ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13681308 | Lymphoblastoid cell line
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◣ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

RAB4B
FAM160A1
PTK2
RUNX1
DDX3Y
HELZ2
PLEKHA1
SUCLG2
GSK3B
SLC2A5
NIBAN3
LMNA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RAB3GAP1
VPS37C
DENND2D
AMZ1
TMEM229B
RIN1
ALCAM
FGF2
CTTN
YARS1
LNPEP
SERF2
ELL3
WDR74
CXCR3
GRHL3
CCL3
ARID5A
PARP1
DDHD1
RFC2
ARIH2
AFF3
PIKFYVE
CKAP2
RUNX3
LSP1
SNAPC3
PIK3CA
LDLRAD4
CD28
SMG6
SH2B3
GNA13
DOCK10
KANSL1L
RFFL
HYLS1
HES1
MAP1LC3B2
ABI1
NDFIP2
UHRF2
ZNRF1
CNIH1
DMXL2
NOTCH2
SDCCAG8
CEP170
DGKD
LZTFL1
APOBR
SPATA4
CYP1B1
PPFIBP2
BANK1
UTRN
PTPN12
ESR1
CYP51A1
SLC39A13
SELPLG
TMEM41B
ABCD2
ICAM1
NCOA3
TTC21A
GORASP1
DUSP2
MAD1L1
LGMN
CCL4
LAT2
COA6
NINJ2
RASA1
APELA
TACC1
ZNF341
ASNS
ZBP1
SEC14L1
CD38
ATAD2B
PLEKHG6
ATP2C1
NCF4
ARHGAP31
FRA10AC1
JAG1
CCR1
MC1R
PARVB
CUEDC1
BHLHE40
PSMC3IP
SKIL
STRADA
ELF2
MAD2L1BP
SIRT1
PIGV
ACSS1
SNTB2
TYW3
CRYZ
LAMP3
RASGRF1
ZNF302
MGAT1
RASSF2
NFKBIZ
BTRC
USP6NL
TLR1
SYPL1
BIRC3
ITGA4
CSK
CFLAR
PPCDC
TSACC
CCT3
RNF125
MAPK1
CREB1
GALM
SPTY2D1
PLEKHG1
BCL2L13
CD79A
WNT1
F2RL3
RGS1
SYTL3
ZFP3
FUS
KIF13A
TADA1
UBE2L5
WDFY4
NPIPB2
TNFRSF17
SS18
CLCC1
WDR41
TCTEX1D2
METTL7A
SMARCC1
LILRB1
GPX4
GCNT1
CD59
GPR171
AIM2
MS4A1
RBSN
ZYG11B
TLNRD1
TNFRSF14
IQGAP2
ZPBP2
AKAP13
PSIP1
CCPG1
C15orf65
CTSZ
CD55
OGFRL1
ANXA2R
DBNDD1
PCMT1
TRAF3IP3
ZNF397
LOC283710
GTF2E2
FAM234A
CAPS2
TBC1D22A
RMND5B
SLC1A4
GSPT1
SLC26A11
TNFRSF10C
HSPA4L
TSC22D2
ASAP1
MBD6
ZNF705E
RBM6
KCNN3
HECTD1
GPR68
GADD45B
SPAG8
PTGER4
RICTOR
CARMIL1
BIRC2
MFSD3
ZZZ3
RPRD1A
ZNF799
SRSF5
CCDC114
SLC48A1
NIBAN1
IL6ST
PICALM
OGG1
MALT1
KRI1
MDM2
PJA2
CDK13
ZMYM4
RRM2B
NSUN6
ARL5B
ZNF763
CHIC2
C9orf72
HLA-DMB
UPF3A
EXOSC4
PIK3R2
CBLB
DSE
POLI
GRIK4
ARF6
N4BP3
ABLIM1
FBXO10
CYS1
IL16
RB1
SPECC1
CLDN12
SH3TC1
BNIP3
RDX
CMPK2
MYCBP2
RAD50
SLFN12L
WASL
TTLL12
PSD4
MIOS
RPS3A
SLC3A2
ZNF318
UBALD2
MGRN1
ARSB
TFAP2A
GPR141
CNPY3
TENT4B
PRND
RGS14
CBLL1
FAM168B
LRRK2
RFESD
OR4C16
ARHGAP25
H6PD
SPAG1
ZNF878
SLC12A2
FKBP5
SMAGP
TRIAP1
HSH2D
IFNG
ARHGAP45
TAGLN2
DEF8
GZF1
TFAM
CLECL1
ZC3H12C
PARP15
AP2A2
ZNF687
IL21R
RNF19A
CTDP1
XPO6
CCDC117
ZFP69B
NAA16
