ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932077 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◣ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
CASP7
RARA
FKBP4
ADAMTSL5
PDZK1
MYOG
KCNK6
RPS6KL1
RAPGEFL1
VASN
N4BP3
RNF223
FREM2
PARD6B
C1QTNF1
LMAN1L
FOXK1
TH
CTBP1
SNX24
DGKZ
SYT12
MCF2L
SFXN2
ARL3
EDF1
TPD52L1
CCDC88C
MAP3K14
HAAO
C19orf33
OVOL2
SLC25A24
MANEAL
NAB2
SGK3
AKAP1
TFF1
TIPARP
CYP1B1
KDM4B
ZNF185
NFKBIA
CAP2
AMZ1
B3GNT6
CHPT1
LY6E
CLIC3
CTAG2
STK11
LYPD6B
USP31
PTPA
CRAT
FAM102A
CABLES2
C1QTNF6
LRRFIP2
PKP3
NBPF1
LRRC56
HRAS
ITPK1
GPRIN1
HAPLN2
PDGFA
OLFML3
CST6
CXXC5
TMEM229B
PLEKHH1
SPTBN4
BLVRB
APOA1
CRKL
MSMB
AFF1
TTC39A
UPF1
CHSY1
FRG2C
DOK7
PAK4
MYB
LAMC1
SLC25A45
UNKL
CLASP2
CELSR2
SNAI1
VPS26C
KRT85
KEAP1
ESR1
SLC25A36
IPPK
RAB40C
TIFA
MIDEAS
FST
B4GALT1
CCN5
RPS28
NDUFA7
UMODL1
ACSS1
RECQL4
LRRC14
SCOC
ADGRG1
PLIN5
LRG1
MFSD10
FOXK2
SLC9A3R2
SEPTIN9
KIAA0319
UHRF1
ADAM8
CUEDC1
TCIRG1
KIF21A
DUX4
ANXA9
SGCA
CDK3
ZBTB37
PDE4C
GRM4
MICOS10-NBL1
MICOS10
SLC25A19
CBFA2T3
ASB2
SPOP
ZBTB46
SEMA3B
PRDX1
SBNO2
RGS10
TBX2
FBP1
CCR6
ZBTB45
SPATS2L
MAD1L1
TTC6
FOXA1
ARHGEF18
TRH
SLC25A42
DMRT2
RGL3
B3GALNT1
ACIN1
DECR1
ZFP36
PLEKHG2
MGAT3
DSN1
ARMCX6
DNPEP
C1orf162
ABAT
CBWD5
CBWD3
ATP6AP2
AKNA
RCOR3
GPSM1
MACC1
VWA2
OAZ3
MRPL9
TJAP1
DHX37
BRI3BP
GPC6
MRGPRG
PNKD
FUT4
IL24
PDE4DIP
UGT2B15
FRG2
IL2RB
HSPB8
PSD4
TUBA3E
TFAP2C
SYNE3
VEPH1
DHRS3
LATS1
TAX1BP1
DLG4
ACADVL
TPD52L2
ABHD16B
ABCC11
NAIP
LRP5L
ANKRD2
WNT16
FMN1
SLC22A5
GRIK3
ELF1
SULT2B1
SLC26A1
IDUA
NT5DC3
TUBA3D
PPP2R2C
LTBP1
SERPINA6
REM2
NRP1
SVIL
LRRC58
PGLYRP2
NPIPB9
NXNL2
TMED8
SAMD15
TMEM92
CASTOR1
CDC34
ZFYVE28
CFAP99
RNPEPL1
ANKMY1
PRUNE1
MINDY1
TP53I3
GFAP
SLC25A47
HDAC11
ELAPOR1
C1orf194
EFHD2
NEFH
TRPM7
SERPINA1
CLCN4
DOT1L
PTGES
VCAN
LIMS1
TST
MPST
SLC29A1
EDN1
CDR2L
TM7SF2
MTRNR2L1
EIF5AL1
PDCD6IP
COLEC12
SYT8
PRSS27
CBWD6
FBXW8
USF2
PMEPA1
NTMT1
C9orf50
CDC42EP1
UBALD1
MYLK2
TSEN54
CASKIN2
OXT
ATXN1
FAM214A
STMN3
RTEL1
ROBO3
LAMB2
DMPK
PDLIM2
FABP3
ZNF346
AMOTL2
FOXN1
YPEL2
EXT2
DLC1
PLXNB1
SDC1
PXDC1
DNMT3A
ARHGEF16
ARHGEF10L
SLC25A6
NIPSNAP2
AHCY
AKT1
PERP
ERN1
FNIP2
ANXA2
GZF1
RHOD
RNF144A
RERG
SLC1A5
LOXL4
CFAP206
ELFN2
MYZAP
GCOM1
LONRF2
KAT6B
C9orf139
ABCA2
INS
