ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932073 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◣ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
RARA
PDZK1
FKBP4
CASP7
VASN
MYOG
DGKZ
ADAMTSL5
RAPGEFL1
KCNK6
RPS6KL1
LMAN1L
RNF223
FREM2
SYT12
N4BP3
PARD6B
NFKBIA
TH
FOXK1
SNX24
TPD52L1
MAP3K14
OVOL2
C1QTNF1
CYP1B1
HAAO
TIPARP
FAM102A
SFXN2
ARL3
AKAP1
AMZ1
CCDC88C
SGK3
CXXC5
TFF1
CHPT1
C19orf33
EDF1
NAB2
PDGFA
CTBP1
ITPK1
LY6E
CAP2
HAPLN2
RAB40C
MANEAL
NBPF1
MCF2L
GPRIN1
C1QTNF6
MIDEAS
CTAG2
SLC25A24
LRRFIP2
FRG2C
USP31
KDM4B
APOA1
OLFML3
PTPA
CRAT
PAK4
STK11
TTC39A
MSMB
ZNF185
KEAP1
CST6
MYB
UNKL
TMEM229B
PLEKHH1
LRRC56
HRAS
B3GNT6
SEPTIN9
SLC25A45
AFF1
GRM4
LYPD6B
PLIN5
LRG1
RECQL4
LRRC14
ADAM8
CUEDC1
SCOC
KIF21A
RPS28
NDUFA7
CCN5
CABLES2
UPF1
DOK7
UHRF1
KRT85
TJAP1
ADGRG1
TIFA
CRKL
KIAA0319
SLC9A3R2
PKP3
IPPK
LAMC1
ZFP36
PLEKHG2
SLC25A36
CHSY1
SPTBN4
BLVRB
CELSR2
ESR1
B4GALT1
CDK3
ARMCX6
FBP1
ELF1
TPD52L2
ABHD16B
CLIC3
ANXA9
ZBTB37
ACIN1
TMEM92
SGCA
CLASP2
CASTOR1
VPS26C
SNAI1
PSD4
ELAPOR1
C1orf194
SLC25A42
TBX2
MICOS10-NBL1
MICOS10
DMRT2
ABAT
ACSS1
RGL3
VWA2
LRP5L
DUX4
RGS10
TTC6
FOXA1
ASB2
PLXNB1
LATS1
FMN1
PDE4DIP
ARHGEF18
FOXK2
TCIRG1
CCR6
MRGPRG
MACC1
SLC25A19
GRIK3
MGAT3
MFSD10
EDN1
SBNO2
HSPB8
NIPSNAP2
PDE4C
SULT2B1
CDC34
FRG2
C20orf203
MAD1L1
SPOP
SLC26A1
IDUA
IL2RB
ANKRD2
TST
MPST
FST
DSN1
ZBTB45
HDAC11
AKNA
TFAP2C
SYNE3
ABCC11
ZBTB46
PNKD
FUT4
FABP3
TRH
ARHGEF16
SPATS2L
PRUNE1
MINDY1
CDC42EP1
PRDX1
TUBA3E
SCARB1
TSEN54
CASKIN2
USF2
DNPEP
CBWD2
RERG
FOXO6
TSKU
ARID5B
EFHD2
CCNP
B3GALNT1
CBWD5
CBWD3
CBWD6
SVIL
TP53I3
PRSS27
CDR2L
RCOR3
NEFH
DOT1L
PERP
SYT8
RHOD
ZNF346
RNPEPL1
ANKMY1
ATP6AP2
MYLK2
MTA1
SERPINA6
PDLIM2
ZNF710
KAT6B
NT5DC3
SERPINA1
ZBTB7A
UMODL1
BMP7
CBFA2T3
IL24
FBXW8
FAM214A
ZFYVE28
CFAP99
ZBTB7B
NPIPB9
GPSM1
TUBA3D
PXDC1
DNMT3A
UGT2B15
ROBO3
LFNG
DHRS3
IVD
SLC25A47
REM2
SLC37A1
NR2F6
TBKBP1
EHF
TNS1
DECR1
TAX1BP1
SLC1A5
VEPH1
LAMB2
MTRNR2L1
C1orf162
DLG4
ACADVL
CYP4F11
LTBP1
NPEPPS
PTH1R
FECH
GFAP
DDX10
SH2D3C
OXT
HSPB1
AP1B1
INS
C9orf139
ABCA2
STMN3
RTEL1
CLCN4
PI4KB
VCAN
PTGES
DHX37
BRI3BP
SLC22A5
GPC6
ITPRIPL1
NPIPB6
NDRG1
TMEM210
LRRC26
NFE2L1
PLCD3
ACBD4
SEMA3B
SPRY4
SLC45A4
NTMT1
C9orf50
NR2F2
TTC39C
DMPK
SH3GLB2
MYZAP
GCOM1
SVEP1
OBSL1
INHA
ITGB2
ARHGEF10L
ZMYND11
ATXN1
PCTP
