ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932074 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◣ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

CASP7
GREB1
RARA
PARD6B
PDZK1
MYOG
FKBP4
ADAMTSL5
RPS6KL1
N4BP3
KCNK6
VASN
MCF2L
TH
RNF223
FOXK1
RAPGEFL1
C1QTNF1
LMAN1L
SNX24
FREM2
EDF1
SYT12
CTBP1
HAAO
MANEAL
TFF1
SLC25A24
MAP3K14
DGKZ
OVOL2
TPD52L1
B3GNT6
AKAP1
CHPT1
CCDC88C
C19orf33
SGK3
NAB2
HAPLN2
C1QTNF6
SFXN2
ARL3
CYP1B1
CXXC5
PDGFA
CTAG2
TIPARP
KDM4B
MYB
LRRFIP2
CABLES2
PTPA
CRAT
GPRIN1
LAMC1
FRG2C
ZNF185
TMEM229B
PLEKHH1
STK11
AMZ1
USP31
SLC25A36
CAP2
MSMB
CLIC3
ITPK1
NBPF1
LY6E
KEAP1
KRT85
SLC9A3R2
CRKL
TTC6
FOXA1
APOA1
UPF1
NFKBIA
MTRNR2L1
FAM102A
ESR1
FRG2
SLC25A45
CELSR2
MIDEAS
SPTBN4
BLVRB
DOK7
TTC39A
RGS10
DUX4
TFAP2C
LYPD6B
AFF1
SCOC
VPS26C
OLFML3
IPPK
FBP1
CST6
TMEM92
UMODL1
CCN5
PLIN5
LRG1
RAB40C
DMRT2
TBX2
LRRC56
HRAS
KIF21A
SEPTIN9
ADAM8
UNKL
KIAA0319
SPOP
TIFA
CUEDC1
ARMCX6
SLC25A42
PKP3
PAK4
DECR1
FST
C1orf162
PDE4DIP
CHSY1
UHRF1
FMN1
VWA2
SPATC1L
ELF1
ARHGEF18
CCR6
ZBTB37
MAD1L1
ABAT
FOXK2
MTRNR2L2
MSH3
DHFR
ABCC11
SPATS2L
ACSS1
TJAP1
GRIK3
DHX37
BRI3BP
SBNO2
MICOS10-NBL1
MICOS10
EHF
SLC25A47
DNPEP
ZFP36
PLEKHG2
MACC1
MTRNR2L8
PDE4C
GRM4
SNAI1
COLEC12
RECQL4
LRRC14
CLASP2
B4GALT1
TCIRG1
UGT2B15
TRH
LRP5L
ADGRG1
PSD4
KAT6B
ANXA9
RCOR3
SERPINA1
PRDX1
LATS1
CDK3
BMP7
FUT4
TUBA1A
RPS28
NDUFA7
ACACB
SGCA
ASB2
MFSD10
CBWD5
CBWD3
TPD52L2
ABHD16B
YPEL2
RERG
AGR3
ACIN1
TMED8
SAMD15
SYNE3
HDAC11
SVIL
NPEPPS
IKBKG
COL23A1
MRGPRG
CBWD6
GPSM1
CBFA2T3
ELAPOR1
C1orf194
VCAN
SULT2B1
ANKRD2
ZBTB46
SLC26A1
IDUA
PTGES
DSN1
IL2RB
ATP6AP2
RGL3
SLC22A5
TSKU
EFHD2
SP2
SYT8
GPC6
GFAP
MGAT3
SEMA3B
VEPH1
EDN1
PPP2R2C
ZNF346
MYZAP
GCOM1
TLE1
B3GALNT1
NIPSNAP2
CCNP
DHRS3
NT5DC3
TP53I3
LIMS1
PNKD
SERPINA6
SLC25A19
FAM214A
NRP1
LRRC58
SVEP1
PRUNE1
MINDY1
IL24
CFAP206
UBALD1
TBKBP1
PERP
NXNL2
ARID5B
MAT1A
RGPD2
RGPD1
NPIPB9
HSPB8
ZBTB45
CDC34
ADARB1
PXDC1
CASTOR1
TFAP2A
AKNA
G6PD
CBWD2
TUBA3D
SPAAR
PLXNB1
PRSS27
TMEM210
LRRC26
CYP4F2
SCGB3A1
WNT16
NDRG1
MAGI3
LONRF2
REM2
TUBA3E
COX7A2L
PGLYRP2
ZFYVE28
WDR74
CFAP99
CRYAA2
CRYAA
GZF1
POLR3F
DZANK1
C20orf203
NEFH
SCARB1
EIF5AL1
TST
MPST
PCYT1A
SHANK2
SLC1A5
EPN1
GTPBP6
MTRNR2L10
EMILIN2
CDC42EP1
