ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932069 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◣ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
CASP7
FKBP4
PDZK1
MYOG
RARA
FREM2
ADAMTSL5
SGK3
KCNK6
RNF223
VASN
TPD52L1
PARD6B
OVOL2
LMAN1L
RPS6KL1
TFF1
CAP2
CYP1B1
C1QTNF1
SFXN2
ARL3
DGKZ
TIPARP
RAPGEFL1
N4BP3
CCDC88C
MANEAL
CHPT1
TH
SYT12
CTAG2
HAAO
SLC25A24
MCF2L
CTBP1
NBPF1
TMEM229B
PLEKHH1
KDM4B
AMZ1
C19orf33
ESR1
SNX24
PTPA
CRAT
C1QTNF6
STK11
HAPLN2
NAB2
B3GNT6
USP31
MAP3K14
ZNF185
MYB
APOA1
LY6E
MSMB
SPOP
LRRFIP2
VPS26C
ITPK1
AKAP1
CLIC3
TFAP2C
LAMC1
CELSR2
SLC25A45
NFKBIA
RGS10
CRKL
DOK7
PDGFA
FOXK1
FBP1
UMODL1
CXXC5
PDE4DIP
EDF1
CCN5
ACACB
SLC25A42
UGT2B15
FRG2C
SLC25A47
FST
CABLES2
CCR6
SLC25A36
SPATS2L
SPTBN4
BLVRB
C1orf162
VWA2
SCOC
OLFML3
GPRIN1
UPF1
CUEDC1
MIDEAS
NRP1
MAD1L1
IPPK
AGR3
ARMCX6
MICOS10-NBL1
MICOS10
DHX37
BRI3BP
TMEM92
ABCC11
GRIK3
ABAT
PLIN5
LRG1
ARHGEF18
FMN1
DECR1
TTC39A
TBX2
DMRT2
SEPTIN9
LYPD6B
SERPINA1
AFF1
KRT85
ADAM8
KIF21A
KAT6B
RAB40C
CHSY1
VCAN
UBALD1
FOXK2
KEAP1
TRH
LRP5L
ATP6AP2
ZBTB37
COLEC12
TUBA1A
ZFP36
PLEKHG2
SLC22A5
SBNO2
FAM102A
PAK4
EHF
MAT1A
PDE4C
NPEPPS
RERG
KIAA0319
DUX4
CST6
TIFA
LIMS1
LRRC56
HRAS
YPEL2
IKBKG
SYNE3
UHRF1
UNKL
LONRF2
NXNL2
SCGB3A1
CBWD5
CBWD3
CBWD6
PKP3
HDAC11
TTC6
FOXA1
TMED8
SAMD15
GPC6
ELF1
SLC26A1
IDUA
FRG2
LATS1
TCIRG1
PSD4
FUT4
CFAP206
CCNP
PTGES
SVEP1
ANKRD2
PPP2R2C
TLE1
MACC1
TFAP2A
LRRC58
TTC39C
GFAP
PCYT1A
TSKU
PRDX1
MYZAP
GCOM1
IL20
SNAI1
TBKBP1
RCOR3
GZF1
IL24
CDK3
BMP7
MTRNR2L1
EIF5AL1
FAM214A
DNPEP
MGAT3
ACSS1
ADGRG1
IL2RB
PXDC1
WDR74
EFHD2
ABCB8
TPD52L2
ABHD16B
EDN1
FSIP1
VEPH1
ADARB1
GPSM1
DSN1
TUBA3E
CLASP2
CBWD2
CYP4F2
IER5L
FADD
PERP
DHRS3
RALGPS2
TUBA3D
RPS6KA2
ADORA1
NPIPB9
SVIL
HSPA4
ASB2
NT5DC3
TP53I3
LIMS4
LIMS3
SYT8
TMEM212
ELOVL2
SLC9A3R2
TJAP1
MARCHF10
COX7A2L
ANXA9
NDRG1
INS
SLC1A5
MFSD10
CBFA2T3
GRAMD1A
RGL3
CDH18
TMEM95
KCTD11
SHCBP1L
ACIN1
WNT16
SERPINA6
RECQL4
LRRC14
SEMA3B
IRF2BPL
NIPSNAP2
CLDN2
RHOBTB1
REM2
RNF144A
ASPG
PNKD
CALML5
KLRF2
SGCA
SHANK2
HSFX3
EOLA1
HSPB8
PTH1R
RNF170
HOOK3
HSPB1
ELFN2
NR2F6
OBSL1
INHA
PRSS22
ZBTB46
NR2F2
NAIP
CALHM4
MRGPRG
NEFH
ROBO3
LOC102723996
ICOSLG
PGLYRP2
DLC1
ANXA2
TRPM7
UBL4A
SLC10A3
B4GALT1
SCARB1
LFNG
