ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RUNX3 | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◣ RUNX3: STRING

GATA3
NTRK2
ICAM3
EOMES
EGR1
SP7
VEGFA
PRF1
ARID5B
IL1RL1
RUNX1
JAG1
SPP1
MMP9
THBS1
AHR
MMP2
AKT1
RUNX3
RAB4B
PTK2
PLEKHA1
GSK3B
HELZ2
LMNA
BTRC
SUCLG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
RIN1
ZNRF1
HYLS1
RAB3GAP1
DENND2D
VPS37C
NIBAN3
WDR74
TTC21A
GORASP1
ARIH2
CTTN
LNPEP
SLC2A5
ALCAM
SPATA4
TMEM229B
DDHD1
PPFIBP2
SNAPC3
FAM160A1
ARID5A
FRA10AC1
CD28
RFC2
CYP1B1
MC1R
FGF2
CCR1
GNA13
LSP1
PIK3CA
CCL3
COA6
APOBR
CYP51A1
MAD2L1BP
KIF13A
LGMN
ZBP1
SELPLG
RASA1
AMZ1
AFF3
CUEDC1
PLEKHG6
WNT1
ESR1
DOCK10
DDX3Y
UTRN
SERF2
ELL3
PSIP1
CXCR3
YARS1
GSPT1
BANK1
DGKD
CKAP2
SNTB2
LZTFL1
CCL4
PIKFYVE
TADA1
PLEKHG1
NOTCH2
RPS3A
SMG6
RBSN
MAP1LC3B2
RFFL
SLC39A13
LDLRAD4
NDFIP2
RGS1
PARP1
NFKBIZ
MAD1L1
BIRC3
PSMC3IP
PDE2A
ATP2C1
UHRF2
SYTL3
PIGV
SH2B3
LAMP3
CNIH1
ASAP1
TSACC
CCT3
DBNDD1
ABCD2
DERL1
NCOA3
TENT4B
DOHH
ZNF302
SYPL1
FAM234A
SLC3A2
SEC14L1
PTPN12
BCL9L
RASGRF1
SPTY2D1
MGAT1
ZMYM4
RAD52
DMXL2
SDCCAG8
RASSF2
CEP170
ACSS1
LAT2
RPRD1A
HSBP1L1
TACC1
KANSL1L
NAA16
MTRF1
NCF4
PARVB
C1orf127
TMEM41B
HES1
OGG1
TARS3
SLFN12L
ZNF705E
ATAD2B
ARHGAP31
NSUN6
ICAM1
SMARCC1
ZNF341
WDR41
CD38
ARL5B
CD55
SRSF5
CLN5
ABI1
GRIK4
CCDC114
STRADA
FAM118A
HECTD1
TIMM17A
RNF125
CREB1
ASNS
TRIAP1
C3orf86
SIRT1
CLUAP1
BHLHE40
ICE2
ITGA4
SHQ1
TRAF3IP3
GCNT1
USP6NL
CD1A
TNFRSF14
GTF2A2
ELF2
GPR141
SLC4A4
CD59
DUSP2
ZNF397
ZPBP2
OR2T1
LOC283710
PIGX
CEP19
C9orf72
TSGA10
GALM
IL6ST
EHF
ZFP69B
TBC1D22A
MAPK1
ZYG11B
LILRB1
ZFP3
COPS4
ABLIM1
TTLL12
CFLAR
SLC26A11
SPECC1
TFAM
ARHGEF3
RARG
KLRD1
ARHGAP45
ELMO2
EVI5
CD101
TPR
ODR4
TOM1
KRI1
WDFY4
TYW3
CRYZ
CBLL1
APELA
ENPP2
FKBP5
NPIPB2
SPAG8
PRPF40B
CLEC2D
GPR171
EXOSC4
RNF139
GABARAPL1
CHIC2
CCPG1
C15orf65
CLDN12
DSTYK
TLNRD1
PJA2
TNFRSF17
CSK
GPR68
H6PD
CLEC7A
TMBIM4
EHD1
CYS1
SLC1A4
MS4A1
TPD52L2
IQGAP2
ARF6
RMND5B
PIK3R2
SORBS1
NINJ2
ZP3
STING1
CCDC130
POLI
ZNF500
TNFRSF10C
ZZZ3
CCDC117
MYCBP2
F2RL3
DEF8
MZB1
FAM8A1
LRRC34
ARHGAP25
TNFAIP8L2-SCNM1
TNFAIP8L2
THUMPD3
TLR1
CYB561A3
BPHL
AIM2
SLFN13
AKAP13
CTSZ
TMBIM1
KCTD6
CD79A
ZBTB45
ACAA2
RGS14
PKIG
LASP1
IL4I1
DSE
KCNJ1
SS18
HSH2D
GHRL
MYL12A
