ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932062 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◣ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
PDZK1
PARD6B
CASP7
MYOG
RARA
FKBP4
FREM2
VASN
ADAMTSL5
TFF1
OVOL2
LMAN1L
TPD52L1
DGKZ
SGK3
KCNK6
RNF223
RPS6KL1
CHPT1
RAPGEFL1
PTPA
CRAT
CAP2
CYP1B1
C1QTNF1
SLC25A24
N4BP3
AMZ1
TH
CCDC88C
SYT12
SFXN2
ARL3
TIPARP
TMEM229B
PLEKHH1
HAAO
AKAP1
GPRIN1
NBPF1
UPF1
MYB
RGS10
KDM4B
C1QTNF6
SNX24
C19orf33
USP31
TMEM92
MSMB
DMRT2
CXXC5
APOA1
PDGFA
LAMC1
TFAP2C
MANEAL
NAB2
ESR1
ZNF185
MCF2L
ITPK1
B3GNT6
MAP3K14
FBP1
BMP7
FOXK1
CABLES2
HAPLN2
LY6E
KIF21A
CTBP1
CTAG2
EHF
UMODL1
NFKBIA
SPTBN4
BLVRB
TBX2
STK11
IPPK
SLC25A45
KEAP1
YPEL2
LYPD6B
FAM102A
SERPINA1
MIDEAS
PLIN5
LRG1
ABCC11
C1orf162
ADAM8
DOK7
CELSR2
AFF1
CCR6
UHRF1
DECR1
DNPEP
VPS26C
TIFA
FST
EDF1
DHX37
BRI3BP
SCOC
PDE4DIP
CCN5
KRT85
ABAT
CST6
ARHGEF18
TTC39A
OLFML3
MACC1
SPATS2L
LRRFIP2
PTGES
ACACB
TMED8
SAMD15
SEPTIN9
GRIK3
FRG2C
IKBKG
COLEC12
CLIC3
RERG
CUEDC1
CRKL
UNKL
ARMCX6
ACSS1
ELAPOR1
C1orf194
FMN1
ZBTB37
LRRC56
HRAS
TJAP1
VWA2
UGT2B15
SLC25A47
MAD1L1
FOXK2
DUX4
SPOP
LATS1
RAB40C
SLC25A42
NPEPPS
KIAA0319
SNAI1
LRP5L
PRDX1
NDRG1
KAT6B
PKP3
ANKRD2
EFHD2
NT5DC3
B4GALT1
MRGPRG
VEPH1
ELF1
SBNO2
SLC25A36
TUBA1A
GFAP
CBWD5
CBWD3
CBWD6
TBKBP1
ANXA9
GPSM1
TCIRG1
SGCA
MAGI3
PAK4
FUT4
JPH2
PSD4
RCOR3
SLC26A1
IDUA
SHANK2
AGR3
SVIL
SYT8
TPD52L2
ABHD16B
VCAN
ZNF346
CYP4F2
TMEM212
LRRC58
CLDN2
TLE1
ERN1
GRAMD1A
DSN1
NPIPB9
ADGRG1
BAMBI
PXDC1
MARCHF10
CHSY1
GPC6
ATP6AP2
TFAP2A
G6PD
PDE4C
CDK3
RPS28
NDUFA7
TTC6
FOXA1
HDAC11
MICOS10-NBL1
MICOS10
TRH
FAM214A
CBFA2T3
PNKD
PRUNE1
MINDY1
MFSD10
SYNE3
SLC45A4
PERP
C20orf203
RHOBTB1
SLC9A3R2
MGAT3
COX7A2L
SERPINA6
MAT1A
ZFP36
PLEKHG2
NIPSNAP2
TP53I3
NXNL2
LOC102723996
ICOSLG
TST
MPST
SLC22A5
CCNP
SULT2B1
ADORA1
TSKU
DHRS2
CYP4F11
REM2
RECQL4
LRRC14
B3GALNT1
PGLYRP2
RGL3
RPS6KA2
SVEP1
GZF1
APOC3
MTRNR2L1
DHRS3
FGFBP2
ADARB1
CBWD2
LIMS1
ZNF710
IL20
ACIN1
HK1
ELOVL2
KLRF2
CDC34
GRM4
MYZAP
GCOM1
IER5L
ME3
EDN1
AZGP1
NR2F2
RBM43
EIF5AL1
IL24
LONRF2
PPP2R5E
NRP1
FSIP1
CDH18
PAQR5
TUBA3D
KRT13
SLC37A3
PTH1R
TWF2
HUWE1
CALHM4
CASTOR1
PCYT1A
TMEM95
KCTD11
SPRY4
DNMBP
LIMS4
LIMS3
EXT2
ASPG
SLC19A1
PKIB
HOMER2
ZMYND11
IL2RB
SSTR2
