ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932065 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◣ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
RARA
PDZK1
MYOG
CASP7
FKBP4
FREM2
RNF223
VASN
TPD52L1
OVOL2
PARD6B
TFF1
LMAN1L
ADAMTSL5
SGK3
DGKZ
CAP2
KCNK6
SYT12
CYP1B1
RAPGEFL1
RPS6KL1
NBPF1
CHPT1
TMEM229B
PLEKHH1
CCDC88C
SFXN2
ARL3
KDM4B
AMZ1
TH
PTPA
CRAT
HAAO
C1QTNF1
TMEM92
N4BP3
TIPARP
MSMB
MYB
MANEAL
HAPLN2
C19orf33
SLC25A24
NFKBIA
PDGFA
B3GNT6
CXXC5
ZNF185
ITPK1
AKAP1
SNX24
GPRIN1
USP31
LY6E
UPF1
FOXK1
ESR1
NAB2
RGS10
CELSR2
MAP3K14
TFAP2C
C1QTNF6
TBX2
APOA1
MIDEAS
DMRT2
EHF
STK11
TTC39A
LRRFIP2
FMN1
SCOC
DECR1
SLC25A45
CCN5
CTAG2
LAMC1
KEAP1
AFF1
UMODL1
SPOP
IPPK
TJAP1
COLEC12
SPTBN4
BLVRB
FAM102A
MCF2L
ADAM8
FRG2C
PLIN5
LRG1
DOK7
FBP1
KRT85
TTC6
FOXA1
SBNO2
VWA2
SEPTIN9
DNPEP
CUEDC1
KIF21A
VPS26C
ARMCX6
UHRF1
ABAT
KAT6B
FST
PDE4DIP
PAK4
ACACB
UGT2B15
CRKL
ABCC11
ARHGEF18
NPEPPS
CLIC3
SLC25A47
RAB40C
EDF1
BMP7
UNKL
TLE1
RCOR3
TIFA
SLC25A42
DHX37
BRI3BP
SERPINA1
CTBP1
CABLES2
MACC1
GRIK3
ELF1
IKBKG
CCR6
C1orf162
AGR3
LYPD6B
SLC25A36
FUT4
KIAA0319
SCGB3A1
FOXK2
YPEL2
SPATS2L
SVIL
CCNP
NT5DC3
MAD1L1
RERG
TBKBP1
ACSS1
TSKU
CHSY1
LRP5L
DUX4
LATS1
ZFP36
PLEKHG2
ADGRG1
OLFML3
TRH
SULT2B1
SYNE3
MRGPRG
TMED8
SAMD15
VCAN
SVEP1
CFAP206
CST6
ZBTB37
PSD4
SLC22A5
SYT8
MYZAP
GCOM1
GRM4
FRG2
CYP4F2
BAMBI
NXNL2
TUBA1A
ELAPOR1
C1orf194
CBWD5
CBWD3
AMBP
EFHD2
HDAC11
MAT1A
LRRC56
HRAS
ARID5B
SLC1A5
TXNRD1
C20orf203
PTGES
ADARB1
MAGI3
CBWD6
ZNF346
SGCA
LIMS1
SCARB1
TPD52L2
ABHD16B
SLC45A4
VEPH1
PRSS27
CLASP2
GFAP
TFAP2A
CDK3
TMEM212
ANXA9
NDRG1
MICOS10-NBL1
MICOS10
IL2RB
ADORA1
PDE4C
ANKRD2
TCIRG1
PRDX1
LONRF2
TMEM210
LRRC26
SHANK2
HSPA4
PKP3
NIPSNAP2
PERP
PPP2R2C
EDN1
GPSM1
CYP4F11
IL24
RPS6KA2
SSTR2
MGAT3
FAM214A
CBFA2T3
TP53I3
LFNG
ASB2
NR2F2
B4GALT1
TMEM95
KCTD11
MARCHF10
ATP6AP2
GPC6
REM2
INS
HK1
CASTOR1
APOC3
PXDC1
RGS3
DSN1
SPRY4
RHOBTB1
EIF5AL1
FSIP1
TTC39C
DHRS3
ZSWIM6
B3GALNT1
DHRS2
RALGPS2
ME3
LIMS4
LIMS3
ARHGAP29
SNAI1
RNF144A
PCYT1A
TWF2
CACNA1H
TPBG
LOC102723996
ICOSLG
TBXA2R
JARID2
LRRC58
ARFGEF2
PRUNE1
MINDY1
SLC26A1
IDUA
UBE2H
COX7A2L
FRMD5
TUBA3D
G6PD
PRDM4
CDR2L
SLC9A3R2
ABCB8
PNKD
TSPAN5
IER5L
FAM234B
ZFYVE28
CFAP99
ACIN1
AKNA
HSFX3
EOLA1
SLC6A6
RECQL4
LRRC14
MYLK2
CDC34
ITGB2
B3GNT3