MAMDC2
TTC39C
ADORA1
RNF144A
DNMT3A
TAX1BP1
USP17L20
IER5L
DNM2
TMEM95
KCTD11
MTRNR2L9
STMN3
RTEL1
PTH1R
CYP4F11
LFNG
DOT1L
LIMS4
LIMS3
TMEM212
INS
ARHGEF16
HK1
NR2F2
USP17L22
MYLK2
IL20
CCDC200
LEMD2
GRAMD1A
ROBO3
OBSL1
INHA
TXNRD1
FSIP1
FBXW8
ERN1
SPRY4
CDR2L
HSPA4
RFX1
RPS6KA2
USF2
LOC102723996
ICOSLG
TDRD9
ELFN2
CLCN4
ZNF710
TSEN54
CASKIN2
SLC45A4
AP1B1
DHRS2
CNOT3
CDH18
SLC37A3
NLK
DDX10
CLDN2
PI4KB
FGFBP2
AMBP
HNRNPL
BAMBI
ATXN1
RCAN1
TNS1
RNF170
OSBP
HOOK3
JPH2
LTBP1
ELOVL2
DMPK
RNPEPL1
ANKMY1
C3
RHOD
FRMD5
FOXN1
MTRNR2L6
TBXA2R
EXT2
MARCHF10
RHOBTB1
CALML5
EVI5L
NAIP
APOC3
SLC29A1
NR2F6
SDC1
PABPC1
ZBTB7A
FABP3
UBL4A
SLC10A3
ABCB8
RGS3
DLG4
ACADVL
OAZ3
MRPL9
RALGPS2
UBE2H
CALHM4
NTMT1
DLC1
ME3
FADD
ZMYND11
KRT13
BCL3
TOM1L2
FOXO6
DRC3
SNX10
HSFX3
EOLA1
HSPB1
OXT
C9orf50
PRSS22
SLC6A6
MTA1
HOMER2
PRDM4
ARFGEF2
FNIP2
ANXA2
KLRF2
ITPRIPL1
EHD1
CIC
ZNF746
PDLIM2
GATAD2A
MAPKAPK5
ITGB2
SSTR2
USP17L11
PMEPA1
RBM43
ZNF687
VWA1
PLCD3
ACBD4
ZNF552
TWF2
MEF2A
PPP2R5E
PABPN1
TSPAN5
USP17L18
SHCBP1L
FAM234B
ASPG
USP17L21
USP17L12
JARID2
TRPM7
ZBTB7B
SLC37A1
RABL6
C9orf139
ABCA2
ARHGEF10L
OPRL1
LKAAEAR1
ABCD3
NBPF12
FARSB
PCIF1
PAX9
FBH1
ANKRD16
TPBG
CRK
ZNFX1
POLDIP3
KAZN
ZSWIM6
ARHGAP29
TMEM107
ZNF385B
PTP4A2
SIRT4
AMOTL2
CDH11
BHLHE40
PTMA
ENTPD8
USP17L15
STC2
SETD2
LGR6
PALLD
LENG1
PAQR5
B3GNT3
ABCA3
HUWE1
RASEF
H3C15
H3C14
H2AC19
H2AC18
SH3GLB2
PADI3
EXOSC5
BCKDHA
MTUS1
FUS
EPPK1
UBE2I
RAI14
SLC19A1
GLRX5
RBBP5
SPATA9
RHOBTB3
PDCD6IP
TJP3
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
MIDN
NPIPB6
H4C15
H4C14
PAX4
KLF10
DNMBP
SH3YL1
ACP1
FECH
MICAL3
KHSRP
NFE2L1
UNC5B
S100P
H4C12
H4C11
SLC25A25
H2BC5
H1-4
BATF
RPS29
GJD3
PKIB
SH2D3C
ADD3
TTC21B
GPR153
ANAPC7
SRSF7
CYB561
ESRP2
SLC16A3
TM7SF2
LHX4
C1orf198
HOGA1
ANGEL1
KRT36
MEIS1
UFM1
TCF21
HSP90AB1
CACNA1H
INAVA
MAB21L4
ITGB3
KLRC3
TNK2
TRAF7
SASH3
MED12L
LAMB2
GPD1L
B2M
TMEM120A
DYSF
MOCS1
HSFX4
ENKUR
SEC14L5
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ZBTB5
SMAD3
ACBD6
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
IMPA2
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
ADCY9
PMF1-BGLAP
PMF1
IRF2BPL
EEF1A1
MYH11
TSN
RAB31
UBE2L3
TRIM2
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