PALLD
NBPF12
ARID5B
ENTPD8
CFAP206
SUN5
BPIFB2
FRG2
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
CLASP2
ASB2
COL23A1
ZBTB46
SP2
SEMA3B
PPP2R2C
SLC25A19
UBALD1
RGPD2
RGPD1
HSPB8
ZBTB45
AKNA
SPAAR
PLXNB1
PRSS27
TMEM210
LRRC26
SCGB3A1
WNT16
TUBA3E
ZFYVE28
WDR74
CFAP99
CRYAA2
CRYAA
POLR3F
DZANK1
NEFH
SCARB1
SLC1A5
EPN1
GTPBP6
MTRNR2L10
EMILIN2
CDC42EP1
MAMDC2
TTC39C
RNF144A
DNMT3A
TAX1BP1
USP17L20
DNM2
MTRNR2L9
STMN3
RTEL1
LFNG
DOT1L
INS
ARHGEF16
USP17L22
MYLK2
CCDC200
LEMD2
ROBO3
OBSL1
INHA
TXNRD1
FBXW8
CDR2L
HSPA4
RFX1
USF2
TDRD9
ELFN2
CLCN4
TSEN54
CASKIN2
AP1B1
CNOT3
NLK
DDX10
PI4KB
AMBP
HNRNPL
ATXN1
RCAN1
TNS1
RNF170
OSBP
HOOK3
LTBP1
DMPK
RNPEPL1
ANKMY1
C3
RHOD
FRMD5
FOXN1
MTRNR2L6
TBXA2R
CALML5
EVI5L
NAIP
SLC29A1
NR2F6
SDC1
PABPC1
ZBTB7A
FABP3
UBL4A
SLC10A3
ABCB8
RGS3
DLG4
ACADVL
OAZ3
MRPL9
RALGPS2
UBE2H
NTMT1
DLC1
FADD
BCL3
TOM1L2
FOXO6
DRC3
SNX10
HSFX3
EOLA1
HSPB1
OXT
C9orf50
PRSS22
SLC6A6
MTA1
PRDM4
ARFGEF2
FNIP2
ANXA2
ITPRIPL1
EHD1
CIC
ZNF746
PDLIM2
GATAD2A
MAPKAPK5
ITGB2
USP17L11
PMEPA1
ZNF687
VWA1
PLCD3
ACBD4
ZNF552
MEF2A
PABPN1
TSPAN5
USP17L18
SHCBP1L
FAM234B
USP17L21
USP17L12
JARID2
TRPM7
ZBTB7B
SLC37A1
RABL6
C9orf139
ABCA2
ARHGEF10L
OPRL1
LKAAEAR1
ABCD3
FARSB
PCIF1
PAX9
FBH1
ANKRD16
TPBG
CRK
ZNFX1
POLDIP3
KAZN
ZSWIM6
ARHGAP29
TMEM107
ZNF385B
PTP4A2
SIRT4
AMOTL2
CDH11
BHLHE40
PTMA
USP17L15
STC2
SETD2
LGR6
LENG1
B3GNT3
ABCA3
RASEF
H3C15
H3C14
H2AC19
H2AC18
SH3GLB2
PADI3
EXOSC5
BCKDHA
MTUS1
FUS
EPPK1
UBE2I
RAI14
GLRX5
RBBP5
SPATA9
RHOBTB3
PDCD6IP
TJP3
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
MIDN
NPIPB6
H4C15
H4C14
PAX4
KLF10
SH3YL1
ACP1
FECH
MICAL3
KHSRP
NFE2L1
UNC5B
S100P
H4C12
H4C11
SLC25A25
H2BC5
H1-4
BATF
RPS29
GJD3
SH2D3C
ADD3
TTC21B
GPR153
ANAPC7
SRSF7
CYB561
ESRP2
SLC16A3
TM7SF2
LHX4
C1orf198
HOGA1
ANGEL1
KRT36
MEIS1
UFM1
TCF21
HSP90AB1
CACNA1H
INAVA
MAB21L4
ITGB3
KLRC3
TNK2
TRAF7
SASH3
MED12L
LAMB2
GPD1L
B2M
TMEM120A
DYSF
MOCS1
HSFX4
ENKUR
SEC14L5
ADAMTS16
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ZBTB5
SMAD3
ACBD6
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
IMPA2
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
ADCY9
PMF1-BGLAP
PMF1
IRF2BPL
EEF1A1
MYH11
TSN
RAB31
UBE2L3
TRIM2