FOXO6
TUBA1A
AGR3
DDX10
RCAN1
C20orf203
NDRG1
ADORA1
JUND
TMEM95
KCTD11
COX7A2L
SPATA9
RHOBTB3
SVEP1
CBWD2
KLRC3
HOGA1
MAT1A
PI4KB
KLF10
RNF170
HOOK3
KAZN
OBSL1
INHA
SCARB1
ZNF710
GLRX5
SLC37A1
CCNP
MED12L
SLC45A4
ZNF91
FGFBP2
SHANK1
CLEC11A
MTA1
SH3YL1
ACP1
CALML5
MAGI3
ZMYND11
PLCD3
ACBD4
ZBTB7B
HSPA4
AP1B1
ARID5B
ADCY9
BCL3
SH3GLB2
PTH1R
ZNF746
ZBTB5
SPRY4
USP17L20
USP17L22
SLC46A3
TIAF1
TDRD9
STC2
SEC14L5
C4orf19
TTC39C
RPS6KA2
NPIPB6
TSKU
TBXA2R
UBL4A
SLC10A3
TNS1
MTUS1
EMP2
SCGB3A1
IL20
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
APOC3
ZBTB7A
SEMA4G
HSH2D
NECAB3
NNMT
NBPF15
WDR74
LFNG
ITPRIPL1
NPEPPS
PCYT1A
BHLHE40
NR2F6
VWA1
MIPOL1
TMEM210
LRRC26
BMP7
ADARB1
MAP2K5
LILRB5
PROP1
HK1
IVD
ZC2HC1C
ACYP1
TBKBP1
TMEM120A
ORMDL3
INPP4B
NFE2L1
SNX10
ASPG
SLC19A1
UBE2H
UBE2I
GRAMD1A
SETD2
SH2D3C
GPR153
NR2F2
UBTF
KRT13
SOAT2
IGFBP6
ARHGEF28
CSK
CYP4F11
IKBKG
LIMS4
LIMS3
FRMD5
TANC2
SPATC1L
MTRNR2L2
MSH3
DHFR
EHF
MTRNR2L8
ACACB
COL23A1
SP2
TLE1
RGPD2
RGPD1
TFAP2A
G6PD
SPAAR
CYP4F2
CRYAA2
CRYAA
POLR3F
DZANK1
SHANK2
EPN1
GTPBP6
MTRNR2L10
EMILIN2
MAMDC2
IER5L
DNM2
MTRNR2L9
TMEM212
CCDC200
LEMD2
TXNRD1
FSIP1
RFX1
LOC102723996
ICOSLG
DHRS2
CNOT3
CDH18
SLC37A3
NLK
CLDN2
AMBP
HNRNPL
BAMBI
OSBP
JPH2
ELOVL2
C3
MTRNR2L6
MARCHF10
RHOBTB1
EVI5L
PABPC1
ABCB8
RGS3
RALGPS2
CALHM4
ME3
FADD
TOM1L2
DRC3
HSFX3
EOLA1
HSPB1
PRSS22
SLC6A6
HOMER2
PRDM4
ARFGEF2
KLRF2
EHD1
CIC
GATAD2A
MAPKAPK5
ITGB2
SSTR2
USP17L11
RBM43
ZNF687
ZNF552
TWF2
MEF2A
PPP2R5E
PABPN1
TSPAN5
USP17L18
SHCBP1L
FAM234B
USP17L21
USP17L12
JARID2
RABL6
OPRL1
LKAAEAR1
ABCD3
NBPF12
FARSB
PCIF1
PAX9
FBH1
ANKRD16
TPBG
CRK
ZNFX1
POLDIP3
ZSWIM6
ARHGAP29
TMEM107
ZNF385B
PTP4A2
SIRT4
CDH11
PTMA
ENTPD8
USP17L15
LGR6
PALLD
LENG1
PAQR5
B3GNT3
ABCA3
HUWE1
RASEF
H3C15
H3C14
H2AC19
H2AC18
PADI3
EXOSC5
BCKDHA
FUS
EPPK1
RAI14
RBBP5
TJP3
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
MIDN
H4C15
H4C14
PAX4
DNMBP
FECH
MICAL3
KHSRP
UNC5B
S100P
H4C12
H4C11
SLC25A25
H2BC5
H1-4
BATF
RPS29
GJD3
PKIB
ADD3
TTC21B
ANAPC7
SRSF7
CYB561
ESRP2
SLC16A3
LHX4
C1orf198
ANGEL1
KRT36
MEIS1
UFM1
TCF21
HSP90AB1
CACNA1H
INAVA
MAB21L4
ITGB3
TNK2
TRAF7
SASH3
GPD1L
B2M
DYSF
MOCS1
HSFX4
ENKUR
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SMAD3
ACBD6
