP6V0B
ZKSCAN2
PUM3
DPP9
CKAP5
CLPB
ZNF181
CXorf58
MTF2
NDUFAF5
ESF1
CLEC2D
RAD23A
NDUFB6
DHX36
ING4
SEC23B
PALD1
RGL2
SYNPO2L
MMUT
CENPQ
ERP29
TNFRSF14
RCC1
MS4A6A
PLEKHG6
DARS1
TCF4
MRPL3
MIS18A
HTR1A
ABLIM1
HECTD4
NDUFA2
IK
TIMMDC1
MGAT1
KANSL2
GSPT2
ABCB6
ZNHIT1
PLOD3
NIBAN3
COG7
RPP14
HTD2
HMGCL
CCDC97
PPIL3
NIF3L1
PRPSAP1
PTPN4
SPRYD4
ZNF3
NUDT7
CCT8
HTR5A
ADIPOR2
SKA2
PRR11
DNAJC19
SUPT4H1
EXD1
CHP1
GRIK4
PLEKHM3
PPA2
TMEM9B
SNRNP48
GSK3B
KAT7
CCDC114
C8orf37
SF3B5
NFE2L1
RTTN
SELENOI
ADGRF3
PREPL
CAMKMT
AP2B1
CLASP2
TMEM33
PPP1R16B
NCF1
C5orf51
DHTKD1
NDFIP2
SF3A3
CCNL1
AP1G1
LUC7L2
FMC1-LUC7L2
FMC1
GCFC2
PMCH
CWF19L2
FNTA
FHIT
FASTKD1
RFC2
STYK1
DRAP1
C11orf68
TES
RAD51
HDAC9
TM9SF1
RPA2
FAM76B
CEP57
CLEC16A
NAA35
TRMT10A
MTTP
ARMC1
RPL31
IDO1
EGR2
HMGN4
RARG
RMND1
ARMT1
GCNT1
B3GALNT2
CFP
GPR68
MTIF2
ETFRF1
CFAP94
DDX23
NUP214
NOTCH2NLC
NOTCH2
TRMT6
MCM8
ITGAX
SNRNP70
ZNF599
TICAM2
WDR77
ATP5PB
DCP1B
NFKB2
TOMM5
CDK14
TRAPPC2
OFD1
CMTM6
NUDCD1
ZSCAN12
RAB43
DEGS1
PIGBOS1
PIGB
RACGAP1
LOC391322
CIAO2B
CES2
TRIM46
KRTCAP2
SUCLG2
PIKFYVE
SHBG
SAT2
H4C5
NUCB2
YARS1
MTLN
RPL29
TP63
ARHGEF9
PRPF18
TSFM
DYM
CCDC117
DOCK10
CTNNAL1
NBR1
ZNF335
RTRAF
HSH2D
TJP2
ZNF596
AMBRA1
CCDC15
RHBDL3
RNASE6
PRKRA
PJVK
CAP1
CREBZF
UPF2
SLX4IP
INSC
TIMM22
PPARD
F2RL3
FKBPL
SEPTIN9
TMEM266
CD86
AARSD1
PARVB
GALNT3
NBPF11
TNPO2
SLC33A1
TMEM71
PHF20L1
CTNNBL1
FCRL5
ZNF785
HUS1
CETN3
BTLA
CHD1L
PRKAB2
ZNF443
CEP192
ZNF692
SLC14A2
MEF2C
PCYT1A
MFSD4B
GFM2
POFUT2
PMFBP1
DYNLRB2
TESPA1
RTEL1
NIP7
COG8
IL9R
TPST1
DCLRE1B
AP4B1
WNK1
ALCAM
OCIAD1
CST3
KAZN
ICE2
VWA7
CEP20
TECR
DNAJB1
CHCHD1
RMDN2
PKN2
TMEM260
SLC14A1
ELOF1
SETMAR
ZNF101
NUP54
H2BC4
H2AC6
TAB1
POLI
ATP2B4
CLN5
WIPF1
H2AZ2
NHEJ1
TYW3
CRYZ
RNF125
CNPY3
TNRC6B
GTPBP3
ANO8
ANKRD13D
ASNS
HARBI1
ATG13
PPM1M
IL18RAP