PCM1
RBM6
HSPA4L
PTPN22
IL16
ZGPAT
PSD4
ARFRP1
NTMT1
SMPD1
SMAGP
CCL22
ARSB
HMGCL
UPF2
TCTEX1D2
RRM2B
EPB41L2
CA13
HLA-DMB
FLCN
SLC25A37
RAD50
PPCDC
MBD6
DYNC2H1
RBM43
FBXO10
PLD3
TRIP11
TBL1X
PRND
OSBPL8
GZF1
GPX4
NUF2
ZNF799
ZNF565
GABPB1
AP2A2
TSC22D2
NFE2L1
PICALM
METTL7A
TMEM147
SEC23B
NR3C1
TRMT6
MCM8
SEPTIN9
NADK
EIF4ENIF1
OXR1
BOD1L1
ZNF146
PPP1R16B
BRIX1
SC5D
CAPS2
C17orf49
ARL6IP1
UPF3A
VTA1
NMBR
NDUFA4
IDO1
DPY19L4
GCFC2
BCL2L13
CCNI
CDK13
WASL
SSX2IP
HNRNPUL1
LY9
ACVR2A
SKIL
ZNF821
SYAP1
SLC35B3
FCRL6
ANXA5
FUS
GTF2E2
TMEM123
GPN1
CCDC121
CNPY3
NANOS1
MVB12A
BST2
KMT2A
CLCC1
DEGS1
ZBED5
TARS2
PCMT1
RAD51
MDM2
B3GALNT2
MX2
SIKE1
HECTD4
SFT2D3
CCDC88A
SAMD10
SPATA6L
MFSD3
CCDC28B
P2RY8
LOC645177
C12orf77
CARMIL1
BATF
BIRC2
CLECL1
NBPF15
MOSPD3
BNIP3
LACC1
CCDC122
TMEM37
NOS1AP
CEP83
ANXA2R
ESYT2
STK11IP
TPM1
PPA2
CBLB
SLCO4C1
C5orf34
ASB1
ZNF529
PIMREG
CNTRL
CTDSPL2
TIPARP
CCR7
IL21R
CAMK2D
YAF2
SAC3D1
SPAG1
GADD45B
LTK
OGFRL1
MRPS23
NAT10
PRDM1
SCD
ZNF443
RPL22L1
TASL
WASHC3
LPXN
ANKRD13C
SMG1
PROSER3
HSPB6
ATP6V1A
SCARB2
FAM47E
TAGLN2
TRIM2
TP63
TFAP2A
NSFL1C
SLC12A2
PRKCI
QSER1
CTH
CCL3L3
CCL3L1
SKI
HNRNPA2B1
CBX3
RLIM
RBM47
SPTBN5
ZCCHC3
IFI27L1
DDX24
NBEAL2
EIF1B
SYNJ1
HERPUD1
PIGK
MCUB
CYB561
CTDP1
TJP2
MRPS18C
HELQ
HOPX
GRAP2
CD48
C16orf54
GPR146
CTSC
TMEM266
MGP
MPC1
ZNF318
GAN
ADA2
NINJ1
ARHGAP30
RCOR1
TNNI2
UGCG
NET1
ITGAX
AP1G1
DIPK2A
WDR24
PLGRKT
SSH2
COX7A2
COPB1
PTPN2
PREPL
IGFLR1
SRGN
STYK1
FTH1
CEP192
TMEM267
SLC37A2
FAM135A
TOP2B
PPM1A
CYFIP2
KAT7
NUP153
DCP1B
SNAP29
PI4KA
NIBAN1
POLDIP3
ZNF292
ARHGAP15
ZBTB21
NFKB2
DENND6A
NCF1
KSR1
MTIF2
UBE2L5
HUS1
CBWD5
LATS1
PALD1
USP30
FNTA
CHCHD3
PCBP1
UBALD2
CDC14B
DENND4A
AQP3
MTMR4
VWA7
SIGLEC10
TRIM40
WDCP
HMGA1
MTMR12
EVL
EGR2
FKBP15
MGAT5
CCDC50
KCNN3
RWDD2A
PGM3
PTGER4
RPS6KA1
ANKRD46
SLC35D1
XPO6
UBAC1
ETFRF1
CFAP94
FCRL4
ZFP91
DYM
ERBIN
RB1
RMND1
ARMT1
METTL15
KIF18A
TMEM39A
ODAPH
POFUT2
EHBP1L1
EIF4A1
HEXB
POLE3
C9orf43
CD244
IL10RA
POLR3B
TRAF4
SLC48A1
NBN
FAF2
CCDC9
DHTKD1
THOC1
C5orf51
H4C12
DCLRE1B
RARA
LOC388282
REXO2
CHKA
CD36
TNPO1
EXOSC9
SAXO1
RRAGA
KIAA1217
TSPAN14
TBCB
POLR2I
ALOX5AP
MICAL1
TTC39C
ZBTB43
PLCXD2
EXD2
USP22
DDX42
CCDC47
ADIPOR2
VPS29
RAD9B
ZKSCAN3