GZF1
IL20
PAQR5
ABCA3
KRT24
PGLYRP2
UBALD1
MFSD10
ZNF552
GRAMD1A
CLDN2
HSPB1
HUWE1
OVOL1
FGFBP2
RHOD
CDH18
NBPF12
SNX10
DOT1L
TNS1
UBL4A
SLC10A3
ENTPD8
AP1B1
STMN3
RTEL1
SHCBP1L
PAX9
TDRD9
SERPINA6
NRP1
PTH1R
ROBO3
IL17RB
CHDH
PLXNB1
JPH2
BATF
MTRNR2L1
DCLK1
DLC1
SBSPON
CBWD2
KLF10
SDC1
KLRF2
PSCA
NEFH
RCAN1
HSFX4
NPIPB9
ZFP36L1
RGL3
WNT16
OBSL1
INHA
ESRP2
SLC37A3
DNMBP
EHD1
EPPK1
TCF21
HSPB8
BCL3
CDC42EP1
PPP2R5E
WNT4
NUDT9
SLC25A19
HOMER2
ITPRIPL1
MLPH
ADAMTS16
CLCN4
ADD3
TAX1BP1
PKM
SCD
CYB561
FNIP2
PTMA
DNMT3A
TSEN54
CASKIN2
PRSS22
MED12L
USF2
MEF2A
CALML5
SLC29A1
TOB1
ZBTB46
FBXW8
PTPRN2
ELOVL2
SLC16A3
RAB31
ELFN2
MIDN
SH3BGR
LCA5L
CDH1
ERN1
ZNF746
MT2A
RNF170
HOOK3
PRSS8
SLC11A2
PKIB
LHX4
UPK3A
ZBTB7A
ANXA2
UBE2I
RAI14
MOCS1
SBSN
GAPDHS
SYNGR1
TKTL2
ZNF823
CAPN13
ZNF710
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CSK
TLE3
PALLD
PABPC1
SEMA3B
ATXN1
RBM43
PADI3
TJP3
GHRH
NR0B2
ZNF436
TNK2
DDIT4
GPD1L
LENG1
ZNF385B
BASP1
SEC14L5
RPS28
NDUFA7
PTP4A2
SH3YL1
ACP1
PKD2L2
BHLHE40
CCNO
CALHM4
DDX10
SASH3
SEC14L2
PPFIBP2
PDHX
APIP
INAVA
ZNF703
TUBA3E
ABCD3
MTUS1
HP1BP3
FRAT2
CCDC170
VIT
RP1
ARRB1
KIFBP
S100A10
DGLUCY
TMEM220
SEMA3F
MTRNR2L6
TANC2
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
COL23A1
SP2
RGPD2
RGPD1
ZBTB45
SPAAR
WDR74
CRYAA2
CRYAA
POLR3F
DZANK1
TST
MPST
EPN1
GTPBP6
MTRNR2L10
EMILIN2
MAMDC2
USP17L20
DNM2
MTRNR2L9
ARHGEF16
USP17L22
CCDC200
LEMD2
RFX1
CNOT3
NLK
PI4KB
HNRNPL
OSBP
LTBP1
DMPK
RNPEPL1
ANKMY1
C3
FOXN1
EXT2
EVI5L
NAIP
NR2F6
FABP3
DLG4
ACADVL
OAZ3
MRPL9
NTMT1
FADD
ZMYND11
KRT13
TOM1L2
FOXO6
DRC3
OXT
C9orf50
MTA1
CIC
PDLIM2
GATAD2A
MAPKAPK5
USP17L11
PMEPA1
ZNF687
VWA1
PLCD3
ACBD4
PABPN1
USP17L18
ASPG
USP17L21
USP17L12
TRPM7
ZBTB7B
SLC37A1
RABL6
C9orf139
ABCA2
ARHGEF10L
OPRL1
LKAAEAR1
FARSB
PCIF1
FBH1
ANKRD16
CRK
ZNFX1
POLDIP3
KAZN
TMEM107
SIRT4
AMOTL2
CDH11
USP17L15
STC2
SETD2
LGR6
RASEF
H3C15
H3C14
H2AC19
H2AC18
SH3GLB2
EXOSC5
BCKDHA
FUS
SLC19A1
GLRX5
RBBP5
SPATA9
RHOBTB3
PDCD6IP
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
NPIPB6
H4C15
H4C14
PAX4
FECH
MICAL3
KHSRP
NFE2L1
UNC5B
S100P
H4C12
H4C11
SLC25A25
H2BC5
H1-4
RPS29
GJD3
SH2D3C
TTC21B
GPR153
ANAPC7
SRSF7
TM7SF2
C1orf198
HOGA1
ANGEL1
KRT36
MEIS1
UFM1
HSP90AB1
MAB21L4
ITGB3
KLRC3
TRAF7
LAMB2
B2M
TMEM120A
DYSF