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
IMPA2
FBN1
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
PMF1-BGLAP
PMF1
IRF2BPL
EEF1A1
MYH11
TSN
RAB31
UBE2L3
TRIM2
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
AHCYL1
TOMM40
ZFP37
PRSS8
PHF13
GAA
PKM
H4C3
H1-6
DDIT4
SBSPON
ID1
DLL3
DCLK1
CASZ1
ZNF654
FAM187A
EFTUD2
CGGBP1
CCDC103
RPS27
RAB13
EIF3E
BLCAP
PCTP
SULT1A1
KCTD1
SLC11A2
RABL2B
GHRH
GADD45B
PPP2R3A
KRT24
CGN
SKP1
RP1
SP1
C20orf204
IL17RB
CHDH
UPF2
STAM
APPL2
BCKDK
SLC27A2
NR0B2
LARP1
CACTIN
SLC7A2
TLE3
SUN5
BPIFB2
TRAF2
TANGO6
FBXO34
MRPS18B
H2AX
SRSF2
MFSD11
TOB1
ZNF823
MBD6
DDIT3
SCD
ZBTB4
SLC35G6
POLR2A
HSPA9
H2BC21
H2AC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
SOCS3
RUNDC3B
H2BC12
H2AC12
NME6
WDR97
MAF1
PHACTR2
CCDC187
PKD2L2
EIF1
NCOA7
RPLP1
PUM2
RAD23A
HP1BP3
SCAMP4
ADAT3
PROSER1
NHLRC3
NUP214
ARRB1
WNT4
PDHX
APIP
FAM78B
ARRDC2
PLGRKT
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
CLPSL1
SRD5A1
RPL27
PTPRH
H1-7
RAB11B
SEC14L2
SESN1
RPS20
AP3M1
ADK
RABL2A
COL6A5
TBC1D10B
MYLPF
MT2A
P2RX2
SLC2A11
MACIR
CALM2
SBSN
GAPDHS
SEC61B
ALG2
FAM3C
ASXL1
AMD1
IPO13
ADAMTS8
SLC35B1
GEMIN4
BASP1
RPLP0
NR2C1
MACROH2A1
NFKBIL1
DDX39B
ATP6V1G2
OVOL1
H2BC11
H2AC11
MAT2A
CDH1
ACE
SEMA3F
COL18A1
RPS2
RORC
RNF151
CEBPD
BCAR3
ZC3H10
RPL41
LRIG2
LETM1
REXO1
CYP3A43
VIT
DCAF7
OR2T1
NME1-NME2
NME1
TMEM17
JUN
HADHB
HADHA
P2RX7
TMEM238
RPL28
ASGR2
UPK3A
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
PTPRN2
EEF2
BCAT1
NUDT9
ERG
JAKMIP1
IQGAP2
EOMES
DDB2
STAM2
PHF3
TRIP10
SYNGR1
GPR108
TTC8
LUC7L2
FMC1-LUC7L2
FMC1
POFUT1
PLAGL2
CSRNP1
NGB
JUNB
SIMC1
GSTA4
S100A10
METTL16
CCR7
KLHL14
USP17L19
TCF7L2
RPS6
FILIP1L
WIZ
HEXIM1
CCNO
H2BC8
H2AC8
STIP1
MLPH
ID2
CHMP5
BAG1
TSPOAP1
PCGF2
TRIM45
OXCT2
LPIN1
LASP1
MVB12B
DENND1B
TMEM60
PHTF2
OPRD1
BRD2
POLR3E
PIK3CD
NAT10
RNF149
RCC1
PRKACA
PMAIP1
ZCWPW1
TRIM16L
MEPCE
MS4A6E
GPAM
CAPN13
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
USP53
TJP1
GPR137
TOR1AIP2
SMC2
DTNB
RBM17
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
PLEC
PLAGL1
SH2D4B
IER3
FLOT1
EIF4A1
CIRBP
STRIP1
PPFIBP2
MAGOH
H4C2
H3C2
ATXN7
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
FRAT2
COX5A
APTX
TMEM79
SMG5
RPL38