ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017710 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◣ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

ZNFX1
EEF1A1
H3C15
H3C14
H2AC19
H2AC18
EIF3E
B2M
KRT36
GTF2B
RUNDC3B
POLDIP3
TMEM107
PRDX1
SRSF7
FUS
TRAF7
H2BC11
H2AC11
H2BC21
H2AC21
H2AC20
NME1-NME2
NME1
DDB2
RPS29
SRSF2
MFSD11
TSPOAP1
NAT10
RCC1
PMAIP1
DDX5
ANGEL1
USP53
PLEC
AMD1
MAGOH
MTRNR2L1
TMEM238
RPL28
TUBB4B
RPS27
RAB13
RANBP2
RPL27
RPS20
RPLP1
ZC3H10
RPL41
TFPT
PRPF31
LY9
SSNA1
RPL10
ANAPC2
RALGDS
SNX5
MGME1
GIPR
CSRNP1
PREX1
NDUFS7
SIRT4
BTG1
IFRD1
CWC25
RNF149
MAP3K14
ZBTB4
SLC35G6
POLR2A
SYTL3
H2AX
MFSD4B
RASA3
HNRNPA1
CWF19L1
CBX5
H2BC5
H1-4
THBS4
RPTOR
MTX3
RPL29
ASB2
H4C15
H4C14
AMZ2
CALM2
HSP90AB1
MRPL44
SLC43A3
PSMD9
HPD
ZBTB37
H2BC8
H2AC8
H4C3
H1-6
TAF12
SH2D2A
NTRK1
BCAR3
IRF9
DEF6
IL1R1
FOXO1
TPD52
EIF4G2
TRMT61B
HAX1
DENR
NPAS4
CLK1
AP3S2
JUN
BRD2
ZBTB40
IRF1
BCL2A1
GADD45B
IQGAP2
NUP62
IL4I1
ATF5
SLC7A5
RPS6
FASLG
SSBP1
LTA
SOCS3
NUFIP1
NOP58
GPALPP1
NOLC1
CD226
CAMLG
HERPUD1
VPS72
H4C12
H4C11
POFUT1
PLAGL2
PIEZO1
MRPS23
CKS2
ID1
ZZEF1
SRGN
CYB5D2
UNC45B
RPL10A
ATP5MC3
ARID5B
MRPS18B
RAD23A
CCNL1
IL21R
PCNA
KMT2E
RSRP1
TUT1
REV3L
RANGAP1
APTX
STOML2
RUNX1
MRFAP1
CSTF1
AURKA
TNF
RPS13
GPR84
ENO1
CDC42
ID2
TLE3
SAR1B
CENPM
LUC7L2
FMC1-LUC7L2
FMC1
PTBP1
GALK2
DDX19A
COPS2
RPLP0
EEF2
STK40
RAB7A
SLC3A2
RRM1
RPL23A
RAB34
NR1H3
ILF3
ACP2
WBP1
OXSM
NGLY1
MRPL24
ITGAL
INO80B
DCP1A
EIF1
TMEM79
SMG5
STX10
RPLP2
PIDD1
IER2
FBXW9
CBX6
MTF2
MMACHC
HPS5
GTF2H1
CCDC163
C16orf91
POLR3E
HNRNPH1
RSL1D1
DNAJA3
GTPBP6
NGB
NSA2
MBOAT4
GSDMD
GFM2
EHD4
SRSF1
RAC2
NOC4L
DNAJC16
DDX51
CASP9
ANAPC10
ABCE1
METTL16
ITPR1
CCDC91
UBE2I
SDCBP2
RNF167
PFN1
EIF4A1
YARS1
S100PBP
KCNAB2
GNG3
BSCL2
TXNRD1
ZNF79
XPC
RPL9
PRMT5
MRPS14
LSM3
LIAS
CAPN15
EHD1
ZNF132
PPP4R3A
PGAM1
NAA16
MTRF1
GABPA
ATP5PF
APOBEC3A_B
APOBEC3A
ZNF526
NABP1
FBXL22
DEDD2
BTF3
DDIT4
TBL1XR1
CXXC1
TRAF2
H2BC12
H2AC12
SFPQ
DENND1B
NUP54
MYL6B
MAP4K1
EIF3K
DPP9
DDX21
C2orf42
FAM102A
SRSF5
NANOS3
H4C1
H3C1
H1-1
H4C4
RBM3
TRA2B
THADA
TCAF2
SPAG7
SIRT6
SH2D1A
CDV3
ANKRD24
AIM2
SLC1A5
MTHFD2
ATF3
FBXO31
ISG15
AGRN
TSSC4
RGL4
RBM17
RPL38
YTHDC1
OCIAD1
NR4A3