ENKUR
AZGP1
ATP5MG
GOSR2
C19orf48
SART3
ISCU
PNO1
MRPS7
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ZBTB5
SMAD3
ACBD6
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
IMPA2
FBN1
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
ADCY9
PMF1-BGLAP
PMF1
IRF2BPL
EEF1A1
MYH11
TSN
UBE2L3
TRIM2
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
AHCYL1
TOMM40
AKT1
ZFP37
PHF13
ZNF91
GAA
H4C3
H1-6
SEMA4G
ID1
DLL3
CASZ1
ZNF654
FAM187A
EFTUD2
CGGBP1
CCDC103
RPS27
RAB13
EIF3E
BLCAP
PCTP
SULT1A1
KCTD1
RABL2B
GADD45B
IVD
PPP2R3A
CGN
SKP1
SP1
SLC25A6
C20orf204
UPF2
STAM
APPL2
BCKDK
SLC27A2
LARP1
CACTIN
SLC7A2
SUN5
BPIFB2
TRAF2
TANGO6
FBXO34
PROP1
MRPS18B
H2AX
SRSF2
MFSD11
MBD6
DDIT3
ZBTB4
SLC35G6
POLR2A
C4orf19
HSPA9
H2BC21
H2AC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
SOCS3
RUNDC3B
H2BC12
H2AC12
NME6
WDR97
MAF1
PHACTR2
CCDC187
EIF1
NCOA7
SHANK1
CLEC11A
RPLP1
PUM2
RAD23A
SCAMP4
ADAT3
PROSER1
NHLRC3
NUP214
AHCY
FAM78B
ARRDC2
PLGRKT
JUND
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
CLPSL1
SRD5A1
RPL27
PTPRH
H1-7
RAB11B
SESN1
RPS20
AP3M1
ADK
RABL2A
COL6A5
TBC1D10B
MYLPF
LOXL4
P2RX2
SLC2A11
MACIR
CALM2
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
ADAMTS8
SLC35B1
GEMIN4
RPLP0
NR2C1
MACROH2A1
NFKBIL1
EMP2
DDX39B
ATP6V1G2
H2BC11
H2AC11
MAT2A
ACE
COL18A1
RPS2
RORC
RNF151
CEBPD
BCAR3
ZC3H10
RPL41
LRIG2
LETM1
REXO1
CYP3A43
DCAF7
OR2T1
NME1-NME2
NME1
TMEM17
JUN
HADHB
HADHA
P2RX7
TMEM238
RPL28
ASGR2
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
EEF2
BCAT1
ERG
JAKMIP1
IQGAP2
EOMES
DDB2
STAM2
PHF3
TRIP10
GPR108
TTC8
SLC46A3
LUC7L2
FMC1-LUC7L2
FMC1
POFUT1
PLAGL2
CSRNP1
NGB
JUNB
SIMC1
GSTA4
TIAF1
METTL16
CCR7
KLHL14
USP17L19
TCF7L2
RPS6
FILIP1L
WIZ
HEXIM1
H2BC8
H2AC8
STIP1
ID2
CHMP5
BAG1
TSPOAP1
PCGF2
TRIM45
OXCT2
LPIN1
LASP1
MVB12B
DENND1B
ZC2HC1C
TMEM60
PHTF2
OPRD1
BRD2
ACYP1
POLR3E
PIK3CD
NAT10
RNF149
RCC1
PRKACA
PMAIP1
NBPF15
ZCWPW1
TRIM16L
MEPCE
MS4A6E
GPAM
MIPOL1
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
USP53
TJP1
GPR137
TOR1AIP2
SMC2
DTNB
RBM17
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
PLEC
PLAGL1
SH2D4B
IER3
FLOT1
EIF4A1
CIRBP
STRIP1
MAGOH
H4C2
H3C2
ATXN7
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
COX5A
APTX
TMEM79
SMG5
RPL38
JAK1
ADPGK