MTRF1
TNNI2
KAZALD1
BCL9L
TMEM123
UPF2
NR3C1
SCD
AQP3
SLC35D1
IKZF2
AHI1
ASB1
PCBP1
KCTD6
IL4I1
RAD52
TMBIM1
NTMT1
WASHC3
HMGA1
YAF2
P2RY8
RHOT1
NTRK2
SMG1
IDO1
TARS2
PPA2
LTK
PLD3
QSER1
TMBIM4
FTH1
NDUFA4
COPB1
MTMR12
CAMK1D
CLEC2D
LASP1
SLC4A4
SYNJ1
MYL12A
CLEC7A
TIPARP
UGCG
TIMM17A
IFI27L1
DDX24
RGS3
VKORC1L1
FRMD4A
TOM1
CAMK2D
FCER2
CCDC88A
DSCAML1
USP3
NADK
FBXO4
BOD1L1
MCUB
SLFN13
ZBTB21
MGAT5
SPIB
FAM135A
H4C12
ZNF700
MBNL1
CEP83
SCARB2
FAM47E
GCLM
PIGX
CEP19
COPS4
CBFB
FCRL4
SASH1
ZNF292
ATP2B1
SC5D
ZGPAT
ARFRP1
ZNF443
C3orf86
ENO3
PFN1
CD101
RIPK1
DCP1B
NUDT9
ANXA5
ZBED5
PRPF40B
TOP2B
PLGRKT
SKI
PPM1A
NEUROG2
TSGA10
NEURL2
CTSA
TPR
ODR4
MVB12A
BST2
PIMREG
DDX42
CCDC47
PPP1R16B
CD48
TRIM34
EHD1
KCNAB2
B3GALNT2
ELL
ICE2
SHQ1
RBM47
TNFSF15
NFE2L1
HNF4G
CLUAP1
NBEAL2
C1orf127
ERBIN
RAP1GDS1
SFT2D3
MTMR4
UPP1
ZBTB45
CXCR4
TMEM37
NEK8
TLCD1
MPC1
PKIG
CASP8
CYFIP2
PPIA
DUSP14
ELMO2
RCBTB2
ZBTB18
NANOS1
GXYLT1
HNRNPA2B1
CBX3
MNS1
SRBD1
ANK3
BRIX1
SLCO4C1
TMEM267
NBN
IDE
C17orf49
CCDC28B
LPXN
ZFP91
TNFAIP8L2-SCNM1
TNFAIP8L2
PIAS2
KATNAL2
GKAP1
RCOR1
PRKACG
PDXK
RBM43
SH3BP2
SYAP1
GPR146
MX2
SAXO1
RRAGA
TMEM30A
TPD52L2
CCR7
POLE3
C9orf43
POLD4
RLIM
HMGB1
USP28
ARHGAP30
SAC3D1
ZBED4
DENND4B
GHRL
EVL
PLEK
PCCA
TLR4
TRIB1
H4C11
LY9
CD1A
RPS6KA1
BORCS5
COL19A1
RAD51
HECTD4
ATP6V1A
NFKBIA
CIITA
GTF2A2
SNX3
HNRNPUL1
IL10RA
ZNF44
MYADM
CYB561
SORBS1
ARHGAP17
SMPD1
EXOC5
AP5M1
LPIN2
TRMT6
MCM8
ENPP2
SLC39A8
PCM1
MEMO1
STK11IP
DENND6A
GEM
PA2G4
CCL5
BEND6
RPL22L1
TP63
DYNC2H1
LOC645177
C12orf77
C5orf34
ADARB2
ACVR2A
ICAM2
RBM38
EIF4ENIF1
DPY19L4
MICAL1
DALRD3
NDUFAF3
FAM8A1
SLC35B3
ESYT2
CTSC
ELK4
MTHFS
EPSTI1
ACOT7
RMND1
ARMT1
RNF141
TNRC6A
POLDIP3
TNRC6B
OSBPL8
KMT2A
C15orf62
GSE1
ZFP36L1
DLAT
SAYSD1
PIK3CB
RAPH1
LIMD2
SETD5
POFUT2
LRRC8D
DEGS1
RASSF7
LMNTD2
TRIM2
SSX2IP
CTH
CFHR4
NCKAP5L
GAN
SMAP1
CDCA7
TMC6
ST3GAL3
ACAA2
BATF
CTDSPL2
CLDND2
TMEM266
DHTKD1
CCDC130
TRAF4
BIN2
MYO1G
LOC388282
SPTBN5
CYB561A3
MTIF2
DDX60
CA13
NAPEPLD
PRDM1
SMC3
ATPAF1
RPA2
LRRC34
ZKSCAN2
RBPJ
YPEL1
HPF1
TARS3
CTNNBL1
GNA11
MZB1
EXOSC9
SEPTIN9
STYK1
OXR1
DAG1
SYNE3
SNX24
NOS1AP
TBC1D1
MRTFA
ME1
SEMA4A
LATS1
EGR2
IL18RAP
E2F5
REPS2
TYROBP
H2AZ2
NUTF2
CENPT
SLC25A51
NFU1
ZNF670
GABPB1
RIC1
GALNT5
FDX1