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
AHCYL1
TOMM40
AKT1
ZFP37
PRSS8
PHF13
ZNF91
GAA
PKM
H4C3
H1-6
DDIT4
SBSPON
SEMA4G
ID1
DLL3
DCLK1
CASZ1
ZNF654
FAM187A
EFTUD2
CGGBP1
CCDC103
RPS27
RAB13
EIF3E
BLCAP
PCTP
SULT1A1
KCTD1
SLC11A2
RABL2B
GHRH
GADD45B
IVD
PPP2R3A
KRT24
CGN
SKP1
RP1
SP1
SLC25A6
C20orf204
IL17RB
CHDH
UPF2
STAM
APPL2
BCKDK
SLC27A2
NR0B2
LARP1
CACTIN
SLC7A2
TLE3
TRAF2
TANGO6
FBXO34
PROP1
MRPS18B
H2AX
SRSF2
MFSD11
TOB1
ZNF823
MBD6
DDIT3
SCD
ZBTB4
SLC35G6
POLR2A
C4orf19
HSPA9
H2BC21
H2AC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
SOCS3
RUNDC3B
H2BC12
H2AC12
NME6
WDR97
MAF1
PHACTR2
CCDC187
PKD2L2
EIF1
NCOA7
SHANK1
CLEC11A
RPLP1
PUM2
RAD23A
HP1BP3
SCAMP4
ADAT3
PROSER1
NHLRC3
NUP214
AHCY
ARRB1
WNT4
PDHX
APIP
FAM78B
ARRDC2
PLGRKT
JUND
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
CLPSL1
SRD5A1
RPL27
PTPRH
H1-7
RAB11B
SEC14L2
SESN1
RPS20
AP3M1
ADK
RABL2A
COL6A5
TBC1D10B
MYLPF
LOXL4
MT2A
P2RX2
SLC2A11
MACIR
CALM2
SBSN
GAPDHS
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
ADAMTS8
SLC35B1
GEMIN4
BASP1
RPLP0
NR2C1
MACROH2A1
NFKBIL1
EMP2
DDX39B
ATP6V1G2
OVOL1
H2BC11
H2AC11
MAT2A
CDH1
ACE
SEMA3F
COL18A1
RPS2
RORC
RNF151
CEBPD
BCAR3
ZC3H10
RPL41
LRIG2
LETM1
REXO1
CYP3A43
VIT
DCAF7
OR2T1
NME1-NME2
NME1
TMEM17
JUN
HADHB
HADHA
P2RX7
TMEM238
RPL28
ASGR2
UPK3A
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
PTPRN2
EEF2
BCAT1
NUDT9
ERG
JAKMIP1
IQGAP2
EOMES
DDB2
STAM2
PHF3
TRIP10
SYNGR1
GPR108
TTC8
SLC46A3
LUC7L2
FMC1-LUC7L2
FMC1
POFUT1
PLAGL2
CSRNP1
NGB
JUNB
SIMC1
GSTA4
TIAF1
S100A10
METTL16
CCR7
KLHL14
USP17L19
TCF7L2
RPS6
FILIP1L
WIZ
HEXIM1
CCNO
H2BC8
H2AC8
STIP1
MLPH
ID2
CHMP5
BAG1
TSPOAP1
PCGF2
TRIM45
OXCT2
LPIN1
LASP1
MVB12B
DENND1B
ZC2HC1C
TMEM60
PHTF2
OPRD1
BRD2
ACYP1
POLR3E
PIK3CD
NAT10
RNF149
RCC1
PRKACA
PMAIP1
NBPF15
ZCWPW1
TRIM16L
MEPCE
MS4A6E
GPAM
MIPOL1
CAPN13
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
USP53
TJP1
GPR137
TOR1AIP2
SMC2
DTNB
RBM17
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
PLEC
PLAGL1
SH2D4B
IER3
FLOT1
EIF4A1
CIRBP
STRIP1
PPFIBP2
MAGOH
H4C2
H3C2
ATXN7
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
FRAT2
COX5A
APTX
TMEM79
SMG5
RPL38
JAK1
ADPGK
RANBP2
CCNL1
BRAF
GNA12
KCNB2
TTI2
TRIM55
NFE2L2
MAP1B