TMEM95
KCTD11
AMOTL2
SLC37A3
TDRD9
COLEC12
NLRP6
UBALD1
SCGB3A1
FOXN1
B3GNT3
ZNF746
IKBKG
G6PD
RNF144A
SLC29A1
CGN
BCL3
TNK2
AMBP
TUBA1A
PTPRH
TJP3
RCAN1
JARID2
ZBTB5
SLC25A6
SCAMP4
ADAT3
ABCB8
SNX10
STC2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SDC1
HK1
TWF2
PDCD6IP
HSPA4
CYP4F2
MAGI3
EIF5AL1
RASEF
OGG1
LRRC58
RAI14
PRSS8
MTUS1
TMED8
SAMD15
CALML5
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
LENG1
RORC
ELFN2
VWA1
NXNL2
PGLYRP2
PPP2R2C
CYP1A1
ZCWPW1
MEPCE
PPP1R35
PABPC1
YPEL2
ERN1
SLC16A3
TXNRD1
EMP2
WNT16
COX7A2L
RNF170
HOOK3
TBXA2R
ABCD3
PADI3
GRAMD1A
CFAP206
OAZ3
MRPL9
P2RX2
FNIP2
KLHL14
GLRX5
CYB561
COL18A1
AHCYL1
PMEPA1
SHCBP1
LASP1
EXT2
AMT
AGR3
TRPM7
ESRP2
TRIM16L
FSIP1
SLC6A6
MEF2A
BHLHE40
CLPSL1
SEMA4G
TFAP2A
CIB2
NAIP
SETD2
LCN8
LCN15
HSFX3
EOLA1
UBL4A
SLC10A3
SHANK2
ZC2HC1C
ACYP1
PCYT1A
IMPA2
TMEM120A
AHCY
USP17L20
USP17L22
UBE2H
GPR153
FAM234B
EPPK1
GAA
SLC19A1
MAB21L4
MACROH2A1
ASPG
S100P
CSK
RPS6KA2
CLDN2
DLC1
KLRC3
RGS3
SH3YL1
ACP1
ACACB
KRT13
MOCS1
RAB24
PRELID1
FRMD5
GUCA2A
SEMA3F
POU2F3
PATJ
USP17L11
USP17L18
USP17L21
USP17L12
COX5A
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
COL23A1
SP2
TLE1
LIMS1
NRP1
MAT1A
RGPD2
RGPD1
ADARB1
SPAAR
LONRF2
WDR74
CRYAA2
CRYAA
GZF1
POLR3F
DZANK1
EPN1
GTPBP6
MTRNR2L10
EMILIN2
MAMDC2
ADORA1
IER5L
DNM2
MTRNR2L9
LIMS4
LIMS3
TMEM212
IL20
CCDC200
LEMD2
RFX1
LOC102723996
ICOSLG
DHRS2
CNOT3
CDH18
NLK
FGFBP2
HNRNPL
BAMBI
OSBP
JPH2
ELOVL2
C3
MTRNR2L6
MARCHF10
RHOBTB1
EVI5L
APOC3
RALGPS2
CALHM4
ME3
FADD
TOM1L2
DRC3
PRSS22
HOMER2
PRDM4
ARFGEF2
ANXA2
KLRF2
EHD1
CIC
GATAD2A
MAPKAPK5
SSTR2
RBM43
ZNF687
ZNF552
PPP2R5E
PABPN1
TSPAN5
SHCBP1L
RABL6
OPRL1
LKAAEAR1
NBPF12
FARSB
PCIF1
PAX9
FBH1
ANKRD16
TPBG
CRK
ZNFX1
POLDIP3
KAZN
ZSWIM6
ARHGAP29
TMEM107
ZNF385B
PTP4A2
SIRT4
CDH11
PTMA
ENTPD8
USP17L15
LGR6
PALLD
PAQR5
ABCA3
HUWE1
H3C15
H3C14
H2AC19
H2AC18
EXOSC5
BCKDHA
FUS
UBE2I
RBBP5
SPATA9
RHOBTB3
NUP85
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
MIDN
H4C15
H4C14
PAX4
KLF10
DNMBP
MICAL3
KHSRP
UNC5B
H4C12
H4C11
SLC25A25
H2BC5
H1-4
BATF
RPS29
GJD3
PKIB
ADD3
TTC21B
ANAPC7
SRSF7
TM7SF2
LHX4
C1orf198
HOGA1
ANGEL1
KRT36
MEIS1
UFM1
TCF21
HSP90AB1
CACNA1H
INAVA
ITGB3
TRAF7
SASH3
MED12L
GPD1L
B2M
DYSF
HSFX4
ENKUR
SEC14L5
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