ZMYM5
DOHH
PTPN2
BZW1
KIFBP
NUP153
ANKRD46
DCLRE1B
AP4B1
LAIR1
YY1AP1
DAP3
ASPHD2
UGT2B17
ETFRF1
CFAP94
SCAMP1
JMJD1C
REEP3
SLC25A37
GCFC2
IL2RB
SLC50A1
RET
NKIRAS1
DYNC1H1
GNPNAT1
NR1D2
SEC23B
ANKRD13C
MIA2
CBR4
SMIM14
ARL6IP1
ITGB8
RELA
PAK2
TUBB4B
HUS1
TOR1AIP1
SECISBP2
TBL1X
ANTKMT
MOSPD3
TMEM39B
CD164
BCL2A1
DYM
IL12RB1
CDK19
AMD1
EHF
DENND4A
ITGAL
RMDN2
GIGYF1
NSMAF
MTMR1
GCNT2
EVI5
FLCN
SIGLEC10
KIAA1841
CEP63
ANAPC13
GCA
IFIH1
SSH2
GPN1
CCDC121
UGGT2
WDR1
RPAP3
PTPN22
TXLNB
PDAP1
BUD31
RNASEH1
KCNK10
ADI1
CLOCK
ZNF267
RUFY3
SYNCRIP
LACC1
CCDC122
CYB5R2
PREPL
TACSTD2
VTA1
NMBR
AP1G1
IVNS1ABP
EIF4A1
ASH1L
FSD1L
TAB2
CORO1A
KBTBD2
TJP2
TRIM38
CLN5
ZCCHC3
IRF5
ASPSCR1
PACS1
TRIM22
ASXL2
CCL22
ADO
STRBP
GABARAPL1
CFP
MTA3
ITGAX
TMEM260
IRF8
RAB20
SPTLC2
IGF2BP3
THUMPD3
SRGN
FNTA
PPP1R18
TMEM65
DSTYK
RWDD2A
PGM3
ANP32E
DTNBP1
N4BP2
NFAM1
GGT1
STING1
MAK
C6orf62
SQLE
TNFRSF11B
COLEC10
NFATC3
BPHL
LRRC58
TTC30B
RASGEF1B
SURF4
CCDC198
S1PR1
TSTD3
GLCCI1
OXCT2
FAM118A
ARHGEF9
MARCHF3
DIPK2A
GPAT4
ITGB1
HEXB
KDM3B
RNF44
CNTRL
FAM102B
LEPROTL1
BMPR2
SEMA7A
UFL1
WFDC2
SUSD1
CSRNP1
NMB
CYP20A1
CCDC50
ZNF446
ANKRD13D
PDIK1L
CAPZB
DST
ACADM
NAPA
ABL1
OTUD1
ZNF500
CCDC9
SMAD4
TMCC1
CAP1
MAPKBP1
GPR84
RAB6A
LMNB1
UBE2E1
TNFRSF10B
GRAP2
NINJ1
KSR1
DCLRE1C
APH1A
CD40
CR2
ZBTB25
ZBTB1
COX7A2
GTPBP8
DNAJC10
FBXL5
NCF1
ALOX5AP
USP22
OTOA
NREP
NCOA2
GPC5
BMP2K
CLIC1
STXBP5
CHKA
CAMSAP2
ATM
DCUN1D2
SLC37A2
PPP1CC
VEZF1
USP32
LMO7
PMVK
PAH
ASCL1
UCHL5
RO60
TAF15
MAGEF1
ZNFX1
CBX6
UBAC1
ECI1
RASAL2
NDUFC2-KCTD14
NDUFC2
EPRS1
NCF2
PHLDB2
OR2T1
EPB41L2
ADIPOR2
CIZ1
ARSG
C16orf54
SLC16A7
TRAM2
KIF21A
ABCA5
TBC1D9B
CCL4L2
BRPF1
PXT1
KCTD20
FMR1
TKFC
DDB1
GPR55
MEF2C
SCIMP
LZTR1
KLF13
POLR3G
MBLAC2
INPP5D
BBS2
SS18L2
ARHGAP24
SETX
TPGS1
C19orf47
PTPRCAP
GFI1
CD47
MUC13
TSPAN14
ZNF561
NSMCE3
LATS2
CCDC112
SPATA13
ZC3H12D
YPEL3
TPM1
INTS4
SCAP
STK10
DLGAP1
TRIP11
NEK6
RBM33
NBPF15
MRPL53
MED14
PTCH1
KLF6
TLE4
NCOA7
SRD5A3
VASP
NKD1
AP1S2
PIM1
SNX30
DLX2
RETREG2
CNPPD1
ZEB1
KPNA3
CPNE2
ZFHX3
NET1
ZNF692
DENND5B
TNFSF14
THBS4
MTX3
HERC4
MIDEAS
DRAP1
C11orf68
BUB1
PUM1
MAP1B
CD200R1L
HERPUD1
PPIL3
NIF3L1
C11orf80
LYST
PLAAT2
FGFR1
ZNF592
TLL2
RGL2
NEDD9
POMP
MX1
YY1
UBL5
SPAG9
FXYD2
TMEM62
SYT5
NUCKS1