MORC3
NOB1
SF3A3
PAFAH2
MITD1
MAK16
LYST
FADD
SEPTIN7
RMND1
NUFIP2
ARMT1
PKNOX1
LARS2
CDK12
C8orf37
NDUFB5
MRPL47
MAP3K7CL
CHPF2
CCT8
C1orf198
RBMX
HNRNPA3
HSP90AA1
RPS15
MYO9B
HAUS8
HNRNPAB
SLC12A6
SF3B1
RPL15
RPL12
RGPD8
RGPD5
PURB
PPP1R15A
NUTM1
NOP10
NKIRAS1
LRSAM1
IL23R
CHD8
WDR4
TCTA
RHOA
EIF3J
BANP
RGPD2
RGPD1
SKP1
TNFSF14
SLFN13
SAMD4B
MKLN1
LSM5
CITED2
AVL9
ZNF101
WDPCP
TRMT2A
RANBP1
RAB6A
MDH1
ETFBKMT
ATP13A1
LRRFIP2
HEXIM1
ZNF655
SCAF11
RBM18
POU2AF1
MRRF
MRPL55
KIF15
KIAA1143
CPNE5
COX5B
SLC25A51
CLN3
B3GAT3
APOBR
C19orf48
ZNF106
SPRYD4
SNAP23
RPL22L1
RETSAT
CD209
ASXL2
TMEM101
SNX9
RNF213
NLRC5
KRR1
GPN2
CCDC107
MAPKAPK5
TSPYL2
PPP1R8
MSL2
METTL3
LRRC61
LONP1
CCNT1
CATSPERD
ACTR3C
TMEM259
CNN2
RHBDD1
PNP
COX8A
DNAJB4
SH3BGRL3
PPIL4
RPS2
RNF151
PCGF2
STT3A
ZNF207
ZMPSTE24
TXN2
SUPT5H
SNRPE
SHF
RSL24D1
RFFL
MOK
LAX1
H1-3
ENOSF1
EFNA4
CCM2
ALG10B
AEN
SHISA5
RPF2
MRPL45
GTF2H3
EIF2B1
SEMA3B
RPS12
TRAFD1
TOGARAM1
SERP1
RBM25
NOP16
KSR1
KMT2D
KLHL28
HIGD2A
FURIN
EIF2A
CD69
CASP8
BTRC
NUP214
IMPDH2
IER3
FLOT1
ZNF764
SCAND1
LMNA
HMGN4
DNAJB2
MBD6
DDIT3
TBRG4
SERBP1
PRRC2C
POLA2
OSM
FAM241A
CAMSAP1
AP2B1
ALG1
ZNF320
PLEKHA4
PLD6
ATP5MC2
CCR7
H3-3B
ZNF3
VTA1
UNK
RRNAD1
NMBR
ISG20L2
DDI2
CRADD
ATG5
SLC2A11
NCK2
TATDN2
SPHK2
SPG7
RPL18
ITPRIP
ITFG2
GTF2IRD1
FAM83E
H2BC4
H2AC6
IER5
VMAC
TRAF5
TMEM70
TCF7
PRPF19
NECAP1
NDUFA11
ELOC
MRPS7
GGA3
CIRBP
SACM1L
TAP1
SPATA5L1
RPS16
RPL14
RNF224
RNF208
QTRT2
PSMB9
GATM
DUS2
DDX28
CYSRT1
CCDC191
CCDC174
NASP
MCCC1
IARS1
HSD17B12
H3C13
H2BC18
FAM227B
DTWD1
COG3
ASB8
ADORA2A
MAP2K7
SENP8
RPL34
PITPNM1
NRIP3
MYO9A
BORCS5
TMF1
SLC26A2
PPME1
MORF4L1
CD55
CCAR2
C8orf58
C2CD3
ZNF688
WDR19
THOC1
MZF1
ARF4
ADARB1
WDR74
TUBA1C
PPM1K
NPM1
METTL1
KANSL2
IPO7
GOPC
EID2B
EEF1AKMT3
CYP27B1
C1orf53
TICAM2
TOMM5
RPS3A
RBPJ
N6AMT1
DSTYK
CLP1
CD96
TAF1D
GTPBP10
FBRS
C11orf54
AMN1
ABCD3
MACO1
NXF1
LBH
RPL13A
HIBADH
XRRA1
VASP
SPCS2
SMIM12
SACS
RPA2
NACA
LRP8
IL10RA
HM13
DYNC2I1
SNRPB2
SF3B5
MORN3
IFNAR2
APOBEC3B
RNF126
PRRT2
PNPLA8
PAGR1
MVP
GPR68
EMP1
DDX18
CLK4
NFKBIL1
DDX39B
ATP6V1G2
FAF1
TOMM20
ERLIN1
SP2
STX11
ACTR1B
ZFC3H1
TOMM6
TMIGD1
THAP2
SLC30A6
SLC25A23
SEC14L1
HILPDA
CRB3
PTCD2
POLG
MYO18A