SULT2B1
FOXN1
SHANK1
CLEC11A
GRM4
SLC37A3
DDX10
TNS1
CCDC187
FAM234B
SPRY4
SMAD3
RPEL1
STMN3
RTEL1
B3GALNT1
RCAN1
ERN1
DMPK
TDRD9
PALLD
FGFBP2
G6PD
MAGI3
JPH2
APOC3
STC2
TKTL2
TCF21
ZFYVE28
CFAP99
PHF13
CDC34
ITGB2
TPBG
SETD2
ZSWIM6
TAX1BP1
HK1
EXT2
ZBTB7A
EHD1
ENTPD8
KRT13
INAVA
TXNRD1
ME3
PLXNB1
SASH3
FBXO34
HOMER2
PPP2R5E
BATF
BCL3
ZNF346
JUND
ZNF552
PADI3
AP1B1
HUWE1
SLC7A2
ARID5B
FNIP2
UBE2H
BAMBI
RGS3
DHRS2
ABCD3
PTP4A2
CYP3A43
TSEN54
CASKIN2
NBPF12
ENKUR
VWA1
HOGA1
TMEM210
LRRC26
C4orf19
PRSS27
PAX9
CASTOR1
AKNA
TST
MPST
ZNF710
SLC19A2
CLCN4
ARFGEF2
ABCA3
RP1
B3GNT3
CYP4F11
ZNF385B
HSFX4
DNMT3A
LENG1
ADAMTS8
NCOA4
AZGP1
PLCD3
ACBD4
SPATA9
RHOBTB3
SLC11A2
MIDN
PUM2
SNX10
PTMA
BHLHE40
USP17L20
USP17L22
FRMD5
ADD3
SLC6A6
USF2
TSPAN5
ATXN1
LARP1
ELAPOR1
C1orf194
HES1
PROP1
MS4A6E
PRDM4
PLGRKT
TMEM104
NAT9
DOT1L
TJP3
SIRT4
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
RPS28
NDUFA7
COL23A1
SP2
SLC25A19
PRUNE1
MINDY1
RGPD2
RGPD1
ZBTB45
SPAAR
CRYAA2
CRYAA
POLR3F
DZANK1
C20orf203
EPN1
GTPBP6
MTRNR2L10
EMILIN2
CDC42EP1
MAMDC2
DNM2
MTRNR2L9
ARHGEF16
MYLK2
CCDC200
LEMD2
FBXW8
CDR2L
RFX1
SLC45A4
CNOT3
NLK
PI4KB
AMBP
HNRNPL
OSBP
LTBP1
RNPEPL1
ANKMY1
C3
RHOD
MTRNR2L6
TBXA2R
EVI5L
SLC29A1
SDC1
PABPC1
FABP3
DLG4
ACADVL
OAZ3
MRPL9
NTMT1
ZMYND11
TOM1L2
FOXO6
DRC3
OXT
C9orf50
MTA1
ITPRIPL1
CIC
ZNF746
PDLIM2
GATAD2A
MAPKAPK5
SSTR2
USP17L11
PMEPA1
RBM43
ZNF687
TWF2
MEF2A
PABPN1
USP17L18
USP17L21
USP17L12
JARID2
ZBTB7B
SLC37A1
RABL6
C9orf139
ABCA2
ARHGEF10L
OPRL1
LKAAEAR1
FARSB
PCIF1
FBH1
ANKRD16
CRK
ZNFX1
POLDIP3
KAZN
ARHGAP29
TMEM107
AMOTL2
CDH11
USP17L15
LGR6
PAQR5
RASEF
H3C15
H3C14
H2AC19
H2AC18
SH3GLB2
EXOSC5
BCKDHA
MTUS1
FUS
EPPK1
UBE2I
RAI14
SLC19A1
GLRX5
RBBP5
PDCD6IP
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
NPIPB6
H4C15
H4C14
PAX4
KLF10
DNMBP
SH3YL1
ACP1
FECH
MICAL3
KHSRP
NFE2L1
UNC5B
S100P
H4C12
H4C11
SLC25A25
H2BC5
H1-4
RPS29
GJD3
PKIB
SH2D3C
TTC21B
GPR153
ANAPC7
SRSF7
CYB561
ESRP2
SLC16A3
TM7SF2
LHX4
C1orf198
ANGEL1
KRT36
MEIS1
UFM1
HSP90AB1
CACNA1H
MAB21L4
ITGB3
KLRC3
TNK2
TRAF7
MED12L
LAMB2
GPD1L
B2M
TMEM120A
DYSF
MOCS1
SEC14L5
ADAMTS16
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ZBTB5
ACBD6
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