AHCYL1
TOMM40
AKT1
ZFP37
PRSS8
PHF13
ZNF91
GAA
PKM
H4C3
H1-6
DDIT4
SBSPON
SEMA4G
ID1
DLL3
DCLK1
CASZ1
ZNF654
FAM187A
EFTUD2
CGGBP1
CCDC103
RPS27
RAB13
EIF3E
BLCAP
PCTP
SULT1A1
KCTD1
SLC11A2
RABL2B
GHRH
GADD45B
IVD
PPP2R3A
KRT24
CGN
SKP1
RP1
SP1
SLC25A6
C20orf204
IL17RB
CHDH
UPF2
STAM
APPL2
BCKDK
SLC27A2
NR0B2
LARP1
CACTIN
SLC7A2
TLE3
SUN5
BPIFB2
TRAF2
TANGO6
FBXO34
PROP1
MRPS18B
H2AX
SRSF2
MFSD11
TOB1
ZNF823
MBD6
DDIT3
SCD
ZBTB4
SLC35G6
POLR2A
C4orf19
HSPA9
H2BC21
H2AC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
SOCS3
RUNDC3B
H2BC12
H2AC12
NME6
WDR97
MAF1
PHACTR2
CCDC187
PKD2L2
EIF1
NCOA7
SHANK1
CLEC11A
RPLP1
PUM2
RAD23A
HP1BP3
SCAMP4
ADAT3
PROSER1
NHLRC3
NUP214
AHCY
ARRB1
WNT4
PDHX
APIP
FAM78B
ARRDC2
PLGRKT
JUND
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
CLPSL1
SRD5A1
RPL27
PTPRH
H1-7
RAB11B
SEC14L2
SESN1
RPS20
AP3M1
ADK
RABL2A
COL6A5
TBC1D10B
MYLPF
LOXL4
MT2A
P2RX2
SLC2A11
MACIR
CALM2
SBSN
GAPDHS
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
ADAMTS8
SLC35B1
GEMIN4
BASP1
RPLP0
NR2C1
MACROH2A1
NFKBIL1
EMP2
DDX39B
ATP6V1G2
OVOL1
H2BC11
H2AC11
MAT2A
CDH1
ACE
SEMA3F
COL18A1
RPS2
RORC
RNF151
CEBPD
BCAR3
ZC3H10
RPL41
LRIG2
LETM1
REXO1
CYP3A43
VIT
DCAF7
OR2T1
NME1-NME2
NME1
TMEM17
JUN
HADHB
HADHA
P2RX7
TMEM238
RPL28
ASGR2
UPK3A
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
PTPRN2
EEF2
BCAT1
NUDT9
ERG
JAKMIP1
IQGAP2
EOMES
DDB2
STAM2
PHF3
TRIP10
SYNGR1
GPR108
TTC8
SLC46A3
LUC7L2
FMC1-LUC7L2
FMC1
POFUT1
PLAGL2
CSRNP1
NGB
JUNB
SIMC1
GSTA4
TIAF1
S100A10
METTL16
CCR7
KLHL14
USP17L19
TCF7L2
RPS6
FILIP1L
WIZ
HEXIM1
CCNO
H2BC8
H2AC8
STIP1
MLPH
ID2
CHMP5
BAG1
TSPOAP1
PCGF2
TRIM45
OXCT2
LPIN1
LASP1
MVB12B
DENND1B
ZC2HC1C
TMEM60
PHTF2
OPRD1
BRD2
ACYP1
POLR3E
PIK3CD
NAT10
RNF149
RCC1
PRKACA
PMAIP1
NBPF15
ZCWPW1
TRIM16L
MEPCE
MS4A6E
GPAM
MIPOL1
CAPN13
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
USP53
TJP1
GPR137
TOR1AIP2
SMC2
DTNB
RBM17
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
PLEC
PLAGL1
SH2D4B
IER3
FLOT1
EIF4A1
CIRBP
STRIP1
PPFIBP2
MAGOH
H4C2
H3C2
ATXN7
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
FRAT2
COX5A
APTX
TMEM79
SMG5
RPL38
JAK1
ADPGK
RANBP2
CCNL1
BRAF
GNA12
KCNB2
TTI2
TRIM55
NFE2L2
MAP1B