RGL2
ZNF692
KDM3A
MEMO1
ZKSCAN2
CSTF2T
ACTR6
SHBG
ANKRD26
LEUTX
PPIL2
PIAS2
KATNAL2
AP4B1
CASP8
CCDC97
PRKACG
AMPD3
LAIR1
PRKRA
PJVK
NEURL2
MIA2
CTSA
ZNF561
CFHR4
CCM2
ECI1
TIMP1
USP16
H4C4
TNFSF14
SPTLC3
PACSIN2
ZC3H12C
BORCS5
MAK
UCHL5
RO60
MICOS13
HSD11B1L
TMEM39B
GTPBP8
RDX
SAT2
RPA2
RASAL2
CHRNA1
TAB2
CCL4L2
TRIM34
LIMD2
DRAP1
C11orf68
NUP133
CCDC15
IDE
CYB5R2
RIC1
CCR5
AHI1
CLIC1
IFNG
ADARB2
RNF19A
TNRC6B
NKG7
ELP3
CPPED1
N4BP3
MIOS
MRPL53
RNF141
GCLM
KIAA1841
TMC6
TDRD7
ACKR3
TMEM260
CTNNBL1
NCOA7
HMGB1
FSD2
CBWD3
MALT1
SKA2
TXLNB
SLC25A51
FCER2
CBWD6
IL12RB1
ARHGAP17
SFSWAP
MGRN1
TTC30B
CLDND2
SLC39A8
PRR11
MNS1
ANP32E
ZBTB20
ARHGEF9
MSL2
PPM1M
DTX4
RGS3
NUDT9
NAPA
SUCLG1
ZSCAN31
KBTBD6
C2orf42
DST
LPAR5
INTS10
IKZF2
EPSTI1
RHOT1
CYP20A1
H2AZ2
TTC5
PYCR3
LRRC59
UBL5
SUGCT
PPIB
MPLKIP
FRMD4A
ELOF1
IL18RAP
GPAT4
CBR4
SURF6
NDUFC2-KCTD14
NDUFC2
ICAM2
SMAD4
RICTOR
EPRS1
ZNF446
EXOC5
AP5M1
RCBTB2
PACC1
ZNF3
NCR3
ATP5MC2
MMS22L
NEK8
SEMA4A
ZNF763
ARL5A
GPR55
STAT1
NELFA
SPAG9
TMX4
DLAT
SEC31A
TBL3
PPP1CC
NFKBIA
NAGLU
VKORC1L1
LRRC43
NUTF2
CENPT
OCIAD1
BBS2
BZW1
SRBD1
NAA35
INSC
ELK4
NOTCH1
SLC14A2
SCAMP1
LEPROTL1
TAF15
CHFR
TRIM38
CAMSAP2
PDAP1
BUD31
SMC3
RPAIN
NUP88
RFESD
FBXO4
INTS4
CFP
EIF2B5
DDX60
ANKRD13D
DSCAML1
KIFBP
MEF2C
TICAM2
CAP1
ZNF230
NUCB2
TC2N
TBCEL-TECTA
TBCEL
PCYT1A
SH3TC1
PRPSAP1
RPS8
NFU1
UPP1
GALNT5
CEBPZ
TRIB1
ITGB8
CD86
PPIA
ZNF267
IL12A
ITGAL
ZNF181
ZNF584
SNX3
GEM
PEX12
DARS1
CEP63
ANAPC13
ASXL2
UGGT2
TPGS1
PARP15
RPL22
RHBDL3
CTNNAL1
NKD1
GTPBP10
DHX8
GPR18
RBPJ
SLC50A1
TAX1BP1
CFAP298-TCP10L
CFAP298
SLC7A6OS
PRMT7
DNAJC10
ABCC11
NUFIP1
GPALPP1
IVNS1ABP
LZTR1
TICAM1
CD164
CREM
MAPKBP1
PA2G4
ZNF101
MTA3
SCIMP
COASY
ACSL1
MBNL1
SUSD1
NKIRAS1
DNAJC2
CTRB1
CBFB
DYNC1H1
SELENOH
FOCAD
ZNF148
CCDC171
USP3
ATP9B
LIMS1
WWOX
E2F4
MCC
LMNB1
GKAP1
FBXO8
CEP44
SYT5
RNASEH1
IFI16
ZNF142
BCS1L
RCC1
GCA
RGL4
TMEM9B
SYNPO2L
SFXN5
FSCN1
ABL1
WNT5B
CXorf58
CD226
SS18L2
BRPF1
BID
CANT1
USP28
DCLRE1C
CKAP5
SNX10
PPP1R18
TPD52
LONP2
SIGLEC6
BIN2
DDX23
RNFT1
KDM3B
LSM14B
SQLE
DUSP14
DEF6
TIAL1
TACSTD2
CIAO2B
CES2
TUBB2A
RIPK1
RIOK1
NME7
CAGE1
BLZF1
KDM1A
SEMA7A
NHEJ1
KAZALD1
CLNS1A
FNDC11
TNFSF15
TMEM115
PPIL3
NIF3L1
NCKAP5L
NCF2
DENND5B
RPL3
JOSD1