IMPA2
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
ADCY9
PMF1-BGLAP
PMF1
EEF1A1
MYH11
TSN
RAB31
UBE2L3
TRIM2
KCNK7
PSMD12
PCNX3
MAP3K11
AHCYL1
TOMM40
AKT1
ZFP37
PRSS8
ZNF91
GAA
PKM
H4C3
H1-6
DDIT4
SBSPON
SEMA4G
ID1
DLL3
DCLK1
CASZ1
ZNF654
FAM187A
EFTUD2
CGGBP1
CCDC103
RPS27
RAB13
EIF3E
BLCAP
PCTP
SULT1A1
KCTD1
RABL2B
GHRH
GADD45B
IVD
PPP2R3A
KRT24
CGN
SKP1
SP1
SLC25A6
C20orf204
IL17RB
CHDH
UPF2
STAM
APPL2
BCKDK
SLC27A2
NR0B2
CACTIN
TLE3
SUN5
BPIFB2
TRAF2
TANGO6
MRPS18B
H2AX
SRSF2
MFSD11
TOB1
ZNF823
MBD6
DDIT3
SCD
ZBTB4
SLC35G6
POLR2A
HSPA9
H2BC21
H2AC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
SOCS3
RUNDC3B
H2BC12
H2AC12
NME6
WDR97
MAF1
PHACTR2
PKD2L2
EIF1
NCOA7
RPLP1
RAD23A
HP1BP3
SCAMP4
ADAT3
PROSER1
NHLRC3
NUP214
AHCY
ARRB1
WNT4
PDHX
APIP
FAM78B
ARRDC2
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
CLPSL1
SRD5A1
RPL27
PTPRH
H1-7
RAB11B
SEC14L2
SESN1
RPS20
AP3M1
ADK
RABL2A
COL6A5
TBC1D10B
MYLPF
LOXL4
MT2A
P2RX2
SLC2A11
MACIR
CALM2
SBSN
GAPDHS
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
SLC35B1
GEMIN4
BASP1
RPLP0
NR2C1
MACROH2A1
NFKBIL1
EMP2
DDX39B
ATP6V1G2
OVOL1
H2BC11
H2AC11
MAT2A
CDH1
ACE
SEMA3F
COL18A1
RPS2
RORC
RNF151
CEBPD
BCAR3
ZC3H10
RPL41
LRIG2
LETM1
REXO1
VIT
DCAF7
OR2T1
NME1-NME2
NME1
TMEM17
JUN
HADHB
HADHA
P2RX7
TMEM238
RPL28
ASGR2
UPK3A
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
PTPRN2
EEF2
BCAT1
NUDT9
ERG
JAKMIP1
IQGAP2
EOMES
DDB2
STAM2
PHF3
TRIP10
SYNGR1
GPR108
TTC8
SLC46A3
LUC7L2
FMC1-LUC7L2
FMC1
POFUT1
PLAGL2
CSRNP1
NGB
JUNB
SIMC1
GSTA4
TIAF1
S100A10
METTL16
CCR7
KLHL14
USP17L19
TCF7L2
RPS6
FILIP1L
WIZ
HEXIM1
CCNO
H2BC8
H2AC8
STIP1
MLPH
ID2
CHMP5
BAG1
TSPOAP1
PCGF2
TRIM45
OXCT2
LPIN1
LASP1
MVB12B
DENND1B
ZC2HC1C
TMEM60
PHTF2
OPRD1
BRD2
ACYP1
POLR3E
PIK3CD
NAT10
RNF149
RCC1
PRKACA
PMAIP1
NBPF15
ZCWPW1
TRIM16L
MEPCE
GPAM
MIPOL1
CAPN13
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
USP53
TJP1
GPR137
TOR1AIP2
SMC2
DTNB
RBM17
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
PLEC
PLAGL1
SH2D4B
IER3
FLOT1
EIF4A1
CIRBP
STRIP1
PPFIBP2
MAGOH
H4C2
H3C2
ATXN7
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
FRAT2
COX5A
APTX
TMEM79
SMG5
RPL38
JAK1
ADPGK
RANBP2
CCNL1
BRAF
GNA12