TAF15
RPL18A
STYXL1
MDH2
SGO2
SPRING1
RNFT2
USP22
NUP153
ASNSD1
ASDURF
NME1
KIFBP
RASGRF1
NANOS1
CTSC
CHKA
SLC41A3
AKR1B1
FRK
DGKD
LAMP3
PRDX1
ZNF669
CUTC
COX15
FAM204A
TNFRSF21
BDP1
LACC1
CCDC122
SLFN13
C16orf54
HEY1
FGF2
ENTPD6
MAP1LC3B2
STAT1
ZFAT
SMARCC2
PJA2
PON1
ESCO1
ATAD2B
AMPD3
RPL39L
SRSF10
ACKR3
ITGA4
CNOT4
KCNJ1
ZNF573
RAD52
PSMA3
STING1
H2BC10
ZNF628
ARID5A
COPB1
STAT3
SLC3A2
IL10RA
DCAF10
GZF1
MPV17
RNGTT
SMPD1
CYTH2
PSMD9
HPD
ZNF23
SPHK2
RPL18
MRPS31
LYRM4
FARS2
NUDT9
RBM48
PEX1
AGO3
CD69
RWDD2A
PGM3
RTF2
BRAP
ACAD10
POLDIP3
LIMS1
RUFY3
TACO1
ZPR1
DUS1L
CDK12
WDR74
RBSN
DCT
PIK3CA
GALM
UGGT2
SMG6
RBM43
TMEM237
WASHC2A
MYL12A
ZBTB5
NRDC
DNAJC15
STX16
UBAC1
LRRC43
SFT2D3
ACSL1
CEP295
SLC29A3
MRPS24
CCNT1
LY96
TMEM248
PIH1D2
NKAPD1
PEAK1
HMG20A
CORO6
TMEM97
NRDE2
SAC3D1
CCL3L3
CCL3L1
CASP8
TICAM1
NOTCH2NLB
NOTCH2NLA
H4C6
CDC37L1
EEF1AKMT1
FAM135A
ANAPC5
MRPL45
BRF2
TTC8
NDUFS5
HIP1R
NEIL3
INTS4
LAMTOR5
PNPO
CD59
TMEM131
TRAK2
STRADB
C1orf194
NINJ1
EID2
TBCK
AIMP1
CCL25
RASSF2
CFAP298-TCP10L
CFAP298
VPS8
MYO16
TRIM38
ERCC5
EVI2A
IMPA1
RPL10A
CCNA2
SMAD4
ABL1
BTF3L4
ZNF484
CARMIL1
H4C14
PSMC3
TRAF3IP3
TBC1D22A
EIF4ENIF1
MRPL1
EDC4
CFAP69
MBTPS2
ALG10B
SKI
DENND4A
NDUFC2-KCTD14
NDUFC2
NAGLU
ANKRD13C
SERF2
ELL3
TNFRSF10C
CTSZ
GLIPR1L2
CRTC2
ZNF875
GLRX5
H2BC11
H2AC11
DIPK2A
IRAG2
TMEM147
BOD1L1
PPM1A
GPANK1
CSNK2B
RFX7
ZC3H6
ZNF391
GABPB1
MX2
SRGN
SSBP1
SMG1
SELENOH
SNX15
UTP25
PLS1
TXLNB
NOC4L
DDX51
COPS7B
PDE6D
CAAP1
NAA16
MTRF1
RPS29
RTCA
NOL8
CENPP
USP7
ARHGAP45
POLR1B
DNAI3
SLC35A2
TACC1
RPL22L1
TIAL1
ZSCAN23
CCDC174
RLIM
CBWD5
CBWD3
CBWD6
RNFT1
TSR3
GNPTG
RPL36A-HNRNPH2
RPL36A
RETSAT
ELMOD3
CDK5RAP1
BTK
ZFP69B
CEBPZ
ATG4C
RPL5
RIOK1
CAGE1
USP15
WNT5B
SLC25A26
RANBP2
IL4I1
IGF1
WDR5B
TMEM256
ARHGAP17
HENMT1
P2RY10
SLC39A8
AMZ2
DMAP1
RPTOR
CNDP2