SART3
ISCU
PNO1
MRPS7
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SMAD3
ACBD6
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
FBN1
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
ADCY9
PMF1-BGLAP
PMF1
IRF2BPL
EEF1A1
MYH11
TSN
RAB31
UBE2L3
TRIM2
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
TOMM40
AKT1
ZFP37
PHF13
ZNF91
PKM
H4C3
H1-6
DDIT4
SBSPON
ID1
DLL3
DCLK1
CASZ1
ZNF654
FAM187A
EFTUD2
CGGBP1
CCDC103
RPS27
RAB13
EIF3E
BLCAP
SULT1A1
KCTD1
SLC11A2
RABL2B
GHRH
GADD45B
PPP2R3A
KRT24
SKP1
RP1
SP1
C20orf204
IL17RB
CHDH
UPF2
STAM
APPL2
BCKDK
SLC27A2
NR0B2
LARP1
CACTIN
SLC7A2
TLE3
SUN5
BPIFB2
TRAF2
TANGO6
FBXO34
PROP1
MRPS18B
H2AX
SRSF2
MFSD11
TOB1
ZNF823
MBD6
DDIT3
SCD
ZBTB4
SLC35G6
POLR2A
C4orf19
HSPA9
H2BC21
H2AC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
SOCS3
RUNDC3B
H2BC12
H2AC12
NME6
WDR97
MAF1
PHACTR2
CCDC187
PKD2L2
EIF1
NCOA7
SHANK1
CLEC11A
RPLP1
PUM2
RAD23A
HP1BP3
PROSER1
NHLRC3
NUP214
ARRB1
WNT4
PDHX
APIP
FAM78B
ARRDC2
PLGRKT
JUND
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
SRD5A1
RPL27
H1-7
RAB11B
SEC14L2
SESN1
RPS20
AP3M1
ADK
RABL2A
COL6A5
TBC1D10B
MYLPF
LOXL4
MT2A
SLC2A11
MACIR
CALM2
SBSN
GAPDHS
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
ADAMTS8
SLC35B1
GEMIN4
BASP1
RPLP0
NR2C1
NFKBIL1
DDX39B
ATP6V1G2
OVOL1
H2BC11
H2AC11
MAT2A
CDH1
ACE
RPS2
RNF151
CEBPD
BCAR3
ZC3H10
RPL41
LRIG2
LETM1
REXO1
CYP3A43
VIT
DCAF7
OR2T1
NME1-NME2
NME1
TMEM17
JUN
HADHB
HADHA
P2RX7
TMEM238
RPL28
ASGR2
UPK3A
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
PTPRN2
EEF2
BCAT1
NUDT9
ERG
JAKMIP1
IQGAP2
EOMES
DDB2
STAM2
PHF3
TRIP10
SYNGR1
GPR108
TTC8
SLC46A3
LUC7L2
FMC1-LUC7L2
FMC1
POFUT1
PLAGL2
CSRNP1
NGB
JUNB
SIMC1
GSTA4
TIAF1
S100A10
METTL16
CCR7
USP17L19
TCF7L2
RPS6
FILIP1L
WIZ
HEXIM1
CCNO
H2BC8
H2AC8
STIP1
MLPH
ID2
CHMP5
BAG1
TSPOAP1
PCGF2
TRIM45
OXCT2
LPIN1
MVB12B
DENND1B
TMEM60
PHTF2
OPRD1
BRD2
POLR3E
PIK3CD
NAT10
RNF149
RCC1
PRKACA
PMAIP1
NBPF15
MS4A6E
GPAM
MIPOL1
CAPN13
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
USP53
TJP1
GPR137
TOR1AIP2
SMC2
DTNB
RBM17
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
PLEC
PLAGL1
SH2D4B
IER3
FLOT1
EIF4A1
CIRBP
STRIP1
PPFIBP2
MAGOH
H4C2
H3C2
ATXN7
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
FRAT2
APTX
TMEM79