MRPS27
MLH1
GPR183
EPM2AIP1
NOL7
NFU1
LSM14A
ABCC11
G3BP1
MKRN2OS
MKRN2
USPL1
NFYC
LONP2
INSIG1
HMGB1
EIF4B
SLC25A45
LDHA
ZNF589
UQCRC1
SLC30A5
SLC27A5
PARP2
MFSD8
MED18
MARS1
FRMD8
FBXO4
ARHGAP9
ABHD18
ELK4
SETDB1
PPAN-P2RY11
PPAN
NDUFB6
MIS18A
CTDSPL2
ANGPTL6
MAT2A
JUNB
GPR137
GOLGA5
TSACC
RBM7
PRDM1
MRPS15
CCT3
C11orf71
BCL9
PDCD1
PBRM1
NUP42
NME4
NAGK
KXD1
GNL3
EPC1
AP4E1
SLC25A25
ZNF248
SLMAP
PREPL
EBAG9
COMMD9
CAMKMT
TOMM40
METTL26
WDR76
VPS35L
USP48
MFAP1
DUS3L
CUTC
COX15
EXOSC5
BCKDHA
PSMB10
NDUFAF5
GNG8
ESF1
ESCO1
CTRL
CDK13
C9orf72
TRAPPC4
THOC5
RPS25
MAP2K3
CSNK1A1
EVL
TAMM41
PSMD3
IL7R
HIVEP2
DPP4
LARP1
RAB18
NIP7
MLLT6
LOC100289561
HBS1L
GATB
EIF3D
CREM
COG8
MIDEAS
HDAC4
TRMO
PXMP4
PPP1R15B
POLR1F
NUF2
NSRP1
HINT3
GTF3C2
WRAP53
VMP1
TP53
RPS8
PTRH2
RCAN1
ABCA5
VCPKMT
TBC1D22A
RNF139
LYL1
IPO4
GUF1
CD247
ZNHIT1
SNX17
SAFB2
SAFB
RPL5
PLOD3
NR1H2
ELF2
EIF2B4
CACYBP
SPTBN4
BLVRB
UNG
KIFC1
FASTKD2
ARHGDIB
ALKBH2
SLC35A4
NUP205
COMMD1
CHFR
CCT4
APBB3
TSPAN5
ARIH2
MFSD14A
TRMT112
PRDX5
KIF11
COPS4
CLN5
CEP350
SCAMP1
PTK6
PPP1R11
PMS2
NOL11
AIMP2
ZCCHC7
TRMT10C
PISD
PHB2
IFT172
FAM122A
LOC102723996
ICOSLG
UPP1
LEO1
APOL2
RABGGTB
VPS29
RAD9B
RABGGTA
CYFIP2
ADAP1
TMEM186
STT3B
PMM2
ZNF33A
KMT2B
STX4
KNTC1
HEMK1
FAM71D
C3orf18
TMEM248
SRSF4
RNF34
GPN3
FAM216A
THRAP3
PABPC1
MRPL53
MBD1
CFLAR
BORCS6
TM9SF4
GRPEL1
RPS24
POLR3A
MRPS16
AARSD1
ZNHIT3
TMED5
CCDC18
TCTE3
ERMARD
AASDH
RBSN
DCLRE1B
AP4B1
UTP23
ATAD2B
PPP2R3B
NFATC2
SRRM1
ARL6IP1
CLUAP1
C16orf90
GREB1
CASP7
PDZK1
RARA
FKBP4
MYOG
PARD6B
ADAMTSL5
FREM2
VASN
KCNK6
RNF223
RPS6KL1
LMAN1L
DGKZ
RAPGEFL1
N4BP3
OVOL2
TPD52L1
TFF1
TH
SGK3
SYT12
C1QTNF1
CYP1B1
HAAO
CHPT1
FOXK1
SNX24
CCDC88C
CAP2
SFXN2
ARL3
FRG2C
TIPARP
CTBP1
SLC25A24
AMZ1
MCF2L
NBPF1
AKAP1
C19orf33
KDM4B
MANEAL
PTPA
CRAT
NAB2
NFKBIA
TMEM229B
PLEKHH1
B3GNT6
EDF1
CTAG2
C1QTNF6
HAPLN2
LY6E
USP31
PDGFA
ZNF185
ITPK1
CXXC5
MSMB
MYB
GPRIN1
STK11
APOA1
UPF1
ESR1
CABLES2
CLIC3
FRG2
LAMC1
CELSR2
DOK7
KEAP1
TTC39A
RGS10
DUX4
TFAP2C
LYPD6B
AFF1
SCOC
VPS26C
OLFML3
IPPK
FBP1
KRT85
CRKL
CST6
TMEM92
UMODL1
CCN5
PLIN5
LRG1
RAB40C
DMRT2
TBX2
LRRC56
HRAS
KIF21A
SEPTIN9
ADAM8
UNKL
KIAA0319
SPOP
TIFA
CUEDC1
SLC25A36
ARMCX6
SLC25A42
PKP3